RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN1	YDR233C	RCN1	P36054	211 aa		3.15	□□□□□ -1.91
RTN1	YDR233C	MSA2	P36157	363 aa		3.15	□□□□□ -1.91
RTN1	YDR233C	YER085C	P40058	173 aa		3.15	□□□□□ -1.91
RTN1	YDR233C	YLR030W	Q07967	263 aa		3.15	□□□□□ -1.91
RTN1	YDR233C	BBP1	Q12365	385 aa		3.15	□□□□□ -1.91
RTN1	YDR233C	YCF1	P39109	1515 aa	Known RBP	3.14	□□□□□ -1.91
RTN1	YDR233C	TOP2	P06786	1428 aa	Known RBP	3.14	□□□□□ -1.91
RTN1	YDR233C	CLB6	P32943	380 aa		3.14	□□□□□ -1.91
RTN1	YDR233C	OST2	P46964	130 aa		3.14	□□□□□ -1.91
RTN1	YDR233C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
RTN1	YDR233C	MSA1	Q08471	629 aa		3.14	□□□□□ -1.91
RTN1	YDR233C	YLR126C	Q12288	251 aa		3.14	□□□□□ -1.91
RTN1	YDR233C	YLR462W	O13556	202 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	ERD2	P18414	219 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	YGP1	P38616	354 aa	Known RBP	3.13	□□□□□ -1.91
RTN1	YDR233C	YEL075C	P39972	122 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	SMD3	P43321	101 aa	Known RBP	3.13	□□□□□ -1.91
RTN1	YDR233C	YGL159W	P53110	370 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	SLM2	P53955	656 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	RGM1	Q00453	211 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	SPO77	Q06134	477 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	SUE1	Q06524	206 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	CDD1	Q06549	142 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	YPR172W	Q06608	200 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	SAS5	Q99314	248 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	STU1	P38198	1513 aa		3.13	□□□□□ -1.91
RTN1	YDR233C	SMC4	Q12267	1418 aa		3.12	□□□□□ -1.91
RTN1	YDR233C	CHD1	P32657	1468 aa		3.12	□□□□□ -1.91
RTN1	YDR233C	YOR1	P53049	1477 aa		3.12	□□□□□ -1.91
RTN1	YDR233C	MRPL25	P23369	157 aa		3.12	□□□□□ -1.91
RTN1	YDR233C	SRB4	P32569	687 aa		3.12	□□□□□ -1.91
RTN1	YDR233C	RPC17	P47076	161 aa		3.12	□□□□□ -1.91
RTN1	YDR233C	DSK2	P48510	373 aa		3.12	□□□□□ -1.91
RTN1	YDR233C	SCO1	P23833	295 aa		3.11	□□□□□ -1.91
RTN1	YDR233C	YJR149W	P47177	404 aa		3.11	□□□□□ -1.91
RTN1	YDR233C	COS6	P53344	381 aa		3.11	□□□□□ -1.91
RTN1	YDR233C	FAR8	Q05040	523 aa		3.11	□□□□□ -1.91
RTN1	YDR233C	RKR1	Q04781	1562 aa		3.11	□□□□□ -1.91
RTN1	YDR233C	YHR139C-A	O13536	103 aa		3.1	□□□□□ -1.91
RTN1	YDR233C	RHO1	P06780	209 aa	Known RBP	3.1	□□□□□ -1.91
RTN1	YDR233C	SNA3	P14359	133 aa		3.1	□□□□□ -1.91
RTN1	YDR233C	ERG24	P32462	438 aa	Known RBP	3.1	□□□□□ -1.91
RTN1	YDR233C	VPS21	P36017	210 aa	Known RBP	3.1	□□□□□ -1.91
RTN1	YDR233C	COS8	P38723	381 aa		3.1	□□□□□ -1.91
RTN1	YDR233C	YHL026C	P38740	315 aa		3.1	□□□□□ -1.91
RTN1	YDR233C	RTR1	P40084	226 aa	Predicted RBP	3.1	□□□□□ -1.91
RTN1	YDR233C	MRPL49	P40858	161 aa	Predicted RBP	3.1	□□□□□ -1.91
RTN1	YDR233C	TIM11	P81449	96 aa	Predicted RBP	3.1	□□□□□ -1.91
RTN1	YDR233C	MMS22	Q06164	1454 aa		3.09	□□□□□ -1.91
RTN1	YDR233C	COX5A	P00424	153 aa		3.09	□□□□□ -1.91
RTN1	YDR233C	NTF2	P33331	125 aa	Known RBP	3.09	□□□□□ -1.91
RTN1	YDR233C	CTR2	P38865	189 aa		3.09	□□□□□ -1.91
RTN1	YDR233C	YMR144W	P40214	342 aa	Known RBP	3.09	□□□□□ -1.91
RTN1	YDR233C	TRM9	P49957	279 aa		3.09	□□□□□ -1.91
RTN1	YDR233C	RNH1	Q04740	348 aa		3.09	□□□□□ -1.91
RTN1	YDR233C	INM2	Q05533	292 aa		3.09	□□□□□ -1.91
RTN1	YDR233C	SPP41	P38904	1435 aa		3.09	□□□□□ -1.92
RTN1	YDR233C	MYO4	P32492	1471 aa		3.09	□□□□□ -1.92
RTN1	YDR233C	CDC25	P04821	1589 aa		3.08	□□□□□ -1.92
RTN1	YDR233C	Q0255	P03881	472 aa		3.08	□□□□□ -1.92
RTN1	YDR233C	YHR032W-A	P0C5N6	59 aa		3.08	□□□□□ -1.92
RTN1	YDR233C	TOS8	P53147	276 aa		3.08	□□□□□ -1.92
RTN1	YDR233C	GTR2	P53290	341 aa		3.08	□□□□□ -1.92
RTN1	YDR233C	TRM732	Q03496	1420 aa		3.08	□□□□□ -1.92
RTN1	YDR233C	CCA1	P21269	546 aa		3.07	□□□□□ -1.92
RTN1	YDR233C	SCM4	P32564	187 aa		3.07	□□□□□ -1.92
RTN1	YDR233C	YHR125W	P38831	101 aa		3.07	□□□□□ -1.92
RTN1	YDR233C	ARC15	P40518	154 aa	RIP-Chip data	3.07	□□□□□ -1.92	not detected
RTN1	YDR233C	OTU1	P43558	301 aa		3.07	□□□□□ -1.92
RTN1	YDR233C	CGI121	Q03705	181 aa	Known RBP	3.07	□□□□□ -1.92
RTN1	YDR233C	TSC11	P40061	1430 aa		3.07	□□□□□ -1.92
RTN1	YDR233C	SNF6	P18888	332 aa		3.06	□□□□□ -1.92
RTN1	YDR233C	CDC10	P25342	322 aa	Known RBP	3.06	□□□□□ -1.92
RTN1	YDR233C	BMH2	P34730	273 aa	Known RBP	3.06	□□□□□ -1.92
RTN1	YDR233C	CUE1	P38428	203 aa		3.06	□□□□□ -1.92
RTN1	YDR233C	RPA43	P46669	326 aa		3.06	□□□□□ -1.92
RTN1	YDR233C	SNX4	P47057	423 aa		3.06	□□□□□ -1.92
RTN1	YDR233C	DCR2	Q05924	578 aa		3.06	□□□□□ -1.92
RTN1	YDR233C	DNF1	P32660	1571 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	MET5	P47169	1442 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	IPP1	P00817	287 aa	Known RBP	3.05	□□□□□ -1.92
RTN1	YDR233C	BCY1	P07278	416 aa	Known RBP	3.05	□□□□□ -1.92
RTN1	YDR233C	DSF1	P0CX08	502 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	YNR073C	P0CX09	502 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	YPT52	P36018	234 aa	Known RBP	3.05	□□□□□ -1.92
RTN1	YDR233C	URA8	P38627	578 aa	Predicted RBP	3.05	□□□□□ -1.92
RTN1	YDR233C	RTC3	P38804	111 aa	Predicted RBP	3.05	□□□□□ -1.92
RTN1	YDR233C	PEX17	P40155	199 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	CAT5	P41735	233 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	MNN5	P46982	586 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	MCM22	P47167	239 aa		3.05	□□□□□ -1.92
RTN1	YDR233C	VTH1	P40438	1549 aa		3.04	□□□□□ -1.92
RTN1	YDR233C	VTH2	P40890	1549 aa		3.04	□□□□□ -1.92
RTN1	YDR233C	SIR4	P11978	1358 aa		3.04	□□□□□ -1.92
RTN1	YDR233C	MIC12	P38341	106 aa		3.04	□□□□□ -1.92
RTN1	YDR233C	RMR1	P53060	241 aa		3.04	□□□□□ -1.92
RTN1	YDR233C	NIP7	Q08962	181 aa	Known RBP	3.04	□□□□□ -1.92
RTN1	YDR233C	HTL1	Q9URQ5	78 aa		3.04	□□□□□ -1.92
RTN1	YDR233C	THP2	O13539	261 aa	Known RBP	3.03	□□□□□ -1.92
RTN1	YDR233C	ARG80	P07249	177 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms