RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W IMG1P25626 169 aa1.89□□□□□ -2.11
USO1YDL058W ECM33P38248 429 aaKnown RBP1.89□□□□□ -2.11
USO1YDL058W BMT2P38278 337 aa1.89□□□□□ -2.11
USO1YDL058W YHR045WP38775 560 aa1.89□□□□□ -2.11
USO1YDL058W MST28P39552 234 aa1.89□□□□□ -2.11
USO1YDL058W TMN3P40071 706 aa1.89□□□□□ -2.11
USO1YDL058W LCB2P40970 561 aa1.89□□□□□ -2.11
USO1YDL058W SHR5P41912 237 aa1.89□□□□□ -2.11
USO1YDL058W SNO3P43544 222 aa1.89□□□□□ -2.11
USO1YDL058W GAT1P43574 510 aa1.89□□□□□ -2.11
USO1YDL058W LSB3P43603 459 aaKnown RBP1.89□□□□□ -2.11
USO1YDL058W NMA2P53204 395 aa1.89□□□□□ -2.11
USO1YDL058W MRPS35P53292 345 aa1.89□□□□□ -2.11
USO1YDL058W SOK2P53438 785 aaPredicted RBP1.89□□□□□ -2.11
USO1YDL058W LSM7P53905 115 aaKnown RBP1.89□□□□□ -2.11
USO1YDL058W APJ1P53940 528 aa1.89□□□□□ -2.11
USO1YDL058W SAM50P53969 484 aa1.89□□□□□ -2.11
USO1YDL058W IRC15Q02733 499 aa1.89□□□□□ -2.11
USO1YDL058W LDS2Q08218 356 aa1.89□□□□□ -2.11
USO1YDL058W MCA1Q08601 432 aa1.89□□□□□ -2.11
USO1YDL058W YPL264CQ08980 353 aa1.89□□□□□ -2.11
USO1YDL058W YPR202WQ08993 238 aa1.89□□□□□ -2.11
USO1YDL058W GPM2Q12008 311 aa1.89□□□□□ -2.11
USO1YDL058W RPS25AQ3E792 108 aaPredicted RBP1.89□□□□□ -2.11
USO1YDL058W YMR31P19955 123 aa1.88□□□□□ -2.11
USO1YDL058W MRPL44P19956 98 aa1.88□□□□□ -2.11
USO1YDL058W LEU5P38702 357 aa1.88□□□□□ -2.11
USO1YDL058W FMP52P40008 231 aa1.88□□□□□ -2.11
USO1YDL058W HEM14P40012 539 aa1.88□□□□□ -2.11
USO1YDL058W YJR012CP47087 207 aa1.88□□□□□ -2.11
USO1YDL058W SUR7P54003 302 aa1.88□□□□□ -2.11
USO1YDL058W AAT1Q01802 451 aa1.88□□□□□ -2.11
USO1YDL058W TY1A-DR2Q03964 440 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W HRI1Q05905 244 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W YLR407WQ06070 228 aa1.88□□□□□ -2.11
USO1YDL058W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
USO1YDL058W RTK1Q12100 620 aaPredicted RBP1.88□□□□□ -2.11
USO1YDL058W YLR049CQ12110 428 aa1.88□□□□□ -2.11
USO1YDL058W YOP1Q12402 180 aa1.88□□□□□ -2.11
USO1YDL058W PEX11Q12462 236 aa1.88□□□□□ -2.11
USO1YDL058W PDR18P53756 1333 aa1.88□□□□□ -2.11
USO1YDL058W PDR10P51533 1564 aa1.88□□□□□ -2.11
USO1YDL058W PUT1P09368 476 aa1.88□□□□□ -2.11
USO1YDL058W ATP10P18496 279 aa1.88□□□□□ -2.11
USO1YDL058W RFA3P26755 122 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W YPS1P32329 569 aa1.88□□□□□ -2.11
USO1YDL058W RPD3P32561 433 aa1.88□□□□□ -2.11
USO1YDL058W ARN2P38724 620 aa1.88□□□□□ -2.11
USO1YDL058W YHR130CP38834 111 aa1.88□□□□□ -2.11
USO1YDL058W RFC2P40348 353 aa1.88□□□□□ -2.11
USO1YDL058W SAS2P40963 338 aa1.88□□□□□ -2.11
USO1YDL058W FKH2P41813 862 aa1.88□□□□□ -2.11
USO1YDL058W TRM112P53738 135 aaPredicted RBP1.88□□□□□ -2.11
USO1YDL058W YNR062CP53748 327 aa1.88□□□□□ -2.11
USO1YDL058W YNL184CP53876 108 aa1.88□□□□□ -2.11
USO1YDL058W YNL033WP53964 284 aa1.88□□□□□ -2.11
USO1YDL058W YNL019CP53975 284 aa1.88□□□□□ -2.11
USO1YDL058W SNT309Q06091 175 aaPredicted RBP1.88□□□□□ -2.11
USO1YDL058W YPR147CQ06522 304 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W USB1Q12208 290 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W PCL9Q12477 304 aa1.88□□□□□ -2.11
USO1YDL058W HRP1Q99383 534 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W YLR358CO13565 187 aa1.88□□□□□ -2.11
USO1YDL058W TPK3P05986 398 aa1.88□□□□□ -2.11
USO1YDL058W PET9P18239 318 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W APE2P32454 952 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W PPZ2P33329 710 aa1.88□□□□□ -2.11
USO1YDL058W LHP1P33399 275 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W MRPL37P36532 105 aa1.88□□□□□ -2.11
USO1YDL058W HSP10P38910 106 aa1.88□□□□□ -2.11
USO1YDL058W YEL020CP39994 560 aa1.88□□□□□ -2.11
USO1YDL058W SLS1P42900 643 aa1.88□□□□□ -2.11
USO1YDL058W ZAP1P47043 880 aa1.88□□□□□ -2.11
USO1YDL058W SOL1P50278 321 aa1.88□□□□□ -2.11
USO1YDL058W MTQ1P53944 314 aa1.88□□□□□ -2.11
USO1YDL058W RSM23Q01163 450 aa1.88□□□□□ -2.11
USO1YDL058W RPL21AQ02753 160 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W ABZ2Q03266 374 aa1.88□□□□□ -2.11
USO1YDL058W THI74Q04083 370 aa1.88□□□□□ -2.11
USO1YDL058W FMP45Q07651 309 aa1.88□□□□□ -2.11
USO1YDL058W AIM39Q08223 395 aa1.88□□□□□ -2.11
USO1YDL058W HUT1Q12520 339 aa1.88□□□□□ -2.11
USO1YDL058W RPL21BQ12672 160 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W COX3P00420 269 aa1.88□□□□□ -2.11
USO1YDL058W GPM1P00950 247 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W SEC59P20048 519 aa1.88□□□□□ -2.11
USO1YDL058W SAG1P20840 650 aa1.88□□□□□ -2.11
USO1YDL058W SLM5P25345 492 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W RIM1P32445 135 aaKnown RBP1.88□□□□□ -2.11
USO1YDL058W ICE2P40499 491 aa1.88□□□□□ -2.11
USO1YDL058W MTR3P48240 250 aaPredicted RBP1.88□□□□□ -2.11
USO1YDL058W CWC23P52868 283 aaPredicted RBP1.88□□□□□ -2.11
USO1YDL058W YNL095CP53932 642 aa1.88□□□□□ -2.11
USO1YDL058W TIM10P87108 93 aa1.88□□□□□ -2.11
USO1YDL058W STD1Q02794 444 aa1.88□□□□□ -2.11
USO1YDL058W PLB2Q03674 706 aa1.88□□□□□ -2.11
USO1YDL058W YDR391CQ04170 232 aa1.88□□□□□ -2.11
USO1YDL058W GLO2Q05584 274 aa1.88□□□□□ -2.11
USO1YDL058W PRR2Q12310 699 aa1.88□□□□□ -2.11
USO1YDL058W YLR462WO13556 202 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 124.7 ms