RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C ATG26Q06321 1198 aa1.62□□□□□ -2.15
ATG11YPR049C SRL1Q08673 210 aa1.62□□□□□ -2.15
ATG11YPR049C DPM1P14020 267 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C BUB2P26448 306 aaPredicted RBP1.62□□□□□ -2.15
ATG11YPR049C ZIP1P31111 875 aa1.62□□□□□ -2.15
ATG11YPR049C GPX1P36014 167 aa1.62□□□□□ -2.15
ATG11YPR049C VPS21P36017 210 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C LAG1P38703 411 aa1.62□□□□□ -2.15
ATG11YPR049C MNN9P39107 395 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C CIN4P39110 191 aa1.62□□□□□ -2.15
ATG11YPR049C YDL186WP48568 277 aa1.62□□□□□ -2.15
ATG11YPR049C YPT32P51996 222 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C WSC2P53832 503 aa1.62□□□□□ -2.15
ATG11YPR049C SNT309Q06091 175 aaPredicted RBP1.62□□□□□ -2.15
ATG11YPR049C ARR3Q06598 404 aa1.62□□□□□ -2.15
ATG11YPR049C YOL131WQ08270 108 aa1.62□□□□□ -2.15
ATG11YPR049C INP53Q12271 1107 aa1.62□□□□□ -2.15
ATG11YPR049C MRS3P10566 314 aa1.62□□□□□ -2.15
ATG11YPR049C CUP2P15315 225 aa1.62□□□□□ -2.15
ATG11YPR049C PWP1P21304 576 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C PEP8P40335 379 aa1.62□□□□□ -2.15
ATG11YPR049C PFS2P42841 465 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C AVT4P50944 713 aa1.62□□□□□ -2.15
ATG11YPR049C MIX17Q03667 156 aa1.62□□□□□ -2.15
ATG11YPR049C NAT4Q04751 285 aa1.62□□□□□ -2.15
ATG11YPR049C VPS17P32913 551 aa1.61□□□□□ -2.15
ATG11YPR049C ARC19P33204 171 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C PAD1P33751 242 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
ATG11YPR049C MRPL10P36520 322 aa1.61□□□□□ -2.15
ATG11YPR049C SPO73P40031 143 aa1.61□□□□□ -2.15
ATG11YPR049C YNL194CP40169 301 aa1.61□□□□□ -2.15
ATG11YPR049C YMR209CQ03648 457 aa1.61□□□□□ -2.15
ATG11YPR049C HPT1Q04178 221 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C RRB1Q04225 511 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C SPG4Q04438 115 aa1.61□□□□□ -2.15
ATG11YPR049C SSQ1Q05931 657 aaPredicted RBP1.61□□□□□ -2.15
ATG11YPR049C HTZ1Q12692 134 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C YCP4P25349 247 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C TIM12P32830 109 aa1.61□□□□□ -2.15
ATG11YPR049C POP2P39008 433 aa1.61□□□□□ -2.15
ATG11YPR049C SHO1P40073 367 aa1.61□□□□□ -2.15
ATG11YPR049C CAK1P43568 368 aaPredicted RBP1.61□□□□□ -2.15
ATG11YPR049C MSS11Q03825 758 aa1.61□□□□□ -2.15
ATG11YPR049C YHP1Q04116 353 aa1.61□□□□□ -2.15
ATG11YPR049C GMC2Q06201 188 aa1.61□□□□□ -2.15
ATG11YPR049C ARR2Q06597 130 aa1.61□□□□□ -2.15
ATG11YPR049C YPL199CQ08954 240 aa1.61□□□□□ -2.15
ATG11YPR049C YMR105W-AQ8TGS8 64 aa1.61□□□□□ -2.15
ATG11YPR049C SAL1D6W196 494 aa1.61□□□□□ -2.15
ATG11YPR049C BGL2P15703 313 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C ECM25P32525 599 aa1.61□□□□□ -2.15
ATG11YPR049C YEL043WP32618 956 aa1.61□□□□□ -2.15
ATG11YPR049C CBT1P36038 271 aaPredicted RBP1.61□□□□□ -2.15
ATG11YPR049C AIM20P40451 204 aa1.61□□□□□ -2.15
ATG11YPR049C LIA1P47120 325 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C TVP15Q03860 143 aa1.61□□□□□ -2.15
ATG11YPR049C UTP15Q04305 513 aaKnown RBP1.61□□□□□ -2.15
ATG11YPR049C AIM6Q07716 390 aa1.61□□□□□ -2.15
ATG11YPR049C RRT8Q08219 342 aa1.61□□□□□ -2.15
ATG11YPR049C OPI3P05375 206 aa1.6□□□□□ -2.15
ATG11YPR049C HSP30P25619 332 aa1.6□□□□□ -2.15
ATG11YPR049C PHD1P36093 366 aa1.6□□□□□ -2.15
ATG11YPR049C CIN2P46670 268 aa1.6□□□□□ -2.15
ATG11YPR049C SOL1P50278 321 aa1.6□□□□□ -2.15
ATG11YPR049C YIF1P53845 314 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C SNZ1Q03148 297 aa1.6□□□□□ -2.15
ATG11YPR049C AIM36Q03798 255 aa1.6□□□□□ -2.15
ATG11YPR049C YEH2Q07950 538 aa1.6□□□□□ -2.15
ATG11YPR049C RFU1Q08003 200 aa1.6□□□□□ -2.15
ATG11YPR049C YOL163WP0CF20 169 aa1.6□□□□□ -2.15
ATG11YPR049C YPK2P18961 677 aa1.6□□□□□ -2.15
ATG11YPR049C RVS161P25343 265 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C AFG1P32317 509 aa1.6□□□□□ -2.15
ATG11YPR049C ZUO1P32527 433 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C PDC2P32896 925 aa1.6□□□□□ -2.15
ATG11YPR049C YBR032WP38223 100 aa1.6□□□□□ -2.15
ATG11YPR049C UTP9P38882 575 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C SEC9P40357 651 aa1.6□□□□□ -2.15
ATG11YPR049C YDL183CP48569 320 aa1.6□□□□□ -2.15
ATG11YPR049C SVL3Q03088 825 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C YPR098CQ06089 161 aa1.6□□□□□ -2.15
ATG11YPR049C THP1Q08231 455 aa1.6□□□□□ -2.15
ATG11YPR049C ATX2Q12067 313 aa1.6□□□□□ -2.15
ATG11YPR049C YIL002W-AQ3E7Z5 69 aa1.6□□□□□ -2.15
ATG11YPR049C URA2P07259 2214 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C ATP6P00854 259 aa1.6□□□□□ -2.15
ATG11YPR049C APE2P32454 952 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C GLC7P32598 312 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C CPR5P35176 225 aa1.6□□□□□ -2.15
ATG11YPR049C FAR3P46671 204 aa1.6□□□□□ -2.15
ATG11YPR049C DBP6P53734 629 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C ABZ2Q03266 374 aa1.6□□□□□ -2.15
ATG11YPR049C YKU80Q04437 629 aa1.6□□□□□ -2.15
ATG11YPR049C ECM18Q04623 453 aa1.6□□□□□ -2.15
ATG11YPR049C RRP9Q06506 573 aaKnown RBP1.6□□□□□ -2.15
ATG11YPR049C CDC10P25342 322 aaKnown RBP1.59□□□□□ -2.15
ATG11YPR049C DPH5P32469 300 aaPredicted RBP1.59□□□□□ -2.15
ATG11YPR049C SEC17P32602 292 aa1.59□□□□□ -2.15
ATG11YPR049C PHO89P38361 574 aa1.59□□□□□ -2.15
ATG11YPR049C YHR180WP38868 163 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms