RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	MID1	P41821	548 aa		11.52	□□□□□ -0.57
TIR1	YER011W	SKP1	P52286	194 aa		11.52	□□□□□ -0.57
TIR1	YER011W	YNL046W	P53956	172 aa		11.52	□□□□□ -0.57
TIR1	YER011W	TMC1	Q08422	150 aa	Predicted RBP	11.52	□□□□□ -0.57
TIR1	YER011W	YOR186W	Q08560	144 aa		11.52	□□□□□ -0.57
TIR1	YER011W	EAF3	Q12432	401 aa		11.52	□□□□□ -0.57
TIR1	YER011W	HTZ1	Q12692	134 aa	Known RBP	11.52	□□□□□ -0.57
TIR1	YER011W	GPM1	P00950	247 aa	Known RBP	11.51	□□□□□ -0.57
TIR1	YER011W	GCD1	P09032	578 aa	Predicted RBP	11.51	□□□□□ -0.57
TIR1	YER011W	RPL3	P14126	387 aa	Known RBP	11.51	□□□□□ -0.57
TIR1	YER011W	PEX4	P29340	183 aa		11.51	□□□□□ -0.57
TIR1	YER011W	HYM1	P32464	399 aa		11.51	□□□□□ -0.57
TIR1	YER011W	UTP15	Q04305	513 aa	Known RBP	11.51	□□□□□ -0.57
TIR1	YER011W	YMR254C	Q04838	102 aa		11.51	□□□□□ -0.57
TIR1	YER011W	PHO92	Q06390	306 aa		11.51	□□□□□ -0.57
TIR1	YER011W	RPS31	P05759	152 aa	Known RBP	11.5	□□□□□ -0.57
TIR1	YER011W	PET54	P10834	293 aa		11.5	□□□□□ -0.57
TIR1	YER011W	ZUO1	P32527	433 aa	Known RBP	11.5	□□□□□ -0.57
TIR1	YER011W	RPS0B	P46654	252 aa	Known RBP	11.5	□□□□□ -0.57
TIR1	YER011W	ARO8	P53090	500 aa	Known RBP	11.5	□□□□□ -0.57
TIR1	YER011W	GMC1	Q04399	608 aa		11.5	□□□□□ -0.57
TIR1	YER011W	YLR031W	Q07978	186 aa		11.5	□□□□□ -0.57
TIR1	YER011W	FCY22	Q12119	530 aa		11.5	□□□□□ -0.57
TIR1	YER011W	WSC3	Q12215	556 aa		11.5	□□□□□ -0.57
TIR1	YER011W	YLR108C	Q12259	485 aa		11.5	□□□□□ -0.57
TIR1	YER011W	RPL39	P04650	51 aa		11.49	□□□□□ -0.57
TIR1	YER011W	RNP1	P32385	249 aa		11.49	□□□□□ -0.57
TIR1	YER011W	LNP1	P38878	278 aa		11.49	□□□□□ -0.57
TIR1	YER011W	AIM25	P47140	327 aa		11.49	□□□□□ -0.57
TIR1	YER011W	PEF1	P53238	335 aa		11.49	□□□□□ -0.57
TIR1	YER011W	TY1A-MR1	Q04215	440 aa		11.49	□□□□□ -0.57
TIR1	YER011W	GRC3	Q07845	632 aa		11.49	□□□□□ -0.57
TIR1	YER011W	MPD1	Q12404	318 aa	Known RBP	11.49	□□□□□ -0.57
TIR1	YER011W	TDH2	P00358	332 aa	Known RBP	11.48	□□□□□ -0.57
TIR1	YER011W	RFA1	P22336	621 aa	Known RBP	11.48	□□□□□ -0.57
TIR1	YER011W	YCR101C	P25607	182 aa		11.48	□□□□□ -0.57
TIR1	YER011W	IMP1	P28627	190 aa		11.48	□□□□□ -0.57
TIR1	YER011W	RMD6	P39975	231 aa		11.48	□□□□□ -0.57
TIR1	YER011W	GLR1	P41921	483 aa	Known RBP	11.48	□□□□□ -0.57
TIR1	YER011W	MRX5	P47007	382 aa		11.48	□□□□□ -0.57
TIR1	YER011W	GWT1	P47026	490 aa		11.48	□□□□□ -0.57
TIR1	YER011W	SBH2	P52871	88 aa		11.48	□□□□□ -0.57
TIR1	YER011W	YPL067C	Q02754	198 aa		11.48	□□□□□ -0.57
TIR1	YER011W	PET122	P10355	254 aa		11.47	□□□□□ -0.57
TIR1	YER011W	IFM1	P25038	676 aa		11.47	□□□□□ -0.57
TIR1	YER011W	RIB7	P33312	244 aa		11.47	□□□□□ -0.57
TIR1	YER011W	YDR114C	Q04597	100 aa		11.47	□□□□□ -0.57
TIR1	YER011W	PRS2	P38620	318 aa	Known RBP	11.46	□□□□□ -0.57
TIR1	YER011W	YKE4	P40544	346 aa		11.46	□□□□□ -0.57
TIR1	YER011W	YIL012W	P40551	113 aa		11.46	□□□□□ -0.57
TIR1	YER011W	GON7	P46984	123 aa		11.46	□□□□□ -0.57
TIR1	YER011W	BNA2	P47125	453 aa		11.46	□□□□□ -0.57
TIR1	YER011W	TEX1	P53851	422 aa	Known RBP	11.46	□□□□□ -0.57
TIR1	YER011W	GIM3	P53900	129 aa		11.46	□□□□□ -0.57
TIR1	YER011W	TY1A-DR2	Q03964	440 aa	Known RBP	11.46	□□□□□ -0.57
TIR1	YER011W	SPO24	Q3E752	67 aa		11.46	□□□□□ -0.57
TIR1	YER011W	AAC1	P04710	309 aa		11.45	□□□□□ -0.58
TIR1	YER011W	AGA2	P32781	87 aa		11.45	□□□□□ -0.58
TIR1	YER011W	CCS1	P40202	249 aa	Known RBP	11.45	□□□□□ -0.58
TIR1	YER011W	PRM15	Q03262	622 aa		11.45	□□□□□ -0.58
TIR1	YER011W	UPS1	Q05776	175 aa		11.45	□□□□□ -0.58
TIR1	YER011W	SNA4	Q07549	140 aa		11.45	□□□□□ -0.58
TIR1	YER011W	Q0297	Q9ZZV8	51 aa		11.45	□□□□□ -0.58
TIR1	YER011W	YLL053C	P0CD98	152 aa		11.44	□□□□□ -0.58
TIR1	YER011W	CDC23	P16522	626 aa		11.44	□□□□□ -0.58
TIR1	YER011W	ERG3	P32353	365 aa		11.44	□□□□□ -0.58
TIR1	YER011W	FIG1	P38224	298 aa		11.44	□□□□□ -0.58
TIR1	YER011W	YHL044W	P38727	235 aa		11.44	□□□□□ -0.58
TIR1	YER011W	OSH7	P38755	437 aa		11.44	□□□□□ -0.58
TIR1	YER011W	DMA2	P53924	522 aa		11.44	□□□□□ -0.58
TIR1	YER011W	WHI5	Q12416	295 aa		11.44	□□□□□ -0.58
TIR1	YER011W	YCP4	P25349	247 aa	Known RBP	11.43	□□□□□ -0.58
TIR1	YER011W	MRPL27	P36526	146 aa	Predicted RBP	11.43	□□□□□ -0.58
TIR1	YER011W	CTR2	P38865	189 aa		11.43	□□□□□ -0.58
TIR1	YER011W	SLM1	P40485	686 aa		11.43	□□□□□ -0.58
TIR1	YER011W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	11.43	□□□□□ -0.58	not detected
TIR1	YER011W	RSM27	P53305	110 aa		11.43	□□□□□ -0.58
TIR1	YER011W	ATG40	Q99325	256 aa		11.43	□□□□□ -0.58
TIR1	YER011W	SPS2	P08459	502 aa		11.42	□□□□□ -0.58
TIR1	YER011W	VMA3	P25515	160 aa		11.42	□□□□□ -0.58
TIR1	YER011W	YCL042W	P25572	119 aa		11.42	□□□□□ -0.58
TIR1	YER011W	MSE1	P48525	536 aa		11.42	□□□□□ -0.58
TIR1	YER011W	HNT2	P49775	206 aa		11.42	□□□□□ -0.58
TIR1	YER011W	RPA14	P50106	137 aa		11.42	□□□□□ -0.58
TIR1	YER011W	INN1	P53901	409 aa		11.42	□□□□□ -0.58
TIR1	YER011W	YOR385W	Q08909	290 aa		11.42	□□□□□ -0.58
TIR1	YER011W	NCA3	P46955	337 aa		11.41	□□□□□ -0.58
TIR1	YER011W	YML018C	Q03730	393 aa		11.41	□□□□□ -0.58
TIR1	YER011W	CAC2	Q04199	468 aa		11.41	□□□□□ -0.58
TIR1	YER011W	LIP2	Q06005	328 aa		11.41	□□□□□ -0.58
TIR1	YER011W	ENV7	Q12003	364 aa		11.41	□□□□□ -0.58
TIR1	YER011W	RTR2	Q12378	196 aa		11.41	□□□□□ -0.58
TIR1	YER011W	URA3	P03962	267 aa		11.4	□□□□□ -0.58
TIR1	YER011W	OCH1	P31755	480 aa		11.4	□□□□□ -0.58
TIR1	YER011W	FMT1	P32785	401 aa		11.4	□□□□□ -0.58
TIR1	YER011W	FLO10	P36170	1169 aa		11.4	□□□□□ -0.58
TIR1	YER011W	EDS1	P38073	919 aa		11.4	□□□□□ -0.58
TIR1	YER011W	SWD3	P38123	315 aa		11.4	□□□□□ -0.58
TIR1	YER011W	YBR242W	P38331	238 aa		11.4	□□□□□ -0.58
TIR1	YER011W	YJR011C	P47086	261 aa	Predicted RBP	11.4	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms