RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C VAM3Q12241 283 aa3.52□□□□□ -1.85
SNF8YPL002C RTR2Q12378 196 aa3.52□□□□□ -1.85
SNF8YPL002C YBR126W-AQ8TGU7 68 aa3.52□□□□□ -1.85
SNF8YPL002C ISN1Q99312 450 aa3.52□□□□□ -1.85
SNF8YPL002C RPL24AP04449 155 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C RPL27AP0C2H6 136 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C RPL27BP0C2H7 136 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C MRP2P10663 115 aaPredicted RBP3.51□□□□□ -1.85
SNF8YPL002C SNF6P18888 332 aa3.51□□□□□ -1.85
SNF8YPL002C DBR1P24309 405 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C ERV1P27882 189 aa3.51□□□□□ -1.85
SNF8YPL002C PEX3P28795 441 aa3.51□□□□□ -1.85
SNF8YPL002C VMA6P32366 345 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C SOF1P33750 489 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C YNL208WP40159 199 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C GAB1P41733 394 aa3.51□□□□□ -1.85
SNF8YPL002C NCA3P46955 337 aa3.51□□□□□ -1.85
SNF8YPL002C SIP18P50263 79 aa3.51□□□□□ -1.85
SNF8YPL002C IMA1P53051 589 aa3.51□□□□□ -1.85
SNF8YPL002C NSA1P53136 463 aaPredicted RBP3.51□□□□□ -1.85
SNF8YPL002C PNC1P53184 216 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C ORM1P53224 222 aa3.51□□□□□ -1.85
SNF8YPL002C OKP1P53298 406 aa3.51□□□□□ -1.85
SNF8YPL002C COS6P53344 381 aa3.51□□□□□ -1.85
SNF8YPL002C IGO1P53897 168 aa3.51□□□□□ -1.85
SNF8YPL002C YNL010WP53981 241 aaKnown RBP3.51□□□□□ -1.85
SNF8YPL002C SKO1Q02100 647 aa3.51□□□□□ -1.85
SNF8YPL002C YDC1Q02896 317 aa3.51□□□□□ -1.85
SNF8YPL002C IRC19Q07843 230 aa3.51□□□□□ -1.85
SNF8YPL002C BSC1Q12140 328 aa3.51□□□□□ -1.85
SNF8YPL002C HMS1Q12398 434 aa3.51□□□□□ -1.85
SNF8YPL002C SPE4Q12455 300 aa3.51□□□□□ -1.85
SNF8YPL002C SNF8Q12483 233 aa3.51□□□□□ -1.85
SNF8YPL002C SET6Q12529 373 aa3.51□□□□□ -1.85
SNF8YPL002C YKL068W-AQ3E826 78 aa3.51□□□□□ -1.85
SNF8YPL002C MRP13P12686 339 aa3.5□□□□□ -1.85
SNF8YPL002C MSI1P13712 422 aa3.5□□□□□ -1.85
SNF8YPL002C UGA1P17649 471 aa3.5□□□□□ -1.85
SNF8YPL002C YIL029CP40538 142 aa3.5□□□□□ -1.85
SNF8YPL002C MET28P40573 187 aa3.5□□□□□ -1.85
SNF8YPL002C EGT2P42835 1041 aa3.5□□□□□ -1.85
SNF8YPL002C RMD9P53140 646 aaKnown RBP3.5□□□□□ -1.85
SNF8YPL002C YGR126WP53274 230 aa3.5□□□□□ -1.85
SNF8YPL002C MRP51Q02950 344 aa3.5□□□□□ -1.85
SNF8YPL002C MMT1Q03218 510 aa3.5□□□□□ -1.85
SNF8YPL002C PRM15Q03262 622 aa3.5□□□□□ -1.85
SNF8YPL002C CSM4Q08955 156 aa3.5□□□□□ -1.85
SNF8YPL002C ATP16Q12165 160 aa3.5□□□□□ -1.85
SNF8YPL002C TDH2P00358 332 aaKnown RBP3.49□□□□□ -1.85
SNF8YPL002C TDH3P00359 332 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SNF8YPL002C QCR2P07257 368 aa3.49□□□□□ -1.85
SNF8YPL002C NHP6BP11633 99 aaKnown RBP3.49□□□□□ -1.85
SNF8YPL002C ZRC1P20107 442 aa3.49□□□□□ -1.85
SNF8YPL002C SCO1P23833 295 aa3.49□□□□□ -1.85
SNF8YPL002C MDH3P32419 343 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SNF8YPL002C MNS1P32906 549 aa3.49□□□□□ -1.85
SNF8YPL002C AST1P35183 429 aa3.49□□□□□ -1.85
SNF8YPL002C FRE2P36033 711 aa3.49□□□□□ -1.85
SNF8YPL002C YKL071WP36086 256 aa3.49□□□□□ -1.85
SNF8YPL002C MRPL4P36517 319 aa3.49□□□□□ -1.85
SNF8YPL002C YBL029WP38201 376 aa3.49□□□□□ -1.85
SNF8YPL002C ZTA1P38230 334 aaKnown RBP3.49□□□□□ -1.85
SNF8YPL002C AME1P38313 324 aa3.49□□□□□ -1.85
SNF8YPL002C ECM34P38728 170 aa3.49□□□□□ -1.85
SNF8YPL002C SYG1P40528 902 aa3.49□□□□□ -1.85
SNF8YPL002C PTR3P43606 678 aa3.49□□□□□ -1.85
SNF8YPL002C ATG27P46989 271 aa3.49□□□□□ -1.85
SNF8YPL002C RPA34P47006 233 aaPredicted RBP3.49□□□□□ -1.85
SNF8YPL002C YGL204CP53089 101 aa3.49□□□□□ -1.85
SNF8YPL002C YGL159WP53110 370 aa3.49□□□□□ -1.85
SNF8YPL002C MTQ1P53944 314 aa3.49□□□□□ -1.85
SNF8YPL002C YHC1Q05900 231 aaKnown RBP3.49□□□□□ -1.85
SNF8YPL002C CTS2Q06350 511 aa3.49□□□□□ -1.85
SNF8YPL002C PIN3Q06449 215 aa3.49□□□□□ -1.85
SNF8YPL002C YFH1Q07540 174 aa3.49□□□□□ -1.85
SNF8YPL002C DCI1Q08558 271 aa3.49□□□□□ -1.85
SNF8YPL002C NIP7Q08962 181 aaKnown RBP3.49□□□□□ -1.85
SNF8YPL002C YPR202WQ08993 238 aa3.49□□□□□ -1.85
SNF8YPL002C RNH203Q12338 110 aa3.49□□□□□ -1.85
SNF8YPL002C SAS5Q99314 248 aa3.49□□□□□ -1.85
SNF8YPL002C ERD2P18414 219 aa3.48□□□□□ -1.85
SNF8YPL002C MRPS28P21771 286 aa3.48□□□□□ -1.85
SNF8YPL002C MEK1P24719 497 aaPredicted RBP3.48□□□□□ -1.85
SNF8YPL002C YBL010CP32788 280 aa3.48□□□□□ -1.85
SNF8YPL002C SEC66P33754 206 aa3.48□□□□□ -1.85
SNF8YPL002C COS9P36034 407 aa3.48□□□□□ -1.85
SNF8YPL002C ROT2P38138 954 aa3.48□□□□□ -1.85
SNF8YPL002C SSH1P38353 490 aaKnown RBP3.48□□□□□ -1.85
SNF8YPL002C BIG1P38813 335 aa3.48□□□□□ -1.85
SNF8YPL002C YER084WP40057 128 aa3.48□□□□□ -1.85
SNF8YPL002C PFK26P40433 827 aaKnown RBP3.48□□□□□ -1.85
SNF8YPL002C POP1P41812 875 aa3.48□□□□□ -1.85
SNF8YPL002C AGP3P43548 558 aa3.48□□□□□ -1.85
SNF8YPL002C YHC3P47040 408 aa3.48□□□□□ -1.85
SNF8YPL002C CCC1P47818 322 aa3.48□□□□□ -1.85
SNF8YPL002C UBC13P52490 153 aa3.48□□□□□ -1.85
SNF8YPL002C PKP2P53170 491 aa3.48□□□□□ -1.85
SNF8YPL002C SED1Q01589 338 aa3.48□□□□□ -1.85
SNF8YPL002C TVP15Q03860 143 aa3.48□□□□□ -1.85
SNF8YPL002C RIM9Q04734 239 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms