RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C RPD3P32561 433 aa6.12□□□□□ -1.43
TDP1YBR223C NIT2P47016 307 aa6.12□□□□□ -1.43
TDP1YBR223C LCL3P53153 274 aa6.12□□□□□ -1.43
TDP1YBR223C YGR126WP53274 230 aa6.12□□□□□ -1.43
TDP1YBR223C ALG9P53868 555 aaKnown RBP6.12□□□□□ -1.43
TDP1YBR223C RNH201P53942 307 aa6.12□□□□□ -1.43
TDP1YBR223C CAC2Q04199 468 aa6.12□□□□□ -1.43
TDP1YBR223C RDL2Q08742 149 aaKnown RBP6.12□□□□□ -1.43
TDP1YBR223C PAR32Q12515 295 aaKnown RBP6.12□□□□□ -1.43
TDP1YBR223C YLR146W-AQ2V2P1 62 aa6.12□□□□□ -1.43
TDP1YBR223C YAL064W-BO13512 126 aa6.11□□□□□ -1.43
TDP1YBR223C SCEIP03882 235 aa6.11□□□□□ -1.43
TDP1YBR223C RPS31P05759 152 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C UBI4P0CG63 381 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C RPL40AP0CH08 128 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C RPL40BP0CH09 128 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C NAM2P11325 894 aa6.11□□□□□ -1.43
TDP1YBR223C IFM1P25038 676 aa6.11□□□□□ -1.43
TDP1YBR223C RFA3P26755 122 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C TRR1P29509 319 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C MKK2P32491 506 aa6.11□□□□□ -1.43
TDP1YBR223C VAM7P32912 316 aa6.11□□□□□ -1.43
TDP1YBR223C SOL3P38858 249 aa6.11□□□□□ -1.43
TDP1YBR223C YML053CQ04978 212 aa6.11□□□□□ -1.43
TDP1YBR223C BER1Q06688 274 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C RRT7Q07829 113 aa6.11□□□□□ -1.43
TDP1YBR223C MCH4Q08268 501 aa6.11□□□□□ -1.43
TDP1YBR223C SCP1Q08873 200 aa6.11□□□□□ -1.43
TDP1YBR223C TY1A-DR3Q12441 440 aa6.11□□□□□ -1.43
TDP1YBR223C VMA9Q3E7B6 73 aa6.11□□□□□ -1.43
TDP1YBR223C PCC1Q3E833 88 aa6.11□□□□□ -1.43
TDP1YBR223C CYR1P08678 2026 aaKnown RBP6.11□□□□□ -1.43
TDP1YBR223C SCO1P23833 295 aa6.1□□□□□ -1.43
TDP1YBR223C MCM10P32354 571 aa6.1□□□□□ -1.43
TDP1YBR223C COQ2P32378 372 aa6.1□□□□□ -1.43
TDP1YBR223C ECM31P38122 312 aa6.1□□□□□ -1.43
TDP1YBR223C OM14P38325 134 aa6.1□□□□□ -1.43
TDP1YBR223C YHR210CP38893 341 aa6.1□□□□□ -1.43
TDP1YBR223C HSV2P50079 448 aaPredicted RBP6.1□□□□□ -1.43
TDP1YBR223C YDR102CQ03864 110 aa6.1□□□□□ -1.43
TDP1YBR223C RTT103Q05543 409 aa6.1□□□□□ -1.43
TDP1YBR223C YDL129WQ07555 291 aa6.1□□□□□ -1.43
TDP1YBR223C VAM3Q12241 283 aa6.1□□□□□ -1.43
TDP1YBR223C SPO7P18410 259 aa6.1□□□□□ -1.43
TDP1YBR223C RFA1P22336 621 aaKnown RBP6.1□□□□□ -1.43
TDP1YBR223C AFG1P32317 509 aa6.1□□□□□ -1.43
TDP1YBR223C APD1P38281 316 aa6.1□□□□□ -1.43
TDP1YBR223C EMC5P40540 141 aa6.1□□□□□ -1.43
TDP1YBR223C UFD1P53044 361 aa6.1□□□□□ -1.43
TDP1YBR223C PKP2P53170 491 aa6.1□□□□□ -1.43
TDP1YBR223C BSC5P53755 489 aa6.1□□□□□ -1.43
TDP1YBR223C BDS1Q08347 646 aa6.1□□□□□ -1.43
TDP1YBR223C SWM1Q12379 170 aa6.1□□□□□ -1.43
TDP1YBR223C TDH1P00360 332 aaKnown RBP6.09□□□□□ -1.43
TDP1YBR223C CDC26P14724 124 aa6.09□□□□□ -1.43
TDP1YBR223C MRPL33P20084 86 aa6.09□□□□□ -1.43
TDP1YBR223C OLE1P21147 510 aaKnown RBP6.09□□□□□ -1.43
TDP1YBR223C COS9P36034 407 aa6.09□□□□□ -1.43
TDP1YBR223C YKR073CP36153 106 aa6.09□□□□□ -1.43
TDP1YBR223C LNP1P38878 278 aa6.09□□□□□ -1.43
TDP1YBR223C YER010CP40011 234 aa6.09□□□□□ -1.43
TDP1YBR223C YJL016WP47072 561 aa6.09□□□□□ -1.43
TDP1YBR223C FMP41P53889 259 aaKnown RBP6.09□□□□□ -1.43
TDP1YBR223C YMR265CQ03508 461 aaKnown RBP6.09□□□□□ -1.43
TDP1YBR223C TGS1Q12052 315 aa6.09□□□□□ -1.43
TDP1YBR223C FRE7Q12333 620 aa6.09□□□□□ -1.43
TDP1YBR223C HBN1Q96VH4 193 aa6.09□□□□□ -1.43
TDP1YBR223C ISN1Q99312 450 aa6.09□□□□□ -1.43
TDP1YBR223C IPP1P00817 287 aaKnown RBP6.08□□□□□ -1.44
TDP1YBR223C ARO3P14843 370 aaKnown RBP6.08□□□□□ -1.44
TDP1YBR223C YKL162CP36052 402 aa6.08□□□□□ -1.44
TDP1YBR223C SHO1P40073 367 aa6.08□□□□□ -1.44
TDP1YBR223C AGX1P43567 385 aa6.08□□□□□ -1.44
TDP1YBR223C YJR011CP47086 261 aaPredicted RBP6.08□□□□□ -1.44
TDP1YBR223C SKP1P52286 194 aa6.08□□□□□ -1.44
TDP1YBR223C HOL1P53389 586 aa6.08□□□□□ -1.44
TDP1YBR223C YPL039WQ03080 316 aa6.08□□□□□ -1.44
TDP1YBR223C EST3Q03096 181 aa6.08□□□□□ -1.44
TDP1YBR223C NRG1Q03125 231 aa6.08□□□□□ -1.44
TDP1YBR223C DIG2Q03373 323 aaKnown RBP6.08□□□□□ -1.44
TDP1YBR223C ZEO1Q08245 113 aa6.08□□□□□ -1.44
TDP1YBR223C NIP7Q08962 181 aaKnown RBP6.08□□□□□ -1.44
TDP1YBR223C SNU23Q12368 194 aaPredicted RBP6.08□□□□□ -1.44
TDP1YBR223C YHR214C-EQ8TGK0 99 aa6.08□□□□□ -1.44
TDP1YBR223C UBA3Q99344 299 aa6.08□□□□□ -1.44
TDP1YBR223C BEM2P39960 2167 aaKnown RBP6.08□□□□□ -1.44
TDP1YBR223C TY1A-DR4O74302 440 aa6.07□□□□□ -1.44
TDP1YBR223C MES1P00958 751 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C CDC36P06100 191 aaPredicted RBP6.07□□□□□ -1.44
TDP1YBR223C TY1A-AP0CX57 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-PR1P0CX58 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-ORP0CX59 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-PR2P0CX60 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-DR5P0CX65 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-ER2P0CX66 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-GR3P0CX67 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-LR1P0CX68 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-MR2P0CX69 440 aa6.07□□□□□ -1.44
TDP1YBR223C MSK1P32048 576 aa6.07□□□□□ -1.44
TDP1YBR223C IKI1P38874 309 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms