RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C USE1P53146 245 aa3.28□□□□□ -1.88
RTN1YDR233C ATG17Q06410 417 aa3.28□□□□□ -1.88
RTN1YDR233C MED4Q12343 284 aa3.28□□□□□ -1.88
RTN1YDR233C SIN3P22579 1536 aa3.28□□□□□ -1.88
RTN1YDR233C YKR104WP0CE69 306 aa3.27□□□□□ -1.89
RTN1YDR233C MAL32P38158 584 aa3.27□□□□□ -1.89
RTN1YDR233C SNZ3P43545 298 aa3.27□□□□□ -1.89
RTN1YDR233C MAL12P53341 584 aa3.27□□□□□ -1.89
RTN1YDR233C MIX17Q03667 156 aa3.27□□□□□ -1.89
RTN1YDR233C GEP5Q12393 293 aa3.27□□□□□ -1.89
RTN1YDR233C SKI3P17883 1432 aaKnown RBP3.27□□□□□ -1.89
RTN1YDR233C YKR032WP36127 104 aa3.26□□□□□ -1.89
RTN1YDR233C CAB4P53332 305 aa3.26□□□□□ -1.89
RTN1YDR233C PET117Q02771 107 aa3.26□□□□□ -1.89
RTN1YDR233C YMR114CQ04471 368 aaKnown RBP3.26□□□□□ -1.89
RTN1YDR233C YPR098CQ06089 161 aa3.26□□□□□ -1.89
RTN1YDR233C YPR147CQ06522 304 aaKnown RBP3.26□□□□□ -1.89
RTN1YDR233C PAM18Q07914 168 aa3.26□□□□□ -1.89
RTN1YDR233C YBL008W-AQ3E821 79 aa3.26□□□□□ -1.89
RTN1YDR233C DPM1P14020 267 aaKnown RBP3.25□□□□□ -1.89
RTN1YDR233C HOC1P47124 396 aa3.25□□□□□ -1.89
RTN1YDR233C SSK2P53599 1579 aa3.25□□□□□ -1.89
RTN1YDR233C SWI1P09547 1314 aa3.24□□□□□ -1.89
RTN1YDR233C RNP1P32385 249 aa3.24□□□□□ -1.89
RTN1YDR233C MED6P38782 295 aa3.24□□□□□ -1.89
RTN1YDR233C THO1P40040 218 aaKnown RBP3.24□□□□□ -1.89
RTN1YDR233C GON7P46984 123 aa3.24□□□□□ -1.89
RTN1YDR233C YJR079WP47126 109 aa3.24□□□□□ -1.89
RTN1YDR233C YJR141WP47172 347 aaPredicted RBP3.24□□□□□ -1.89
RTN1YDR233C MRH4P53166 561 aa3.24□□□□□ -1.89
RTN1YDR233C RSM10Q03201 203 aa3.24□□□□□ -1.89
RTN1YDR233C SPG4Q04438 115 aa3.24□□□□□ -1.89
RTN1YDR233C YCT1Q12235 531 aa3.24□□□□□ -1.89
RTN1YDR233C PST1Q12355 444 aa3.24□□□□□ -1.89
RTN1YDR233C EMP46Q12396 444 aa3.24□□□□□ -1.89
RTN1YDR233C PEP1P32319 1579 aa3.24□□□□□ -1.89
RTN1YDR233C ATG2P53855 1592 aa3.24□□□□□ -1.89
RTN1YDR233C CFT1Q06632 1357 aaKnown RBP3.24□□□□□ -1.89
RTN1YDR233C SGA1P08019 549 aa3.23□□□□□ -1.89
RTN1YDR233C SEC22P22214 214 aa3.23□□□□□ -1.89
RTN1YDR233C DRE2P36152 348 aa3.23□□□□□ -1.89
RTN1YDR233C BFR1P38934 470 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RTN1YDR233C FMC1P40491 155 aa3.23□□□□□ -1.89
RTN1YDR233C YJR146WP47174 117 aa3.23□□□□□ -1.89
RTN1YDR233C SNZ2P53824 298 aa3.23□□□□□ -1.89
RTN1YDR233C IGO1P53897 168 aa3.23□□□□□ -1.89
RTN1YDR233C YLR179CQ06252 201 aaKnown RBP3.23□□□□□ -1.89
RTN1YDR233C RRP40Q08285 240 aaKnown RBP3.23□□□□□ -1.89
RTN1YDR233C RPO26P20435 155 aa3.22□□□□□ -1.89
RTN1YDR233C UTR5P32630 166 aa3.22□□□□□ -1.89
RTN1YDR233C NUP84P52891 726 aa3.22□□□□□ -1.89
RTN1YDR233C MYO5Q04439 1219 aaKnown RBP3.22□□□□□ -1.89
RTN1YDR233C YDR124WQ04608 324 aa3.22□□□□□ -1.89
RTN1YDR233C YPK9Q12697 1472 aa3.22□□□□□ -1.89
RTN1YDR233C RPL26AP05743 127 aaKnown RBP3.21□□□□□ -1.9
RTN1YDR233C SGE1P33335 543 aa3.21□□□□□ -1.9
RTN1YDR233C YKL075CP36083 450 aa3.21□□□□□ -1.9
RTN1YDR233C LDB7P38210 180 aa3.21□□□□□ -1.9
RTN1YDR233C SPT8P38915 602 aa3.21□□□□□ -1.9
RTN1YDR233C RPL26BP53221 127 aaKnown RBP3.21□□□□□ -1.9
RTN1YDR233C RHO3Q00245 231 aaKnown RBP3.21□□□□□ -1.9
RTN1YDR233C GRH1Q04410 372 aaKnown RBP3.21□□□□□ -1.9
RTN1YDR233C SLD7Q08457 257 aa3.21□□□□□ -1.9
RTN1YDR233C SYC1Q08553 188 aaPredicted RBP3.21□□□□□ -1.9
RTN1YDR233C MYO2P19524 1574 aaKnown RBP3.21□□□□□ -1.9
RTN1YDR233C RPS5P26783 225 aaKnown RBP3.2□□□□□ -1.9
RTN1YDR233C FZO1P38297 855 aa3.2□□□□□ -1.9
RTN1YDR233C MRPL50P53724 139 aa3.2□□□□□ -1.9
RTN1YDR233C GOT1Q03554 138 aa3.2□□□□□ -1.9
RTN1YDR233C KRE28Q04431 385 aa3.2□□□□□ -1.9
RTN1YDR233C YOR186WQ08560 144 aa3.2□□□□□ -1.9
RTN1YDR233C RRS1Q08746 203 aaKnown RBP3.2□□□□□ -1.9
RTN1YDR233C MATALPHA1P0CY06 175 aa3.19□□□□□ -1.9
RTN1YDR233C HMLALPHA1P0CY07 175 aa3.19□□□□□ -1.9
RTN1YDR233C YHB1P39676 399 aaKnown RBP3.19□□□□□ -1.9
RTN1YDR233C COG3P40094 801 aa3.19□□□□□ -1.9
RTN1YDR233C YNL046WP53956 172 aa3.19□□□□□ -1.9
RTN1YDR233C YLR283WQ05867 314 aa3.19□□□□□ -1.9
RTN1YDR233C RDS3Q06835 107 aaPredicted RBP3.19□□□□□ -1.9
RTN1YDR233C VPS68Q12016 184 aa3.19□□□□□ -1.9
RTN1YDR233C SNU23Q12368 194 aaPredicted RBP3.19□□□□□ -1.9
RTN1YDR233C YPL229WQ99395 206 aa3.19□□□□□ -1.9
RTN1YDR233C UFD4P33202 1483 aa3.18□□□□□ -1.9
RTN1YDR233C SCC2Q04002 1493 aa3.18□□□□□ -1.9
RTN1YDR233C YCR102CP25608 368 aa3.18□□□□□ -1.9
RTN1YDR233C YCR016WP25617 290 aaKnown RBP3.18□□□□□ -1.9
RTN1YDR233C MSN4P33749 630 aa3.18□□□□□ -1.9
RTN1YDR233C YJL016WP47072 561 aa3.18□□□□□ -1.9
RTN1YDR233C ESP1Q03018 1630 aa3.18□□□□□ -1.9
RTN1YDR233C BPT1P14772 1559 aa3.17□□□□□ -1.9
RTN1YDR233C RPO31P04051 1460 aa3.17□□□□□ -1.9
RTN1YDR233C MRPL39P36533 70 aa3.17□□□□□ -1.9
RTN1YDR233C SSH1P38353 490 aaKnown RBP3.17□□□□□ -1.9
RTN1YDR233C YHR127WP38833 243 aaKnown RBP3.17□□□□□ -1.9
RTN1YDR233C TIF34P40217 347 aaKnown RBP3.17□□□□□ -1.9
RTN1YDR233C PEX12Q04370 399 aa3.17□□□□□ -1.9
RTN1YDR233C SEI1Q06058 285 aa3.17□□□□□ -1.9
RTN1YDR233C POL1P13382 1468 aa3.16□□□□□ -1.9
RTN1YDR233C YER189WP40104 122 aa3.16□□□□□ -1.9
RTN1YDR233C LIA1P47120 325 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms