RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	RTT103	Q05543	409 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	SEI1	Q06058	285 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	MIM1	Q08176	113 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	DAP1	Q12091	152 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	FCY22	Q12119	530 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	HMS1	Q12398	434 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	ISA2	Q12425	185 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	AGC1	Q12482	902 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	YHR213W-A	Q8TGT4	77 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	UBR1	P19812	1950 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	CHO1	P08456	276 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	RPL35A	P0CX84	120 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	RPL35B	P0CX85	120 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	PET18	P25362	215 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	MCM10	P32354	571 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	HSP150	P32478	413 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	MKK2	P32491	506 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	SIP1	P32578	815 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	MTC7	P32633	139 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	EMP70	P32802	667 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	RPS0A	P32905	252 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	SRY1	P36007	326 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	CBT1	P36038	271 aa	Predicted RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	ATP3	P38077	311 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	ECM31	P38122	312 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	ERV15	P38312	142 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	YBR292C	P38357	123 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	PRS3	P38689	320 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	RTC3	P38804	111 aa	Predicted RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	YHR210C	P38893	341 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	RMD6	P39975	231 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	POG1	P40473	351 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	CUP9	P41817	306 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	HXT14	P42833	540 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	YHC3	P47040	408 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	YJR056C	P47115	236 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	PUS4	P48567	403 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	SLX9	P53251	210 aa	Predicted RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	MPP6	P53725	186 aa	Predicted RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	RSM28	Q03430	361 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	CGI121	Q03705	181 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	YMR090W	Q04304	227 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	FIT1	Q04433	528 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	YLR456W	Q06199	204 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	YPR147C	Q06522	304 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	YOL029C	Q08187	201 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	YOR385W	Q08909	290 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	USB1	Q12208	290 aa	Known RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	SME1	Q12330	94 aa	Predicted RBP	2.95	□□□□□ -1.94
PSF1	YDR013W	ATP14	Q12349	124 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	TFC7	Q12415	435 aa		2.95	□□□□□ -1.94
PSF1	YDR013W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
PSF1	YDR013W	MES1	P00958	751 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	CDC7	P06243	507 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	YML003W	P0CF16	290 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	ARO3	P14843	370 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	FRS1	P15624	595 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	HNM1	P19807	563 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	ERG8	P24521	451 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	EHD3	P28817	500 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	TRR1	P29509	319 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	RPD3	P32561	433 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	MRPL4	P36517	319 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	MRPL27	P36526	146 aa	Predicted RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	FIG1	P38224	298 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	RPP1	P38786	293 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	CHS7	P38843	316 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	PEX7	P39108	375 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	YIL086C	P40503	102 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	QRI1	P43123	477 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	AGX1	P43567	385 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	DUG1	P43616	481 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	YFR054C	P43622	192 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	ADO1	P47143	340 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	YIP4	P53093	235 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	LCL3	P53153	274 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	YCL001W-A	P87012	153 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
PSF1	YDR013W	VPS28	Q02767	242 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	ATG21	Q02887	496 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	SDC1	Q03323	175 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	CAC2	Q04199	468 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	GMC1	Q04399	608 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	MRPL1	Q04599	285 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	HRI1	Q05905	244 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	GAS2	Q06135	555 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	DXO1	Q06349	442 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	MRX9	Q07349	420 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	PRP11	Q07350	266 aa	Predicted RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	YOR376W	Q08900	122 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	NIP7	Q08962	181 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	TGS1	Q12052	315 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	YCT1	Q12235	531 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	YOR343C	Q12484	108 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	PAR32	Q12515	295 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	SET6	Q12529	373 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	LSO2	Q3E772	92 aa	Known RBP	2.94	□□□□□ -1.94
PSF1	YDR013W	ISN1	Q99312	450 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	ATG40	Q99325	256 aa		2.94	□□□□□ -1.94
PSF1	YDR013W	OPI3	P05375	206 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms