RNA–Protein interactions for RNA: YDR525W

API2, Transcript of Dubious open reading frame, yeast

Gene API2, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
API2	YDR525W	RRS1	Q08746	203 aa	Known RBP	3.57	□□□□□ -1.84
API2	YDR525W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
API2	YDR525W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
API2	YDR525W	HIS3	P06633	220 aa		3.56	□□□□□ -1.84
API2	YDR525W	SGA1	P08019	549 aa		3.56	□□□□□ -1.84
API2	YDR525W	DEG1	P31115	442 aa	Known RBP	3.56	□□□□□ -1.84
API2	YDR525W	AFG1	P32317	509 aa		3.56	□□□□□ -1.84
API2	YDR525W	DBF20	P32328	564 aa		3.56	□□□□□ -1.84
API2	YDR525W	RSM22	P36056	628 aa		3.56	□□□□□ -1.84
API2	YDR525W	MRPL36	P36531	177 aa		3.56	□□□□□ -1.84
API2	YDR525W	PRS3	P38689	320 aa	Known RBP	3.56	□□□□□ -1.84
API2	YDR525W	DLS1	P40366	167 aa		3.56	□□□□□ -1.84
API2	YDR525W	UBC13	P52490	153 aa		3.56	□□□□□ -1.84
API2	YDR525W	NSA1	P53136	463 aa	Predicted RBP	3.56	□□□□□ -1.84
API2	YDR525W	MRH4	P53166	561 aa		3.56	□□□□□ -1.84
API2	YDR525W	CRZ1	P53968	678 aa		3.56	□□□□□ -1.84
API2	YDR525W	SNA4	Q07549	140 aa		3.56	□□□□□ -1.84
API2	YDR525W	PML1	Q07930	204 aa	Predicted RBP	3.56	□□□□□ -1.84
API2	YDR525W	NGL1	Q08213	363 aa	Known RBP	3.56	□□□□□ -1.84
API2	YDR525W	RKI1	Q12189	258 aa		3.56	□□□□□ -1.84
API2	YDR525W	IES3	Q12345	250 aa		3.56	□□□□□ -1.84
API2	YDR525W	Q0297	Q9ZZV8	51 aa		3.56	□□□□□ -1.84
API2	YDR525W	RPL6B	P05739	176 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	CDC31	P06704	161 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	RPS23A	P0CX29	145 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	RPS23B	P0CX30	145 aa		3.55	□□□□□ -1.84
API2	YDR525W	RPL35A	P0CX84	120 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	RPL35B	P0CX85	120 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	RPL30	P14120	105 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	SAG1	P20840	650 aa		3.55	□□□□□ -1.84
API2	YDR525W	DPB2	P24482	689 aa	Predicted RBP	3.55	□□□□□ -1.84
API2	YDR525W	YOX1	P34161	385 aa		3.55	□□□□□ -1.84
API2	YDR525W	UTP11	P34247	250 aa	Predicted RBP	3.55	□□□□□ -1.84
API2	YDR525W	TMA19	P35691	167 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	MCH2	P36032	473 aa		3.55	□□□□□ -1.84
API2	YDR525W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
API2	YDR525W	FAT1	P38225	669 aa		3.55	□□□□□ -1.84
API2	YDR525W	MBA1	P38300	278 aa		3.55	□□□□□ -1.84
API2	YDR525W	ARC40	P38328	384 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	SSH1	P38353	490 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	YHK8	P38776	514 aa		3.55	□□□□□ -1.84
API2	YDR525W	YIL029C	P40538	142 aa		3.55	□□□□□ -1.84
API2	YDR525W	EGT2	P42835	1041 aa		3.55	□□□□□ -1.84
API2	YDR525W	POP6	P53218	158 aa		3.55	□□□□□ -1.84
API2	YDR525W	YGR054W	P53235	642 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	SCW4	P53334	386 aa	Known RBP	3.55	□□□□□ -1.84
API2	YDR525W	PXR1	P53335	271 aa	Predicted RBP	3.55	□□□□□ -1.84
API2	YDR525W	YNR048W	P53740	393 aa		3.55	□□□□□ -1.84
API2	YDR525W	RNH201	P53942	307 aa		3.55	□□□□□ -1.84
API2	YDR525W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
API2	YDR525W	CIK1	Q01649	594 aa		3.55	□□□□□ -1.84
API2	YDR525W	YPL077C	Q02831	240 aa		3.55	□□□□□ -1.84
API2	YDR525W	YDC1	Q02896	317 aa		3.55	□□□□□ -1.84
API2	YDR525W	MGR3	Q04472	501 aa		3.55	□□□□□ -1.84
API2	YDR525W	PEX30	Q06169	523 aa		3.55	□□□□□ -1.84
API2	YDR525W	SSK1	Q07084	712 aa		3.55	□□□□□ -1.84
API2	YDR525W	RFU1	Q08003	200 aa		3.55	□□□□□ -1.84
API2	YDR525W	TMC1	Q08422	150 aa	Predicted RBP	3.55	□□□□□ -1.84
API2	YDR525W	MSH5	Q12175	901 aa		3.55	□□□□□ -1.84
API2	YDR525W	HUT1	Q12520	339 aa		3.55	□□□□□ -1.84
API2	YDR525W	GCN4	P03069	281 aa		3.54	□□□□□ -1.84
API2	YDR525W	REP1	P03871	373 aa		3.54	□□□□□ -1.84
API2	YDR525W	RPS18A	P0CX55	146 aa	Known RBP	3.54	□□□□□ -1.84
API2	YDR525W	RPS18B	P0CX56	146 aa	Predicted RBP	3.54	□□□□□ -1.84
API2	YDR525W	MSI1	P13712	422 aa		3.54	□□□□□ -1.84
API2	YDR525W	ARO3	P14843	370 aa	Known RBP	3.54	□□□□□ -1.84
API2	YDR525W	PET18	P25362	215 aa		3.54	□□□□□ -1.84
API2	YDR525W	CNE1	P27825	502 aa		3.54	□□□□□ -1.84
API2	YDR525W	PEX4	P29340	183 aa		3.54	□□□□□ -1.84
API2	YDR525W	ARO4	P32449	370 aa	Known RBP	3.54	□□□□□ -1.84
API2	YDR525W	AGA2	P32781	87 aa		3.54	□□□□□ -1.84
API2	YDR525W	MNS1	P32906	549 aa		3.54	□□□□□ -1.84
API2	YDR525W	SNC2	P33328	115 aa		3.54	□□□□□ -1.84
API2	YDR525W	TCM62	P38228	572 aa	Known RBP	3.54	□□□□□ -1.84
API2	YDR525W	ECM14	P38836	430 aa		3.54	□□□□□ -1.84
API2	YDR525W	YND1	P40009	630 aa		3.54	□□□□□ -1.84
API2	YDR525W	FCY21	P40039	528 aa		3.54	□□□□□ -1.84
API2	YDR525W	YIL012W	P40551	113 aa		3.54	□□□□□ -1.84
API2	YDR525W	GLR1	P41921	483 aa	Known RBP	3.54	□□□□□ -1.84
API2	YDR525W	ATG18	P43601	500 aa		3.54	□□□□□ -1.84
API2	YDR525W	YJL016W	P47072	561 aa		3.54	□□□□□ -1.84
API2	YDR525W	YJR096W	P47137	282 aa		3.54	□□□□□ -1.84
API2	YDR525W	TAF4	P50105	388 aa		3.54	□□□□□ -1.84
API2	YDR525W	CWC23	P52868	283 aa	Predicted RBP	3.54	□□□□□ -1.84
API2	YDR525W	ERV29	P53337	310 aa		3.54	□□□□□ -1.84
API2	YDR525W	NRK1	P53915	240 aa		3.54	□□□□□ -1.84
API2	YDR525W	YNL046W	P53956	172 aa		3.54	□□□□□ -1.84
API2	YDR525W	BUD25	P85052	153 aa		3.54	□□□□□ -1.84
API2	YDR525W	SRL4	Q03085	281 aa		3.54	□□□□□ -1.84
API2	YDR525W	TDA1	Q03533	586 aa		3.54	□□□□□ -1.84
API2	YDR525W	YPR098C	Q06089	161 aa		3.54	□□□□□ -1.84
API2	YDR525W	ORM2	Q06144	216 aa		3.54	□□□□□ -1.84
API2	YDR525W	TPO3	Q06451	622 aa		3.54	□□□□□ -1.84
API2	YDR525W	PEX27	Q08580	376 aa		3.54	□□□□□ -1.84
API2	YDR525W	USB1	Q12208	290 aa	Known RBP	3.54	□□□□□ -1.84
API2	YDR525W	INP53	Q12271	1107 aa		3.54	□□□□□ -1.84
API2	YDR525W	SUS1	Q6WNK7	96 aa		3.54	□□□□□ -1.84
API2	YDR525W	CDC28	P00546	298 aa	Known RBP	3.53	□□□□□ -1.84
API2	YDR525W	CHO1	P08456	276 aa		3.53	□□□□□ -1.84
API2	YDR525W	CLB2	P24869	491 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 169.9 ms