RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W PAU5P43575 122 aa2.78□□□□□ -1.96
PHD1YKL043W LOC1P43586 204 aaPredicted RBP2.78□□□□□ -1.96
PHD1YKL043W DLD2P46681 530 aaKnown RBP2.78□□□□□ -1.96
PHD1YKL043W RPS10BP46784 105 aaKnown RBP2.78□□□□□ -1.96
PHD1YKL043W NNF1P47149 201 aa2.78□□□□□ -1.96
PHD1YKL043W TRM9P49957 279 aa2.78□□□□□ -1.96
PHD1YKL043W MNN10P50108 393 aaKnown RBP2.78□□□□□ -1.96
PHD1YKL043W AVT4P50944 713 aa2.78□□□□□ -1.96
PHD1YKL043W YGL262WP53054 175 aa2.78□□□□□ -1.96
PHD1YKL043W NIF3P53081 288 aa2.78□□□□□ -1.96
PHD1YKL043W VPS73P53142 486 aaKnown RBP2.78□□□□□ -1.96
PHD1YKL043W YIF1P53845 314 aaKnown RBP2.78□□□□□ -1.96
PHD1YKL043W YNL018CP53976 612 aa2.78□□□□□ -1.96
PHD1YKL043W SLG1P54867 378 aa2.78□□□□□ -1.96
PHD1YKL043W RSM23Q01163 450 aa2.78□□□□□ -1.96
PHD1YKL043W OAZ1Q02803 292 aa2.78□□□□□ -1.96
PHD1YKL043W EST3Q03096 181 aa2.78□□□□□ -1.96
PHD1YKL043W TMA23Q03525 211 aa2.78□□□□□ -1.96
PHD1YKL043W YDR415CQ04033 374 aaPredicted RBP2.78□□□□□ -1.96
PHD1YKL043W YML096WQ04489 525 aa2.78□□□□□ -1.96
PHD1YKL043W TMN2Q04562 672 aa2.78□□□□□ -1.96
PHD1YKL043W SSL1Q04673 461 aaPredicted RBP2.78□□□□□ -1.96
PHD1YKL043W HRD3Q05787 833 aa2.78□□□□□ -1.96
PHD1YKL043W YLR456WQ06199 204 aa2.78□□□□□ -1.96
PHD1YKL043W CDD1Q06549 142 aa2.78□□□□□ -1.96
PHD1YKL043W BER1Q06688 274 aaKnown RBP2.78□□□□□ -1.96
PHD1YKL043W ATG10Q07879 167 aa2.78□□□□□ -1.96
PHD1YKL043W LDB18Q07887 179 aa2.78□□□□□ -1.96
PHD1YKL043W HRD1Q08109 551 aa2.78□□□□□ -1.96
PHD1YKL043W IRC10Q08118 586 aa2.78□□□□□ -1.96
PHD1YKL043W RPS10AQ08745 105 aaPredicted RBP2.78□□□□□ -1.96
PHD1YKL043W YOR365CQ08844 703 aa2.78□□□□□ -1.96
PHD1YKL043W YPL257WQ08974 193 aa2.78□□□□□ -1.96
PHD1YKL043W SRL2Q12020 392 aa2.78□□□□□ -1.96
PHD1YKL043W TGL5Q12043 749 aa2.78□□□□□ -1.96
PHD1YKL043W MRH1Q12117 320 aaPredicted RBP2.78□□□□□ -1.96
PHD1YKL043W TPO4Q12256 659 aa2.78□□□□□ -1.96
PHD1YKL043W PET20Q99373 253 aa2.78□□□□□ -1.96
PHD1YKL043W GDH1P07262 454 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W APE1P14904 514 aa2.77□□□□□ -1.97
PHD1YKL043W ANB1P19211 157 aa2.77□□□□□ -1.97
PHD1YKL043W SCL1P21243 252 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W MSN1P22148 382 aa2.77□□□□□ -1.97
PHD1YKL043W MAK32P23060 363 aa2.77□□□□□ -1.97
PHD1YKL043W RPI1P23250 407 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W BOS1P25385 244 aa2.77□□□□□ -1.97
PHD1YKL043W IMG1P25626 169 aa2.77□□□□□ -1.97
PHD1YKL043W ADE1P27616 306 aa2.77□□□□□ -1.97
PHD1YKL043W GAC1P28006 793 aa2.77□□□□□ -1.97
PHD1YKL043W ARO2P28777 376 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W AIM26P32858 118 aa2.77□□□□□ -1.97
PHD1YKL043W NTF2P33331 125 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W SKN1P33336 771 aa2.77□□□□□ -1.97
PHD1YKL043W SOF1P33750 489 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W YKL187CP34231 750 aa2.77□□□□□ -1.97
PHD1YKL043W GCS1P35197 352 aa2.77□□□□□ -1.97
PHD1YKL043W THI80P35202 319 aa2.77□□□□□ -1.97
PHD1YKL043W MRPL11P36521 249 aaPredicted RBP2.77□□□□□ -1.97
PHD1YKL043W MRPL27P36526 146 aaPredicted RBP2.77□□□□□ -1.97
PHD1YKL043W HMT1P38074 348 aa2.77□□□□□ -1.97
PHD1YKL043W THI2P38141 450 aa2.77□□□□□ -1.97
PHD1YKL043W RIB5P38145 238 aa2.77□□□□□ -1.97
PHD1YKL043W YBR292CP38357 123 aa2.77□□□□□ -1.97
PHD1YKL043W CUE1P38428 203 aa2.77□□□□□ -1.97
PHD1YKL043W EFM1P38732 585 aa2.77□□□□□ -1.97
PHD1YKL043W HEM14P40012 539 aa2.77□□□□□ -1.97
PHD1YKL043W FAU1P40099 211 aa2.77□□□□□ -1.97
PHD1YKL043W MET28P40573 187 aa2.77□□□□□ -1.97
PHD1YKL043W MAF1P41910 395 aa2.77□□□□□ -1.97
PHD1YKL043W MEP2P41948 499 aa2.77□□□□□ -1.97
PHD1YKL043W ALK1P43633 760 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W YJR056CP47115 236 aa2.77□□□□□ -1.97
PHD1YKL043W YJR111CP47148 283 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W ASK10P48361 1146 aa2.77□□□□□ -1.97
PHD1YKL043W TIM13P53299 105 aa2.77□□□□□ -1.97
PHD1YKL043W BIO5P53744 561 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W VPS28Q02767 242 aa2.77□□□□□ -1.97
PHD1YKL043W STD1Q02794 444 aa2.77□□□□□ -1.97
PHD1YKL043W RCR2Q03446 210 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W RCE1Q03530 315 aa2.77□□□□□ -1.97
PHD1YKL043W SEC13Q04491 297 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W SEN15Q04675 128 aa2.77□□□□□ -1.97
PHD1YKL043W ARG7Q04728 441 aa2.77□□□□□ -1.97
PHD1YKL043W YPR147CQ06522 304 aaKnown RBP2.77□□□□□ -1.97
PHD1YKL043W TMS1Q12116 473 aa2.77□□□□□ -1.97
PHD1YKL043W TIR4Q12218 487 aaPredicted RBP2.77□□□□□ -1.97
PHD1YKL043W TFB5Q3E7C1 72 aaPredicted RBP2.77□□□□□ -1.97
PHD1YKL043W COX5AP00424 153 aa2.76□□□□□ -1.97
PHD1YKL043W GAL4P04386 881 aa2.76□□□□□ -1.97
PHD1YKL043W DFR1P07807 211 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
PHD1YKL043W SNF5P18480 905 aa2.76□□□□□ -1.97
PHD1YKL043W RPB5P20434 215 aa2.76□□□□□ -1.97
PHD1YKL043W RPB10P22139 70 aa2.76□□□□□ -1.97
PHD1YKL043W AIM17P23180 465 aaKnown RBP2.76□□□□□ -1.97
PHD1YKL043W URK1P27515 501 aa2.76□□□□□ -1.97
PHD1YKL043W AFG1P32317 509 aa2.76□□□□□ -1.97
PHD1YKL043W MRP49P32388 137 aa2.76□□□□□ -1.97
PHD1YKL043W ERG1P32476 496 aaKnown RBP2.76□□□□□ -1.97
PHD1YKL043W UTR5P32630 166 aa2.76□□□□□ -1.97
PHD1YKL043W MGM101P32787 269 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms