RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	MHF1	Q3E835	90 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	YNR034W-A	Q3E841	98 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	YPT1	P01123	206 aa	Known RBP	4.08	□□□□□ -1.76
TRM44	YPL030W	MSW1	P04803	379 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	YPR170W-B	P0C5R9	85 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	ASP3-2	P0CX77	362 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	ASP3-3	P0CX78	362 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	ASP3-4	P0CX79	362 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	ASP3-1	P0CZ17	362 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	RPB3	P16370	318 aa	Known RBP	4.08	□□□□□ -1.76
TRM44	YPL030W	NAR1	P23503	491 aa	Known RBP	4.08	□□□□□ -1.76
TRM44	YPL030W	KAR4	P25583	335 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	STP22	P25604	385 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	PPZ1	P26570	692 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	CUE1	P38428	203 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	ERG28	P40030	148 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	PIC2	P40035	300 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	TIF34	P40217	347 aa	Known RBP	4.08	□□□□□ -1.76
TRM44	YPL030W	YFL054C	P43549	646 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	YFL052W	P43551	465 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	TOS3	P43637	560 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	RMD9	P53140	646 aa	Known RBP	4.08	□□□□□ -1.76
TRM44	YPL030W	LST7	P53237	242 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	NSG2	P53898	299 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	SUR7	P54003	302 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	CYT2	Q00873	224 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	RSM23	Q01163	450 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	ECM9	Q02202	377 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	YMR130W	Q04223	302 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	YMR315W	Q04869	349 aa	Known RBP	4.08	□□□□□ -1.76
TRM44	YPL030W	MRPL35	Q06678	367 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	ENT4	Q07872	247 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	COQ10	Q08058	207 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	PEX27	Q08580	376 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	RAD28	Q12021	506 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	POM34	Q12445	299 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	SFG1	Q12507	346 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	YIL134C-A	Q45U18	67 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	YRF1-2	P40105	1681 aa		4.08	□□□□□ -1.76
TRM44	YPL030W	PAI3	P01094	68 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	VAR1	P02381	398 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	GDH1	P07262	454 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	SEC4	P07560	215 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	SPE1	P08432	466 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	HEM13	P11353	328 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	CKS1	P20486	150 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	PPH21	P23594	369 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	SRY1	P36007	326 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	MRPL11	P36521	249 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	PAC2	P39937	518 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	HPA3	P39979	161 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	SEC24	P40482	926 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	YHC3	P47040	408 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	STE24	P47154	453 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	MIC26	P50087	233 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	RTT102	P53330	157 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	ASI3	P53983	676 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	UPS3	Q04006	179 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	SEI1	Q06058	285 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	RRG8	Q06109	277 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	TPO3	Q06451	622 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	PAU23	Q07987	124 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	YPL260W	Q08977	551 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	YDL177C	Q12257	170 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	PRR2	Q12310	699 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	PAU17	Q12370	124 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	RDI1	Q12434	202 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	YPR145C-A	Q2V2P0	78 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	SUS1	Q6WNK7	96 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	Q0182	Q9ZZW1	134 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	Q0142	Q9ZZW4	58 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	SPT15	P13393	240 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	AMD1	P15274	810 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	CUP2	P15315	225 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	ERD1	P16151	362 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	GAR1	P28007	205 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	CWP1	P28319	239 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	ROT2	P38138	954 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	LSM2	P38203	95 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	LDB7	P38210	180 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	MTC4	P38335	694 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	RPS26A	P39938	119 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	RPS26B	P39939	119 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	RPL13B	P40212	199 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	LYS12	P40495	371 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	YPS6	P40583	537 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	IME4	P41833	600 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	YCH1	P42937	148 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	HSV2	P50079	448 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	THG1	P53215	237 aa	Known RBP	4.07	□□□□□ -1.76
TRM44	YPL030W	GTR2	P53290	341 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	YGR168C	P53293	376 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	GIP3	Q03016	1276 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	TVP15	Q03860	143 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	HSP31	Q04432	237 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	TEN1	Q07921	160 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	OPI10	Q08202	246 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	AIM39	Q08223	395 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	HUT1	Q12520	339 aa		4.07	□□□□□ -1.76
TRM44	YPL030W	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 54.1 ms