RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W YBR182C-AQ8TGU6 64 aa5.81□□□□□ -1.48
NUP49YGL172W MET3P08536 511 aa5.8□□□□□ -1.48
NUP49YGL172W MTC7P32633 139 aa5.8□□□□□ -1.48
NUP49YGL172W PPZ2P33329 710 aa5.8□□□□□ -1.48
NUP49YGL172W YKL187CP34231 750 aa5.8□□□□□ -1.48
NUP49YGL172W FAT1P38225 669 aa5.8□□□□□ -1.48
NUP49YGL172W BUD8P41698 603 aa5.8□□□□□ -1.48
NUP49YGL172W QRI1P43123 477 aaKnown RBP5.8□□□□□ -1.48
NUP49YGL172W MRH4P53166 561 aa5.8□□□□□ -1.48
NUP49YGL172W ERV29P53337 310 aa5.8□□□□□ -1.48
NUP49YGL172W TIM10P87108 93 aa5.8□□□□□ -1.48
NUP49YGL172W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
NUP49YGL172W MEH1Q02205 184 aa5.8□□□□□ -1.48
NUP49YGL172W CTF19Q02732 369 aa5.8□□□□□ -1.48
NUP49YGL172W RPS23AP0CX29 145 aaKnown RBP5.79□□□□□ -1.48
NUP49YGL172W RPS23BP0CX30 145 aa5.79□□□□□ -1.48
NUP49YGL172W RFA1P22336 621 aaKnown RBP5.79□□□□□ -1.48
NUP49YGL172W HXT2P23585 541 aa5.79□□□□□ -1.48
NUP49YGL172W PET18P25362 215 aa5.79□□□□□ -1.48
NUP49YGL172W SHM2P37291 469 aaKnown RBP5.79□□□□□ -1.48
NUP49YGL172W UMP1P38293 148 aa5.79□□□□□ -1.48
NUP49YGL172W MBA1P38300 278 aa5.79□□□□□ -1.48
NUP49YGL172W ARC40P38328 384 aaKnown RBP5.79□□□□□ -1.48
NUP49YGL172W MSS4P38994 779 aa5.79□□□□□ -1.48
NUP49YGL172W YND1P40009 630 aa5.79□□□□□ -1.48
NUP49YGL172W GAT2P40209 560 aa5.79□□□□□ -1.48
NUP49YGL172W BNA1P47096 177 aa5.79□□□□□ -1.48
NUP49YGL172W SED1Q01589 338 aa5.79□□□□□ -1.48
NUP49YGL172W YKR005CQ02203 525 aa5.79□□□□□ -1.48
NUP49YGL172W YMR279CQ03263 540 aa5.79□□□□□ -1.48
NUP49YGL172W YTH1Q06102 208 aaPredicted RBP5.79□□□□□ -1.48
NUP49YGL172W YPR196WQ06595 470 aa5.79□□□□□ -1.48
NUP49YGL172W GAT3Q07928 141 aa5.79□□□□□ -1.48
NUP49YGL172W RFU1Q08003 200 aa5.79□□□□□ -1.48
NUP49YGL172W SRL2Q12020 392 aa5.79□□□□□ -1.48
NUP49YGL172W SAG1P20840 650 aa5.78□□□□□ -1.48
NUP49YGL172W DAL80P26343 269 aa5.78□□□□□ -1.48
NUP49YGL172W REC114P32841 428 aa5.78□□□□□ -1.48
NUP49YGL172W GLY1P37303 387 aaKnown RBP5.78□□□□□ -1.48
NUP49YGL172W HTD2P38790 280 aaKnown RBP5.78□□□□□ -1.48
NUP49YGL172W IPI1P38803 334 aaPredicted RBP5.78□□□□□ -1.48
NUP49YGL172W ECM14P38836 430 aa5.78□□□□□ -1.48
NUP49YGL172W BNA6P43619 295 aa5.78□□□□□ -1.48
NUP49YGL172W IRC18P47056 224 aa5.78□□□□□ -1.48
NUP49YGL172W VHT1P53241 593 aa5.78□□□□□ -1.48
NUP49YGL172W MOT3P54785 490 aaKnown RBP5.78□□□□□ -1.48
NUP49YGL172W YDC1Q02896 317 aa5.78□□□□□ -1.48
NUP49YGL172W DLT1Q04216 342 aa5.78□□□□□ -1.48
NUP49YGL172W YMR130WQ04223 302 aa5.78□□□□□ -1.48
NUP49YGL172W YPR098CQ06089 161 aa5.78□□□□□ -1.48
NUP49YGL172W RGC1Q06108 1083 aaKnown RBP5.78□□□□□ -1.48
NUP49YGL172W TPO3Q06451 622 aa5.78□□□□□ -1.48
NUP49YGL172W YOR283WQ12040 230 aaKnown RBP5.78□□□□□ -1.48
NUP49YGL172W YLR358CO13565 187 aa5.77□□□□□ -1.49
NUP49YGL172W RPL6BP05739 176 aaKnown RBP5.77□□□□□ -1.49
NUP49YGL172W YBL010CP32788 280 aa5.77□□□□□ -1.49
NUP49YGL172W HPA3P39979 161 aa5.77□□□□□ -1.49
NUP49YGL172W SMB1P40018 196 aaKnown RBP5.77□□□□□ -1.49
NUP49YGL172W FCY21P40039 528 aa5.77□□□□□ -1.49
NUP49YGL172W YER079WP40052 210 aaKnown RBP5.77□□□□□ -1.49
NUP49YGL172W SYS1P41544 203 aa5.77□□□□□ -1.49
NUP49YGL172W GPI14P47088 403 aaKnown RBP5.77□□□□□ -1.49
NUP49YGL172W BXI1P48558 297 aa5.77□□□□□ -1.49
NUP49YGL172W NSA1P53136 463 aaPredicted RBP5.77□□□□□ -1.49
NUP49YGL172W YGR042WP53227 271 aa5.77□□□□□ -1.49
NUP49YGL172W FMP48P53233 369 aa5.77□□□□□ -1.49
NUP49YGL172W MRX9Q07349 420 aaKnown RBP5.77□□□□□ -1.49
NUP49YGL172W TMC1Q08422 150 aaPredicted RBP5.77□□□□□ -1.49
NUP49YGL172W INP53Q12271 1107 aa5.77□□□□□ -1.49
NUP49YGL172W HUT1Q12520 339 aa5.77□□□□□ -1.49
NUP49YGL172W ODC2Q99297 307 aa5.77□□□□□ -1.49
NUP49YGL172W REP2P03872 296 aa5.76□□□□□ -1.49
NUP49YGL172W ARO4P32449 370 aaKnown RBP5.76□□□□□ -1.49
NUP49YGL172W YKL063CP35725 167 aa5.76□□□□□ -1.49
NUP49YGL172W YER121WP40076 114 aa5.76□□□□□ -1.49
NUP49YGL172W YIL060WP40519 144 aa5.76□□□□□ -1.49
NUP49YGL172W EGT2P42835 1041 aa5.76□□□□□ -1.49
NUP49YGL172W IMD3P50095 523 aaKnown RBP5.76□□□□□ -1.49
NUP49YGL172W PML1Q07930 204 aaPredicted RBP5.76□□□□□ -1.49
NUP49YGL172W YPL199CQ08954 240 aa5.76□□□□□ -1.49
NUP49YGL172W CDC28P00546 298 aaKnown RBP5.75□□□□□ -1.49
NUP49YGL172W MNS1P32906 549 aa5.75□□□□□ -1.49
NUP49YGL172W CAT5P41735 233 aa5.75□□□□□ -1.49
NUP49YGL172W PUS4P48567 403 aaKnown RBP5.75□□□□□ -1.49
NUP49YGL172W NCE103P53615 221 aa5.75□□□□□ -1.49
NUP49YGL172W YDR248CQ03786 193 aa5.75□□□□□ -1.49
NUP49YGL172W YLR108CQ12259 485 aa5.75□□□□□ -1.49
NUP49YGL172W RPL25P04456 142 aaKnown RBP5.74□□□□□ -1.49
NUP49YGL172W RPL39P04650 51 aa5.74□□□□□ -1.49
NUP49YGL172W YML003WP0CF16 290 aa5.74□□□□□ -1.49
NUP49YGL172W HNM1P19807 563 aa5.74□□□□□ -1.49
NUP49YGL172W SPT14P32363 452 aa5.74□□□□□ -1.49
NUP49YGL172W NPL6P32832 435 aa5.74□□□□□ -1.49
NUP49YGL172W VAM7P32912 316 aa5.74□□□□□ -1.49
NUP49YGL172W NAT2P37293 288 aa5.74□□□□□ -1.49
NUP49YGL172W SSN8P47821 323 aa5.74□□□□□ -1.49
NUP49YGL172W UFD1P53044 361 aa5.74□□□□□ -1.49
NUP49YGL172W TY1A-MR1Q04215 440 aa5.74□□□□□ -1.49
NUP49YGL172W HNT1Q04344 158 aaKnown RBP5.74□□□□□ -1.49
NUP49YGL172W YDR114CQ04597 100 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms