RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C SUR2P38992 349 aa5.03□□□□□ -1.6
YTH1YPR107C NIF3P53081 288 aa5.03□□□□□ -1.6
YTH1YPR107C SYC1Q08553 188 aaPredicted RBP5.03□□□□□ -1.6
YTH1YPR107C NUP157P40064 1391 aaKnown RBP5.03□□□□□ -1.6
YTH1YPR107C RIB1P38066 345 aa5.02□□□□□ -1.61
YTH1YPR107C SPL2P38839 148 aa5.02□□□□□ -1.61
YTH1YPR107C YPL039WQ03080 316 aa5.02□□□□□ -1.61
YTH1YPR107C SMT3Q12306 101 aaKnown RBP5.02□□□□□ -1.61
YTH1YPR107C YBL008W-AQ3E821 79 aa5.02□□□□□ -1.61
YTH1YPR107C CDC10P25342 322 aaKnown RBP5.01□□□□□ -1.61
YTH1YPR107C GDH2P33327 1092 aaKnown RBP5.01□□□□□ -1.61
YTH1YPR107C SSH1P38353 490 aaKnown RBP5.01□□□□□ -1.61
YTH1YPR107C TEM1P38987 245 aa5.01□□□□□ -1.61
YTH1YPR107C YFR045WP43617 309 aa5.01□□□□□ -1.61
YTH1YPR107C CPR7P47103 393 aa5.01□□□□□ -1.61
YTH1YPR107C MIC26P50087 233 aa5.01□□□□□ -1.61
YTH1YPR107C PRR2Q12310 699 aa5.01□□□□□ -1.61
YTH1YPR107C PRP18P33411 251 aaPredicted RBP5□□□□□ -1.61
YTH1YPR107C RTC3P38804 111 aaPredicted RBP5□□□□□ -1.61
YTH1YPR107C YMR144WP40214 342 aaKnown RBP5□□□□□ -1.61
YTH1YPR107C SEI1Q06058 285 aa5□□□□□ -1.61
YTH1YPR107C YLR126CQ12288 251 aa5□□□□□ -1.61
YTH1YPR107C PAN1P32521 1480 aa5□□□□□ -1.61
YTH1YPR107C CCH1P50077 2039 aa4.99□□□□□ -1.61
YTH1YPR107C JIP3O13555 125 aa4.99□□□□□ -1.61
YTH1YPR107C CDC33P07260 213 aaKnown RBP4.99□□□□□ -1.61
YTH1YPR107C BCY1P07278 416 aaKnown RBP4.99□□□□□ -1.61
YTH1YPR107C AST1P35183 429 aa4.99□□□□□ -1.61
YTH1YPR107C URA8P38627 578 aaPredicted RBP4.99□□□□□ -1.61
YTH1YPR107C ERG28P40030 148 aa4.99□□□□□ -1.61
YTH1YPR107C RAD17P48581 401 aa4.99□□□□□ -1.61
YTH1YPR107C YMR226CQ05016 267 aaKnown RBP4.99□□□□□ -1.61
YTH1YPR107C YPR063CQ12160 140 aa4.99□□□□□ -1.61
YTH1YPR107C SFC1P33303 322 aa4.98□□□□□ -1.61
YTH1YPR107C ECO1P43605 281 aa4.98□□□□□ -1.61
YTH1YPR107C YJL028WP47062 111 aa4.98□□□□□ -1.61
YTH1YPR107C MCM22P47167 239 aa4.98□□□□□ -1.61
YTH1YPR107C NSA1P53136 463 aaPredicted RBP4.98□□□□□ -1.61
YTH1YPR107C MRPS17Q03246 237 aaPredicted RBP4.98□□□□□ -1.61
YTH1YPR107C CDC123Q05791 360 aa4.98□□□□□ -1.61
YTH1YPR107C SLD7Q08457 257 aa4.98□□□□□ -1.61
YTH1YPR107C YOR186WQ08560 144 aa4.98□□□□□ -1.61
YTH1YPR107C YKL183C-AQ3E765 70 aa4.98□□□□□ -1.61
YTH1YPR107C SPT3P06844 337 aa4.97□□□□□ -1.61
YTH1YPR107C CBT1P36038 271 aaPredicted RBP4.97□□□□□ -1.61
YTH1YPR107C SLX1P38324 304 aa4.97□□□□□ -1.61
YTH1YPR107C OST3P48439 350 aa4.97□□□□□ -1.61
YTH1YPR107C ALG9P53868 555 aaKnown RBP4.97□□□□□ -1.61
YTH1YPR107C SSQ1Q05931 657 aaPredicted RBP4.97□□□□□ -1.61
YTH1YPR107C YBL112CQ3E7Y4 105 aa4.97□□□□□ -1.61
YTH1YPR107C ZWF1P11412 505 aaKnown RBP4.96□□□□□ -1.62
YTH1YPR107C NTF2P33331 125 aaKnown RBP4.96□□□□□ -1.62
YTH1YPR107C CAB3P36076 571 aa4.96□□□□□ -1.62
YTH1YPR107C BUD13P46947 266 aaPredicted RBP4.96□□□□□ -1.62
YTH1YPR107C YDR222WQ04925 415 aa4.96□□□□□ -1.62
YTH1YPR107C YOL019WQ08157 551 aa4.96□□□□□ -1.62
YTH1YPR107C TIM22Q12328 207 aa4.96□□□□□ -1.62
YTH1YPR107C PST1Q12355 444 aa4.96□□□□□ -1.62
YTH1YPR107C SNA3P14359 133 aa4.95□□□□□ -1.62
YTH1YPR107C TRM9P49957 279 aa4.95□□□□□ -1.62
YTH1YPR107C MIG2P53035 382 aa4.95□□□□□ -1.62
YTH1YPR107C YMR114CQ04471 368 aaKnown RBP4.95□□□□□ -1.62
YTH1YPR107C HEM25Q07534 307 aa4.95□□□□□ -1.62
YTH1YPR107C DCN1Q12395 269 aa4.95□□□□□ -1.62
YTH1YPR107C TKL2P33315 681 aa4.94□□□□□ -1.62
YTH1YPR107C ECM13P38195 257 aa4.94□□□□□ -1.62
YTH1YPR107C YNL194CP40169 301 aa4.94□□□□□ -1.62
YTH1YPR107C RFC4P40339 323 aaKnown RBP4.94□□□□□ -1.62
YTH1YPR107C YIL059CP40520 121 aa4.94□□□□□ -1.62
YTH1YPR107C GIM3P53900 129 aa4.94□□□□□ -1.62
YTH1YPR107C YNL046WP53956 172 aa4.94□□□□□ -1.62
YTH1YPR107C EMI1Q04406 187 aa4.94□□□□□ -1.62
YTH1YPR107C GET4Q12125 312 aa4.94□□□□□ -1.62
YTH1YPR107C RPL28P02406 149 aaKnown RBP4.93□□□□□ -1.62
YTH1YPR107C YER189WP40104 122 aa4.93□□□□□ -1.62
YTH1YPR107C FYV6P53913 173 aa4.93□□□□□ -1.62
YTH1YPR107C IES4Q08561 116 aa4.93□□□□□ -1.62
YTH1YPR107C YPR011CQ12251 326 aa4.93□□□□□ -1.62
YTH1YPR107C RNP1P32385 249 aa4.92□□□□□ -1.62
YTH1YPR107C CWC23P52868 283 aaPredicted RBP4.92□□□□□ -1.62
YTH1YPR107C YGL034CP53186 121 aa4.92□□□□□ -1.62
YTH1YPR107C CUS2P53830 285 aaPredicted RBP4.92□□□□□ -1.62
YTH1YPR107C JLP1Q12358 412 aa4.92□□□□□ -1.62
YTH1YPR107C MRX4Q12467 430 aa4.92□□□□□ -1.62
YTH1YPR107C YPL247CQ12523 523 aa4.92□□□□□ -1.62
YTH1YPR107C ERD2P18414 219 aa4.91□□□□□ -1.62
YTH1YPR107C PPH21P23594 369 aa4.91□□□□□ -1.62
YTH1YPR107C ECM14P38836 430 aa4.91□□□□□ -1.62
YTH1YPR107C ILM1P47155 203 aa4.91□□□□□ -1.62
YTH1YPR107C YJR149WP47177 404 aa4.91□□□□□ -1.62
YTH1YPR107C ATG38Q05789 226 aaKnown RBP4.91□□□□□ -1.62
YTH1YPR107C TPO4Q12256 659 aa4.91□□□□□ -1.62
YTH1YPR107C SAC3P46674 1301 aa4.91□□□□□ -1.62
YTH1YPR107C IDH1P28834 360 aaKnown RBP RIP-Chip data4.9□□□□□ -1.63not detected
YTH1YPR107C NUP57P48837 541 aa4.9□□□□□ -1.63
YTH1YPR107C YRA1Q12159 226 aaKnown RBP4.9□□□□□ -1.63
YTH1YPR107C EMP46Q12396 444 aa4.9□□□□□ -1.63
YTH1YPR107C SIR4P11978 1358 aa4.9□□□□□ -1.63
YTH1YPR107C URA6P15700 204 aa4.89□□□□□ -1.63
YTH1YPR107C PRX1P34227 261 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 102.1 ms