RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W ALG9P53868 555 aaKnown RBP5.25□□□□□ -1.57
RPN7YPR108W ARG5,6Q01217 863 aa5.25□□□□□ -1.57
RPN7YPR108W KAP120Q02932 1032 aa5.25□□□□□ -1.57
RPN7YPR108W COX20Q04935 205 aa5.25□□□□□ -1.57
RPN7YPR108W PAL1Q05518 499 aaKnown RBP5.25□□□□□ -1.57
RPN7YPR108W KEI1Q06346 221 aa5.25□□□□□ -1.57
RPN7YPR108W NOC4Q06512 552 aaPredicted RBP5.25□□□□□ -1.57
RPN7YPR108W YPR147CQ06522 304 aaKnown RBP5.25□□□□□ -1.57
RPN7YPR108W YOL029CQ08187 201 aa5.25□□□□□ -1.57
RPN7YPR108W ZEO1Q08245 113 aa5.25□□□□□ -1.57
RPN7YPR108W FCF2Q12035 217 aaPredicted RBP5.25□□□□□ -1.57
RPN7YPR108W BBP1Q12365 385 aa5.25□□□□□ -1.57
RPN7YPR108W NPC2Q12408 173 aa5.25□□□□□ -1.57
RPN7YPR108W CCH1P50077 2039 aa5.24□□□□□ -1.57
RPN7YPR108W YAL064W-BO13512 126 aa5.24□□□□□ -1.57
RPN7YPR108W YBR085C-AO43137 85 aa5.24□□□□□ -1.57
RPN7YPR108W YCL002CP25565 263 aa5.24□□□□□ -1.57
RPN7YPR108W YCR101CP25607 182 aa5.24□□□□□ -1.57
RPN7YPR108W FAA1P30624 700 aaKnown RBP5.24□□□□□ -1.57
RPN7YPR108W FRM2P37261 193 aa5.24□□□□□ -1.57
RPN7YPR108W CAT5P41735 233 aa5.24□□□□□ -1.57
RPN7YPR108W ERJ5P43613 295 aaPredicted RBP5.24□□□□□ -1.57
RPN7YPR108W PBP1P53297 722 aaKnown RBP5.24□□□□□ -1.57
RPN7YPR108W SOK2P53438 785 aaPredicted RBP5.24□□□□□ -1.57
RPN7YPR108W AAH1P53909 347 aa5.24□□□□□ -1.57
RPN7YPR108W PLB2Q03674 706 aa5.24□□□□□ -1.57
RPN7YPR108W YDR248CQ03786 193 aa5.24□□□□□ -1.57
RPN7YPR108W TY1A-DR2Q03964 440 aaKnown RBP5.24□□□□□ -1.57
RPN7YPR108W DAL4Q04895 635 aa5.24□□□□□ -1.57
RPN7YPR108W YLR224WQ05947 369 aa5.24□□□□□ -1.57
RPN7YPR108W RDL2Q08742 149 aaKnown RBP5.24□□□□□ -1.57
RPN7YPR108W YOR385WQ08909 290 aa5.24□□□□□ -1.57
RPN7YPR108W AKR2Q12013 749 aa5.24□□□□□ -1.57
RPN7YPR108W LYS21Q12122 440 aaKnown RBP5.24□□□□□ -1.57
RPN7YPR108W VAM3Q12241 283 aa5.24□□□□□ -1.57
RPN7YPR108W PRP46Q12417 451 aaPredicted RBP5.24□□□□□ -1.57
RPN7YPR108W TOM1Q03280 3268 aa5.24□□□□□ -1.57
RPN7YPR108W COX1P00401 534 aa5.23□□□□□ -1.57
RPN7YPR108W ADK1P07170 222 aaKnown RBP5.23□□□□□ -1.57
RPN7YPR108W YPC1P38298 316 aa5.23□□□□□ -1.57
RPN7YPR108W SHO1P40073 367 aa5.23□□□□□ -1.57
RPN7YPR108W PUG1P40100 303 aa5.23□□□□□ -1.57
RPN7YPR108W TIR3P40552 269 aa5.23□□□□□ -1.57
RPN7YPR108W YPS6P40583 537 aa5.23□□□□□ -1.57
RPN7YPR108W CIN2P46670 268 aa5.23□□□□□ -1.57
RPN7YPR108W YJL016WP47072 561 aa5.23□□□□□ -1.57
RPN7YPR108W GPI14P47088 403 aaKnown RBP5.23□□□□□ -1.57
RPN7YPR108W UBC12P52491 188 aa5.23□□□□□ -1.57
RPN7YPR108W MTL1P53214 551 aa5.23□□□□□ -1.57
RPN7YPR108W YNR048WP53740 393 aa5.23□□□□□ -1.57
RPN7YPR108W MEH1Q02205 184 aa5.23□□□□□ -1.57
RPN7YPR108W PET191Q02772 108 aa5.23□□□□□ -1.57
RPN7YPR108W YDR387CQ04162 555 aa5.23□□□□□ -1.57
RPN7YPR108W VBA1Q04301 562 aa5.23□□□□□ -1.57
RPN7YPR108W YMR252CQ04814 134 aa5.23□□□□□ -1.57
RPN7YPR108W MRPL35Q06678 367 aa5.23□□□□□ -1.57
RPN7YPR108W CDA2Q06703 312 aa5.23□□□□□ -1.57
RPN7YPR108W MRX9Q07349 420 aaKnown RBP5.23□□□□□ -1.57
RPN7YPR108W PRP11Q07350 266 aaPredicted RBP5.23□□□□□ -1.57
RPN7YPR108W ORT1Q12375 292 aa5.23□□□□□ -1.57
RPN7YPR108W ODC2Q99297 307 aa5.23□□□□□ -1.57
RPN7YPR108W CDC36P06100 191 aaPredicted RBP5.22□□□□□ -1.57
RPN7YPR108W YFR010W-AP0C5N0 62 aa5.22□□□□□ -1.57
RPN7YPR108W MSN1P22148 382 aa5.22□□□□□ -1.57
RPN7YPR108W CPR4P25334 318 aa5.22□□□□□ -1.57
RPN7YPR108W YCR102CP25608 368 aa5.22□□□□□ -1.57
RPN7YPR108W AFG1P32317 509 aa5.22□□□□□ -1.57
RPN7YPR108W DBF20P32328 564 aa5.22□□□□□ -1.57
RPN7YPR108W PAN3P36102 679 aaPredicted RBP5.22□□□□□ -1.57
RPN7YPR108W UMP1P38293 148 aa5.22□□□□□ -1.57
RPN7YPR108W RTC3P38804 111 aaPredicted RBP5.22□□□□□ -1.57
RPN7YPR108W YHR122WP38829 231 aa5.22□□□□□ -1.57
RPN7YPR108W YER010CP40011 234 aa5.22□□□□□ -1.57
RPN7YPR108W REE1P40893 198 aa5.22□□□□□ -1.57
RPN7YPR108W JAC1P53193 184 aa5.22□□□□□ -1.57
RPN7YPR108W TIM44Q01852 431 aa5.22□□□□□ -1.57
RPN7YPR108W HRT1Q08273 121 aa5.22□□□□□ -1.57
RPN7YPR108W SCP1Q08873 200 aa5.22□□□□□ -1.57
RPN7YPR108W AEP3Q12089 606 aa5.22□□□□□ -1.57
RPN7YPR108W YOR343CQ12484 108 aa5.22□□□□□ -1.57
RPN7YPR108W YLR358CO13565 187 aa5.21□□□□□ -1.58
RPN7YPR108W TDH3P00359 332 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
RPN7YPR108W REP2P03872 296 aa5.21□□□□□ -1.58
RPN7YPR108W GRX2P17695 143 aaKnown RBP5.21□□□□□ -1.58
RPN7YPR108W DAL82P21705 255 aa5.21□□□□□ -1.58
RPN7YPR108W PPA2P28239 310 aa5.21□□□□□ -1.58
RPN7YPR108W ERG3P32353 365 aa5.21□□□□□ -1.58
RPN7YPR108W MCM10P32354 571 aa5.21□□□□□ -1.58
RPN7YPR108W ERG24P32462 438 aaKnown RBP5.21□□□□□ -1.58
RPN7YPR108W SRB6P32570 121 aa5.21□□□□□ -1.58
RPN7YPR108W WSC4P38739 605 aa5.21□□□□□ -1.58
RPN7YPR108W RPP1P38786 293 aa5.21□□□□□ -1.58
RPN7YPR108W SIT1P39980 628 aa5.21□□□□□ -1.58
RPN7YPR108W CFD1P40558 293 aa5.21□□□□□ -1.58
RPN7YPR108W YJR120WP47157 116 aa5.21□□□□□ -1.58
RPN7YPR108W BXI1P48558 297 aa5.21□□□□□ -1.58
RPN7YPR108W AVT4P50944 713 aa5.21□□□□□ -1.58
RPN7YPR108W UFD1P53044 361 aa5.21□□□□□ -1.58
RPN7YPR108W BRR6P53062 197 aa5.21□□□□□ -1.58
RPN7YPR108W YNR040WP53736 256 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 192 ms