RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS23, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS23YDR246W YOR385WQ08909 290 aa4.41□□□□□ -1.7
TRS23YDR246W YPL272CQ08984 517 aa4.41□□□□□ -1.7
TRS23YDR246W PRP46Q12417 451 aaPredicted RBP4.41□□□□□ -1.7
TRS23YDR246W YOR343CQ12484 108 aa4.41□□□□□ -1.7
TRS23YDR246W ODC2Q99297 307 aa4.41□□□□□ -1.7
TRS23YDR246W POL2P21951 2222 aaKnown RBP4.41□□□□□ -1.7
TRS23YDR246W CHO1P08456 276 aa4.4□□□□□ -1.71
TRS23YDR246W RPL1AP0CX43 217 aaKnown RBP4.4□□□□□ -1.71
TRS23YDR246W RPL1BP0CX44 217 aaKnown RBP4.4□□□□□ -1.71
TRS23YDR246W MATALPHA1P0CY06 175 aa4.4□□□□□ -1.71
TRS23YDR246W HMLALPHA1P0CY07 175 aa4.4□□□□□ -1.71
TRS23YDR246W SEC22P22214 214 aa4.4□□□□□ -1.71
TRS23YDR246W STE50P25344 346 aa4.4□□□□□ -1.71
TRS23YDR246W YCR006CP25350 157 aa4.4□□□□□ -1.71
TRS23YDR246W CWP1P28319 239 aa4.4□□□□□ -1.71
TRS23YDR246W CAM1P29547 415 aaKnown RBP4.4□□□□□ -1.71
TRS23YDR246W SUA5P32579 426 aa4.4□□□□□ -1.71
TRS23YDR246W GRE3P38715 327 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
TRS23YDR246W SWM2P40342 146 aa4.4□□□□□ -1.71
TRS23YDR246W AVT7P40501 490 aa4.4□□□□□ -1.71
TRS23YDR246W YIL086CP40503 102 aa4.4□□□□□ -1.71
TRS23YDR246W YIL067CP40514 678 aa4.4□□□□□ -1.71
TRS23YDR246W SYS1P41544 203 aa4.4□□□□□ -1.71
TRS23YDR246W LOH1P47055 219 aa4.4□□□□□ -1.71
TRS23YDR246W HAM1P47119 197 aaKnown RBP4.4□□□□□ -1.71
TRS23YDR246W YJR111CP47148 283 aaKnown RBP4.4□□□□□ -1.71
TRS23YDR246W TRM9P49957 279 aa4.4□□□□□ -1.71
TRS23YDR246W OKP1P53298 406 aa4.4□□□□□ -1.71
TRS23YDR246W PDR16P53860 351 aaKnown RBP4.4□□□□□ -1.71
TRS23YDR246W YLR460CP54007 376 aa4.4□□□□□ -1.71
TRS23YDR246W YLR152CP54072 576 aa4.4□□□□□ -1.71
TRS23YDR246W PET191Q02772 108 aa4.4□□□□□ -1.71
TRS23YDR246W ANT1Q06497 328 aa4.4□□□□□ -1.71
TRS23YDR246W BSC6Q08280 497 aa4.4□□□□□ -1.71
TRS23YDR246W SKM1Q12469 655 aa4.4□□□□□ -1.71
TRS23YDR246W ARF1P11076 181 aaKnown RBP4.39□□□□□ -1.71
TRS23YDR246W FUS3P16892 353 aaKnown RBP4.39□□□□□ -1.71
TRS23YDR246W PET18P25362 215 aa4.39□□□□□ -1.71
TRS23YDR246W CPR3P25719 182 aa4.39□□□□□ -1.71
TRS23YDR246W FAA1P30624 700 aaKnown RBP4.39□□□□□ -1.71
TRS23YDR246W MRP20P32387 263 aa4.39□□□□□ -1.71
TRS23YDR246W FMT1P32785 401 aa4.39□□□□□ -1.71
TRS23YDR246W EMP24P32803 203 aaKnown RBP4.39□□□□□ -1.71
TRS23YDR246W CBT1P36038 271 aaPredicted RBP4.39□□□□□ -1.71
TRS23YDR246W SRP102P36057 244 aaPredicted RBP4.39□□□□□ -1.71
TRS23YDR246W MRPL27P36526 146 aaPredicted RBP4.39□□□□□ -1.71
TRS23YDR246W MRPL36P36531 177 aa4.39□□□□□ -1.71
TRS23YDR246W BMT5P40493 336 aa4.39□□□□□ -1.71
TRS23YDR246W CIN2P46670 268 aa4.39□□□□□ -1.71
TRS23YDR246W MTM1P53320 366 aa4.39□□□□□ -1.71
TRS23YDR246W RHO5P53879 331 aaKnown RBP4.39□□□□□ -1.71
TRS23YDR246W RPL15BP54780 204 aaPredicted RBP4.39□□□□□ -1.71
TRS23YDR246W YDR249CQ03787 373 aa4.39□□□□□ -1.71
TRS23YDR246W SNX41Q04053 625 aa4.39□□□□□ -1.71
TRS23YDR246W YLR108CQ12259 485 aa4.39□□□□□ -1.71
TRS23YDR246W EAF3Q12432 401 aa4.39□□□□□ -1.71
TRS23YDR246W RRI1Q12468 440 aa4.39□□□□□ -1.71
TRS23YDR246W YJR112W-AQ3E743 109 aa4.39□□□□□ -1.71
TRS23YDR246W YHR213W-AQ8TGT4 77 aa4.39□□□□□ -1.71
TRS23YDR246W CTA1P15202 515 aa4.38□□□□□ -1.71
TRS23YDR246W URA6P15700 204 aa4.38□□□□□ -1.71
TRS23YDR246W HNM1P19807 563 aa4.38□□□□□ -1.71
TRS23YDR246W HXT2P23585 541 aa4.38□□□□□ -1.71
TRS23YDR246W CNB1P25296 175 aa4.38□□□□□ -1.71
TRS23YDR246W ADH7P25377 361 aa4.38□□□□□ -1.71
TRS23YDR246W SNC2P33328 115 aa4.38□□□□□ -1.71
TRS23YDR246W PAN3P36102 679 aaPredicted RBP4.38□□□□□ -1.71
TRS23YDR246W MRPL15P36523 253 aa4.38□□□□□ -1.71
TRS23YDR246W SSH1P38353 490 aaKnown RBP4.38□□□□□ -1.71
TRS23YDR246W PUG1P40100 303 aa4.38□□□□□ -1.71
TRS23YDR246W DLS1P40366 167 aa4.38□□□□□ -1.71
TRS23YDR246W GLR1P41921 483 aaKnown RBP4.38□□□□□ -1.71
TRS23YDR246W SPG5P42933 373 aa4.38□□□□□ -1.71
TRS23YDR246W YHC3P47040 408 aa4.38□□□□□ -1.71
TRS23YDR246W BXI1P48558 297 aa4.38□□□□□ -1.71
TRS23YDR246W UBP8P50102 471 aa4.38□□□□□ -1.71
TRS23YDR246W YGL159WP53110 370 aa4.38□□□□□ -1.71
TRS23YDR246W RMD9P53140 646 aaKnown RBP4.38□□□□□ -1.71
TRS23YDR246W YGR066CP53242 292 aa4.38□□□□□ -1.71
TRS23YDR246W RVB1Q03940 463 aaKnown RBP4.38□□□□□ -1.71
TRS23YDR246W IRC19Q07843 230 aa4.38□□□□□ -1.71
TRS23YDR246W GRC3Q07845 632 aa4.38□□□□□ -1.71
TRS23YDR246W YRA1Q12159 226 aaKnown RBP4.38□□□□□ -1.71
TRS23YDR246W TFC7Q12415 435 aa4.38□□□□□ -1.71
TRS23YDR246W GLK1P17709 500 aaKnown RBP4.37□□□□□ -1.71
TRS23YDR246W AIM17P23180 465 aaKnown RBP4.37□□□□□ -1.71
TRS23YDR246W SCO1P23833 295 aa4.37□□□□□ -1.71
TRS23YDR246W MEK1P24719 497 aaPredicted RBP4.37□□□□□ -1.71
TRS23YDR246W KRR1P25586 316 aaPredicted RBP4.37□□□□□ -1.71
TRS23YDR246W TIP1P27654 210 aaPredicted RBP4.37□□□□□ -1.71
TRS23YDR246W AGA2P32781 87 aa4.37□□□□□ -1.71
TRS23YDR246W PDC2P32896 925 aa4.37□□□□□ -1.71
TRS23YDR246W SEF1P34228 1148 aa4.37□□□□□ -1.71
TRS23YDR246W OM14P38325 134 aa4.37□□□□□ -1.71
TRS23YDR246W BFR1P38934 470 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
TRS23YDR246W SSO2P39926 295 aa4.37□□□□□ -1.71
TRS23YDR246W ERJ5P43613 295 aaPredicted RBP4.37□□□□□ -1.71
TRS23YDR246W GIM3P53900 129 aa4.37□□□□□ -1.71
TRS23YDR246W SAM50P53969 484 aa4.37□□□□□ -1.71
TRS23YDR246W ERV25P54837 211 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms