RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W YPL272CQ08984 517 aa2.99□□□□□ -1.93
NUP60YAR002W YGL194C-AQ2V2P6 80 aa2.99□□□□□ -1.93
NUP60YAR002W ODC2Q99297 307 aa2.99□□□□□ -1.93
NUP60YAR002W CSF1Q12150 2958 aa2.99□□□□□ -1.93
NUP60YAR002W YAL064W-BO13512 126 aa2.98□□□□□ -1.93
NUP60YAR002W SCEIP03882 235 aa2.98□□□□□ -1.93
NUP60YAR002W PHO2P07269 559 aa2.98□□□□□ -1.93
NUP60YAR002W SGA1P08019 549 aa2.98□□□□□ -1.93
NUP60YAR002W PUT1P09368 476 aa2.98□□□□□ -1.93
NUP60YAR002W DAL82P21705 255 aa2.98□□□□□ -1.93
NUP60YAR002W HXT2P23585 541 aa2.98□□□□□ -1.93
NUP60YAR002W ADH7P25377 361 aa2.98□□□□□ -1.93
NUP60YAR002W CAM1P29547 415 aaKnown RBP2.98□□□□□ -1.93
NUP60YAR002W MCM10P32354 571 aa2.98□□□□□ -1.93
NUP60YAR002W PTI1P39927 425 aaPredicted RBP2.98□□□□□ -1.93
NUP60YAR002W SER3P40054 469 aa2.98□□□□□ -1.93
NUP60YAR002W ERJ5P43613 295 aaPredicted RBP2.98□□□□□ -1.93
NUP60YAR002W CIN2P46670 268 aa2.98□□□□□ -1.93
NUP60YAR002W LSM1P47017 172 aaKnown RBP2.98□□□□□ -1.93
NUP60YAR002W PGU1P47180 361 aa2.98□□□□□ -1.93
NUP60YAR002W JAC1P53193 184 aa2.98□□□□□ -1.93
NUP60YAR002W YGR066CP53242 292 aa2.98□□□□□ -1.93
NUP60YAR002W AAH1P53909 347 aa2.98□□□□□ -1.93
NUP60YAR002W KAP120Q02932 1032 aa2.98□□□□□ -1.93
NUP60YAR002W YPL039WQ03080 316 aa2.98□□□□□ -1.93
NUP60YAR002W CGI121Q03705 181 aaKnown RBP2.98□□□□□ -1.93
NUP60YAR002W YDR102CQ03864 110 aa2.98□□□□□ -1.93
NUP60YAR002W RVB1Q03940 463 aaKnown RBP2.98□□□□□ -1.93
NUP60YAR002W HNT1Q04344 158 aaKnown RBP2.98□□□□□ -1.93
NUP60YAR002W FEX1Q08913 375 aa2.98□□□□□ -1.93
NUP60YAR002W NIP7Q08962 181 aaKnown RBP2.98□□□□□ -1.93
NUP60YAR002W FAS1P07149 2051 aaKnown RBP2.98□□□□□ -1.93
NUP60YAR002W YHR214C-DP0CX93 97 aa2.97□□□□□ -1.93
NUP60YAR002W SPO7P18410 259 aa2.97□□□□□ -1.93
NUP60YAR002W HNM1P19807 563 aa2.97□□□□□ -1.93
NUP60YAR002W MAG1P22134 296 aaKnown RBP2.97□□□□□ -1.93
NUP60YAR002W YCR061WP25639 631 aa2.97□□□□□ -1.93
NUP60YAR002W SUA5P32579 426 aa2.97□□□□□ -1.93
NUP60YAR002W COS9P36034 407 aa2.97□□□□□ -1.93
NUP60YAR002W PAN3P36102 679 aaPredicted RBP2.97□□□□□ -1.93
NUP60YAR002W FLO10P36170 1169 aa2.97□□□□□ -1.93
NUP60YAR002W MRPL27P36526 146 aaPredicted RBP2.97□□□□□ -1.93
NUP60YAR002W NAT2P37293 288 aa2.97□□□□□ -1.93
NUP60YAR002W GRE3P38715 327 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
NUP60YAR002W SHO1P40073 367 aa2.97□□□□□ -1.93
NUP60YAR002W PUG1P40100 303 aa2.97□□□□□ -1.93
NUP60YAR002W SLZ1P40167 298 aa2.97□□□□□ -1.93
NUP60YAR002W REE1P40893 198 aa2.97□□□□□ -1.93
NUP60YAR002W OCA1P50946 238 aaPredicted RBP2.97□□□□□ -1.93
NUP60YAR002W BSC5P53755 489 aa2.97□□□□□ -1.93
NUP60YAR002W PDR16P53860 351 aaKnown RBP2.97□□□□□ -1.93
NUP60YAR002W TIM11P81449 96 aaPredicted RBP2.97□□□□□ -1.93
NUP60YAR002W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
NUP60YAR002W ATG21Q02887 496 aa2.97□□□□□ -1.93
NUP60YAR002W GRE1Q08969 168 aa2.97□□□□□ -1.93
NUP60YAR002W AKR2Q12013 749 aa2.97□□□□□ -1.93
NUP60YAR002W SRL2Q12020 392 aa2.97□□□□□ -1.93
NUP60YAR002W YRM1Q12340 786 aa2.97□□□□□ -1.93
NUP60YAR002W RRI1Q12468 440 aa2.97□□□□□ -1.93
NUP60YAR002W PRM4Q12498 284 aa2.97□□□□□ -1.93
NUP60YAR002W YHR214C-EQ8TGK0 99 aa2.97□□□□□ -1.93
NUP60YAR002W TOR2P32600 2474 aaKnown RBP2.97□□□□□ -1.93
NUP60YAR002W YBR085C-AO43137 85 aa2.97□□□□□ -1.93
NUP60YAR002W YPT1P01123 206 aaKnown RBP2.97□□□□□ -1.93
NUP60YAR002W AAC1P04710 309 aa2.97□□□□□ -1.93
NUP60YAR002W NAM2P11325 894 aa2.97□□□□□ -1.93
NUP60YAR002W PDX1P16451 410 aa2.97□□□□□ -1.93
NUP60YAR002W CPR4P25334 318 aa2.97□□□□□ -1.93
NUP60YAR002W ARO4P32449 370 aaKnown RBP2.97□□□□□ -1.93
NUP60YAR002W FMT1P32785 401 aa2.97□□□□□ -1.93
NUP60YAR002W APD1P38281 316 aa2.97□□□□□ -1.93
NUP60YAR002W UMP1P38293 148 aa2.97□□□□□ -1.93
NUP60YAR002W ARO9P38840 513 aaPredicted RBP2.97□□□□□ -1.93
NUP60YAR002W YMR144WP40214 342 aaKnown RBP2.97□□□□□ -1.93
NUP60YAR002W IDP2P41939 412 aa2.97□□□□□ -1.93
NUP60YAR002W MSY1P48527 492 aa2.97□□□□□ -1.93
NUP60YAR002W UBC12P52491 188 aa2.97□□□□□ -1.93
NUP60YAR002W OKP1P53298 406 aa2.97□□□□□ -1.93
NUP60YAR002W NRK1P53915 240 aa2.97□□□□□ -1.93
NUP60YAR002W RNH201P53942 307 aa2.97□□□□□ -1.93
NUP60YAR002W ACS1Q01574 713 aa2.97□□□□□ -1.93
NUP60YAR002W HOF1Q05080 669 aa2.97□□□□□ -1.93
NUP60YAR002W AEP3Q12089 606 aa2.97□□□□□ -1.93
NUP60YAR002W MCT1Q12283 360 aa2.97□□□□□ -1.93
NUP60YAR002W ATP14Q12349 124 aa2.97□□□□□ -1.93
NUP60YAR002W YOR032W-AQ8TGS1 66 aa2.97□□□□□ -1.93
NUP60YAR002W PET20Q99373 253 aa2.97□□□□□ -1.93
NUP60YAR002W HFA1P32874 2273 aa2.96□□□□□ -1.94
NUP60YAR002W PCL1P24867 279 aa2.96□□□□□ -1.94
NUP60YAR002W VMA5P31412 392 aaKnown RBP2.96□□□□□ -1.94
NUP60YAR002W AFG1P32317 509 aa2.96□□□□□ -1.94
NUP60YAR002W MRP20P32387 263 aa2.96□□□□□ -1.94
NUP60YAR002W PPZ2P33329 710 aa2.96□□□□□ -1.94
NUP60YAR002W MRPL36P36531 177 aa2.96□□□□□ -1.94
NUP60YAR002W OM14P38325 134 aa2.96□□□□□ -1.94
NUP60YAR002W BFR1P38934 470 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94 RIP-Chip
NUP60YAR002W UME6P39001 836 aa2.96□□□□□ -1.94
NUP60YAR002W TAD2P47058 250 aa2.96□□□□□ -1.94
NUP60YAR002W YGL117WP53133 265 aa2.96□□□□□ -1.94
NUP60YAR002W SDC1Q03323 175 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms