RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W EHD3P28817 500 aa1.64□□□□□ -2.15
MSL1YIR009W DBP7P36120 742 aaKnown RBP1.64□□□□□ -2.15
MSL1YIR009W MRPL39P36533 70 aa1.64□□□□□ -2.15
MSL1YIR009W MRPS9P38120 278 aa1.64□□□□□ -2.15
MSL1YIR009W ARN2P38724 620 aa1.64□□□□□ -2.15
MSL1YIR009W GOS1P38736 223 aa1.64□□□□□ -2.15
MSL1YIR009W YHR127WP38833 243 aaKnown RBP1.64□□□□□ -2.15
MSL1YIR009W EDC2P40023 145 aaPredicted RBP1.64□□□□□ -2.15
MSL1YIR009W AVT6P40074 448 aa1.64□□□□□ -2.15
MSL1YIR009W RRG9P40156 214 aa1.64□□□□□ -2.15
MSL1YIR009W TRM9P49957 279 aa1.64□□□□□ -2.15
MSL1YIR009W CUS2P53830 285 aaPredicted RBP1.64□□□□□ -2.15
MSL1YIR009W YMR166CQ03829 368 aa1.64□□□□□ -2.15
MSL1YIR009W ECM11Q04110 302 aa1.64□□□□□ -2.15
MSL1YIR009W NNT1Q05874 261 aa1.64□□□□□ -2.15
MSL1YIR009W ECM19Q06011 112 aa1.64□□□□□ -2.15
MSL1YIR009W CDD1Q06549 142 aa1.64□□□□□ -2.15
MSL1YIR009W COQ10Q08058 207 aa1.64□□□□□ -2.15
MSL1YIR009W CLP1Q08685 445 aaPredicted RBP1.64□□□□□ -2.15
MSL1YIR009W YDL211CQ12121 372 aa1.64□□□□□ -2.15
MSL1YIR009W RFM1Q12192 310 aa1.64□□□□□ -2.15
MSL1YIR009W UTP20P35194 2493 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W YIL177CP40434 1758 aa1.63□□□□□ -2.15
MSL1YIR009W YJL225CP40889 1758 aa1.63□□□□□ -2.15
MSL1YIR009W ADH1P00330 348 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W COX5AP00424 153 aa1.63□□□□□ -2.15
MSL1YIR009W YPK2P18961 677 aa1.63□□□□□ -2.15
MSL1YIR009W COX10P21592 462 aa1.63□□□□□ -2.15
MSL1YIR009W RPB9P27999 122 aa1.63□□□□□ -2.15
MSL1YIR009W ERG2P32352 222 aa1.63□□□□□ -2.15
MSL1YIR009W GDH2P33327 1092 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W URA8P38627 578 aaPredicted RBP1.63□□□□□ -2.15
MSL1YIR009W ASP1P38986 381 aaPredicted RBP1.63□□□□□ -2.15
MSL1YIR009W FRT2P39734 528 aa1.63□□□□□ -2.15
MSL1YIR009W YMR144WP40214 342 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W ADO1P47143 340 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W NIF3P53081 288 aa1.63□□□□□ -2.15
MSL1YIR009W NSA1P53136 463 aaPredicted RBP1.63□□□□□ -2.15
MSL1YIR009W SLX9P53251 210 aaPredicted RBP1.63□□□□□ -2.15
MSL1YIR009W SPG4Q04438 115 aa1.63□□□□□ -2.15
MSL1YIR009W YMR226CQ05016 267 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W YLR179CQ06252 201 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W RRP40Q08285 240 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W YPR011CQ12251 326 aa1.63□□□□□ -2.15
MSL1YIR009W DFM1Q12743 341 aaKnown RBP1.63□□□□□ -2.15
MSL1YIR009W YBL008W-AQ3E821 79 aa1.63□□□□□ -2.15
MSL1YIR009W SWI1P09547 1314 aa1.63□□□□□ -2.15
MSL1YIR009W TY2B-BQ12491 1770 aa1.62□□□□□ -2.15
MSL1YIR009W AUS1Q08409 1394 aa1.62□□□□□ -2.15
MSL1YIR009W RPS19AP07280 144 aaKnown RBP1.62□□□□□ -2.15
MSL1YIR009W RPS19BP07281 144 aaPredicted RBP1.62□□□□□ -2.15
MSL1YIR009W RPL27AP0C2H6 136 aaKnown RBP1.62□□□□□ -2.15
MSL1YIR009W RPL27BP0C2H7 136 aaKnown RBP1.62□□□□□ -2.15
MSL1YIR009W RME1P32338 300 aaKnown RBP1.62□□□□□ -2.15
MSL1YIR009W ASF2P32448 525 aaPredicted RBP1.62□□□□□ -2.15
MSL1YIR009W SSO1P32867 290 aa1.62□□□□□ -2.15
MSL1YIR009W HMT1P38074 348 aa1.62□□□□□ -2.15
MSL1YIR009W BDH1P39714 382 aa1.62□□□□□ -2.15
MSL1YIR009W YER034WP40022 185 aaKnown RBP1.62□□□□□ -2.15
MSL1YIR009W YRB2P40517 327 aa1.62□□□□□ -2.15
MSL1YIR009W YRB1P41920 201 aaKnown RBP1.62□□□□□ -2.15
MSL1YIR009W LIF1P53150 421 aa1.62□□□□□ -2.15
MSL1YIR009W YPL039WQ03080 316 aa1.62□□□□□ -2.15
MSL1YIR009W GOT1Q03554 138 aa1.62□□□□□ -2.15
MSL1YIR009W MRX8Q05473 314 aa1.62□□□□□ -2.15
MSL1YIR009W YOL019WQ08157 551 aa1.62□□□□□ -2.15
MSL1YIR009W SLD7Q08457 257 aa1.62□□□□□ -2.15
MSL1YIR009W YPS3Q12303 508 aa1.62□□□□□ -2.15
MSL1YIR009W JLP1Q12358 412 aa1.62□□□□□ -2.15
MSL1YIR009W NUP188P52593 1655 aaKnown RBP1.61□□□□□ -2.15
MSL1YIR009W ROM2P51862 1356 aaKnown RBP1.61□□□□□ -2.15
MSL1YIR009W SNF2P22082 1703 aa1.61□□□□□ -2.15
MSL1YIR009W PHO80P20052 293 aa1.61□□□□□ -2.15
MSL1YIR009W RAD51P25454 400 aa1.61□□□□□ -2.15
MSL1YIR009W NTF2P33331 125 aaKnown RBP1.61□□□□□ -2.15
MSL1YIR009W TAF14P35189 244 aa1.61□□□□□ -2.15
MSL1YIR009W SYS1P41544 203 aa1.61□□□□□ -2.15
MSL1YIR009W UFE1P41834 346 aa1.61□□□□□ -2.15
MSL1YIR009W YFL012WP43580 148 aa1.61□□□□□ -2.15
MSL1YIR009W MIC19P43594 170 aa1.61□□□□□ -2.15
MSL1YIR009W HAM1P47119 197 aaKnown RBP1.61□□□□□ -2.15
MSL1YIR009W AAH1P53909 347 aa1.61□□□□□ -2.15
MSL1YIR009W DXO1Q06349 442 aa1.61□□□□□ -2.15
MSL1YIR009W YDL144CQ07589 356 aa1.61□□□□□ -2.15
MSL1YIR009W NCB2Q92317 146 aa1.61□□□□□ -2.15
MSL1YIR009W TY1B-JR2P47100 1755 aaKnown RBP1.61□□□□□ -2.15
MSL1YIR009W TY1B-ER2Q03619 1755 aa1.61□□□□□ -2.15
MSL1YIR009W TY1B-MR1Q04214 1755 aa1.61□□□□□ -2.15
MSL1YIR009W TY1B-MR2Q04670 1755 aaKnown RBP1.61□□□□□ -2.15
MSL1YIR009W TY1B-LR1Q12088 1755 aaKnown RBP1.61□□□□□ -2.15
MSL1YIR009W TY1B-NL1Q12112 1755 aa1.61□□□□□ -2.15
MSL1YIR009W TY1B-GR1Q12141 1755 aa1.61□□□□□ -2.15
MSL1YIR009W TY1B-BLQ12490 1755 aa1.61□□□□□ -2.15
MSL1YIR009W TPI1P00942 248 aaKnown RBP1.6□□□□□ -2.15
MSL1YIR009W CBP6P07253 162 aaPredicted RBP1.6□□□□□ -2.15
MSL1YIR009W RPL40AP0CH08 128 aaKnown RBP1.6□□□□□ -2.15
MSL1YIR009W RPL40BP0CH09 128 aaKnown RBP1.6□□□□□ -2.15
MSL1YIR009W URA6P15700 204 aa1.6□□□□□ -2.15
MSL1YIR009W DBF2P22204 572 aa1.6□□□□□ -2.15
MSL1YIR009W RFA3P26755 122 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 145 ms