RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W GRX8Q05926 109 aa2.7□□□□□ -1.98
MSH2YOL090W ORM2Q06144 216 aa2.7□□□□□ -1.98
MSH2YOL090W AGC1Q12482 902 aa2.7□□□□□ -1.98
MSH2YOL090W ZWF1P11412 505 aaKnown RBP2.69□□□□□ -1.98
MSH2YOL090W DBF2P22204 572 aa2.69□□□□□ -1.98
MSH2YOL090W CAT2P32796 670 aaKnown RBP2.69□□□□□ -1.98
MSH2YOL090W YNK1P36010 153 aaKnown RBP2.69□□□□□ -1.98
MSH2YOL090W EDC3P39998 551 aaKnown RBP2.69□□□□□ -1.98
MSH2YOL090W YER076CP40049 302 aa2.69□□□□□ -1.98
MSH2YOL090W YNL320WP42840 284 aa2.69□□□□□ -1.98
MSH2YOL090W SBH2P52871 88 aa2.69□□□□□ -1.98
MSH2YOL090W POP6P53218 158 aa2.69□□□□□ -1.98
MSH2YOL090W PDR17P53844 350 aa2.69□□□□□ -1.98
MSH2YOL090W IBD2P53892 351 aa2.69□□□□□ -1.98
MSH2YOL090W YMR181CQ03231 154 aa2.69□□□□□ -1.98
MSH2YOL090W SEI1Q06058 285 aa2.69□□□□□ -1.98
MSH2YOL090W MIM1Q08176 113 aa2.69□□□□□ -1.98
MSH2YOL090W RRS1Q08746 203 aaKnown RBP2.69□□□□□ -1.98
MSH2YOL090W NSL1Q12143 216 aa2.69□□□□□ -1.98
MSH2YOL090W MRPL28P36527 147 aa2.69□□□□□ -1.98
MSH2YOL090W MCM22P47167 239 aa2.69□□□□□ -1.98
MSH2YOL090W BRR6P53062 197 aa2.69□□□□□ -1.98
MSH2YOL090W YGR042WP53227 271 aa2.69□□□□□ -1.98
MSH2YOL090W ATP23P53722 227 aa2.69□□□□□ -1.98
MSH2YOL090W YNL234WP53857 426 aa2.69□□□□□ -1.98
MSH2YOL090W YMR279CQ03263 540 aa2.69□□□□□ -1.98
MSH2YOL090W TDA1Q03533 586 aa2.69□□□□□ -1.98
MSH2YOL090W MRX9Q07349 420 aaKnown RBP2.69□□□□□ -1.98
MSH2YOL090W SNX3Q08826 162 aaKnown RBP2.69□□□□□ -1.98
MSH2YOL090W YLR053CQ12026 108 aa2.69□□□□□ -1.98
MSH2YOL090W RFM1Q12192 310 aa2.69□□□□□ -1.98
MSH2YOL090W RRP42Q12277 265 aaPredicted RBP2.69□□□□□ -1.98
MSH2YOL090W SNU23Q12368 194 aaPredicted RBP2.69□□□□□ -1.98
MSH2YOL090W MRX4Q12467 430 aa2.69□□□□□ -1.98
MSH2YOL090W RPL23AP0CX41 137 aaKnown RBP2.68□□□□□ -1.98
MSH2YOL090W RPL23BP0CX42 137 aaKnown RBP2.68□□□□□ -1.98
MSH2YOL090W ERD1P16151 362 aa2.68□□□□□ -1.98
MSH2YOL090W ATG15P25641 520 aa2.68□□□□□ -1.98
MSH2YOL090W GPX1P36014 167 aa2.68□□□□□ -1.98
MSH2YOL090W MRPL3P36516 390 aa2.68□□□□□ -1.98
MSH2YOL090W MTC6P38849 526 aa2.68□□□□□ -1.98
MSH2YOL090W CPR7P47103 393 aa2.68□□□□□ -1.98
MSH2YOL090W GTR2P53290 341 aa2.68□□□□□ -1.98
MSH2YOL090W PET191Q02772 108 aa2.68□□□□□ -1.98
MSH2YOL090W YOR283WQ12040 230 aaKnown RBP2.68□□□□□ -1.98
MSH2YOL090W YAL064W-BO13512 126 aa2.68□□□□□ -1.98
MSH2YOL090W RPL42AP0CX27 106 aaKnown RBP2.68□□□□□ -1.98
MSH2YOL090W RPL42BP0CX28 106 aaKnown RBP2.68□□□□□ -1.98
MSH2YOL090W RPL16AP26784 199 aaKnown RBP2.68□□□□□ -1.98
MSH2YOL090W INO2P26798 304 aa2.68□□□□□ -1.98
MSH2YOL090W CAF4P36130 643 aa2.68□□□□□ -1.98
MSH2YOL090W MDM31P38880 579 aa2.68□□□□□ -1.98
MSH2YOL090W CYC2P38909 366 aa2.68□□□□□ -1.98
MSH2YOL090W VPS25P47142 202 aa2.68□□□□□ -1.98
MSH2YOL090W CSR2Q12734 1121 aa2.68□□□□□ -1.98
MSH2YOL090W PMD1P32634 1753 aa2.68□□□□□ -1.98
MSH2YOL090W PET54P10834 293 aa2.67□□□□□ -1.98
MSH2YOL090W WSC4P38739 605 aa2.67□□□□□ -1.98
MSH2YOL090W CHL4P38907 458 aa2.67□□□□□ -1.98
MSH2YOL090W PEX22P39718 180 aa2.67□□□□□ -1.98
MSH2YOL090W UBP5P39944 805 aa2.67□□□□□ -1.98
MSH2YOL090W YFH7P43591 353 aa2.67□□□□□ -1.98
MSH2YOL090W LCB3P47013 409 aa2.67□□□□□ -1.98
MSH2YOL090W VMA10P48836 114 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W PIR3Q03180 325 aa2.67□□□□□ -1.98
MSH2YOL090W SDC1Q03323 175 aa2.67□□□□□ -1.98
MSH2YOL090W GMC1Q04399 608 aa2.67□□□□□ -1.98
MSH2YOL090W FAR10Q06001 478 aa2.67□□□□□ -1.98
MSH2YOL090W YPR127WQ06494 345 aa2.67□□□□□ -1.98
MSH2YOL090W FCY22Q12119 530 aa2.67□□□□□ -1.98
MSH2YOL090W BI3Q9ZZW7 517 aa2.67□□□□□ -1.98
MSH2YOL090W PHO2P07269 559 aa2.67□□□□□ -1.98
MSH2YOL090W RNA14P25298 677 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W ARO7P32178 256 aa2.67□□□□□ -1.98
MSH2YOL090W AEP1P32493 518 aa2.67□□□□□ -1.98
MSH2YOL090W ANR2P36090 516 aaPredicted RBP2.67□□□□□ -1.98
MSH2YOL090W ECM33P38248 429 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W MED8P38304 223 aa2.67□□□□□ -1.98
MSH2YOL090W YJR054WP47114 497 aa2.67□□□□□ -1.98
MSH2YOL090W YJR111CP47148 283 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W YGL204CP53089 101 aa2.67□□□□□ -1.98
MSH2YOL090W RCF2P53721 224 aa2.67□□□□□ -1.98
MSH2YOL090W RHO3Q00245 231 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W YHC1Q05900 231 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W GAS2Q06135 555 aa2.67□□□□□ -1.98
MSH2YOL090W MLP1Q02455 1875 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W YHR139C-AO13536 103 aa2.67□□□□□ -1.98
MSH2YOL090W HEM4P06174 275 aa2.67□□□□□ -1.98
MSH2YOL090W MRS1P07266 363 aa2.67□□□□□ -1.98
MSH2YOL090W RPS28BP0C0X0 67 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W YCR025CP25352 136 aa2.67□□□□□ -1.98
MSH2YOL090W FUN26P31381 517 aa2.67□□□□□ -1.98
MSH2YOL090W ATS1P31386 333 aa2.67□□□□□ -1.98
MSH2YOL090W DRE2P36152 348 aa2.67□□□□□ -1.98
MSH2YOL090W HEK2P38199 381 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
MSH2YOL090W MBA1P38300 278 aa2.67□□□□□ -1.98
MSH2YOL090W OST1P41543 476 aaKnown RBP2.67□□□□□ -1.98
MSH2YOL090W COS4P43542 379 aa2.67□□□□□ -1.98
MSH2YOL090W FMP32P43557 207 aa2.67□□□□□ -1.98
MSH2YOL090W FYV6P53913 173 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms