RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W VIK1Q12045 647 aa2.12□□□□□ -2.07
HRD3YLR207W YPR064WQ12492 139 aa2.12□□□□□ -2.07
HRD3YLR207W LAG2Q92325 660 aa2.12□□□□□ -2.07
HRD3YLR207W YAK1P14680 807 aa2.11□□□□□ -2.07
HRD3YLR207W HEM15P16622 393 aa2.11□□□□□ -2.07
HRD3YLR207W YCR099CP25657 155 aa2.11□□□□□ -2.07
HRD3YLR207W INO2P26798 304 aa2.11□□□□□ -2.07
HRD3YLR207W GDH2P33327 1092 aaKnown RBP2.11□□□□□ -2.07
HRD3YLR207W AST1P35183 429 aa2.11□□□□□ -2.07
HRD3YLR207W VPS21P36017 210 aaKnown RBP2.11□□□□□ -2.07
HRD3YLR207W ECM13P38195 257 aa2.11□□□□□ -2.07
HRD3YLR207W YFL067WP43537 175 aa2.11□□□□□ -2.07
HRD3YLR207W MST27P53176 234 aa2.11□□□□□ -2.07
HRD3YLR207W GET1P53192 235 aa2.11□□□□□ -2.07
HRD3YLR207W IMP4P53941 290 aaKnown RBP2.11□□□□□ -2.07
HRD3YLR207W PIR1Q03178 341 aa2.11□□□□□ -2.07
HRD3YLR207W YMR181CQ03231 154 aa2.11□□□□□ -2.07
HRD3YLR207W PRM15Q03262 622 aa2.11□□□□□ -2.07
HRD3YLR207W LOT6Q07923 191 aa2.11□□□□□ -2.07
HRD3YLR207W SLD7Q08457 257 aa2.11□□□□□ -2.07
HRD3YLR207W PCL9Q12477 304 aa2.11□□□□□ -2.07
HRD3YLR207W PIS1P06197 220 aaKnown RBP2.11□□□□□ -2.07
HRD3YLR207W RPL20AP0CX23 172 aaKnown RBP2.11□□□□□ -2.07
HRD3YLR207W RPL20BP0CX24 172 aaPredicted RBP2.11□□□□□ -2.07
HRD3YLR207W RPL16AP26784 199 aaKnown RBP2.11□□□□□ -2.07
HRD3YLR207W URA10P30402 227 aa2.11□□□□□ -2.07
HRD3YLR207W ETR1P38071 380 aa2.11□□□□□ -2.07
HRD3YLR207W ATG12P38316 186 aa2.11□□□□□ -2.07
HRD3YLR207W CUE1P38428 203 aa2.11□□□□□ -2.07
HRD3YLR207W MET30P39014 640 aa2.11□□□□□ -2.07
HRD3YLR207W YIL029CP40538 142 aa2.11□□□□□ -2.07
HRD3YLR207W CTK3P46963 296 aaPredicted RBP2.11□□□□□ -2.07
HRD3YLR207W ASI3P53983 676 aa2.11□□□□□ -2.07
HRD3YLR207W DIA1P54005 336 aa2.11□□□□□ -2.07
HRD3YLR207W CDC14Q00684 551 aa2.11□□□□□ -2.07
HRD3YLR207W YLR012CQ07927 99 aa2.11□□□□□ -2.07
HRD3YLR207W PLB3Q08108 686 aa2.11□□□□□ -2.07
HRD3YLR207W EAF3Q12432 401 aa2.11□□□□□ -2.07
HRD3YLR207W YKL183C-AQ3E765 70 aa2.11□□□□□ -2.07
HRD3YLR207W RPL28P02406 149 aaKnown RBP2.1□□□□□ -2.07
HRD3YLR207W SPS100P13130 326 aa2.1□□□□□ -2.07
HRD3YLR207W TFS1P14306 219 aa2.1□□□□□ -2.07
HRD3YLR207W POF1P25576 258 aa2.1□□□□□ -2.07
HRD3YLR207W SPS19P32573 292 aaKnown RBP2.1□□□□□ -2.07
HRD3YLR207W SSO1P32867 290 aa2.1□□□□□ -2.07
HRD3YLR207W NAT2P37293 288 aa2.1□□□□□ -2.07
HRD3YLR207W ARC40P38328 384 aaKnown RBP2.1□□□□□ -2.07
HRD3YLR207W EFM1P38732 585 aa2.1□□□□□ -2.07
HRD3YLR207W RTC3P38804 111 aaPredicted RBP2.1□□□□□ -2.07
HRD3YLR207W TIM17P39515 158 aa2.1□□□□□ -2.07
HRD3YLR207W HAT2P39984 401 aa2.1□□□□□ -2.07
HRD3YLR207W HEM14P40012 539 aa2.1□□□□□ -2.07
HRD3YLR207W MAM33P40513 266 aa2.1□□□□□ -2.07
HRD3YLR207W DSN1P40568 576 aa2.1□□□□□ -2.07
HRD3YLR207W HOC1P47124 396 aa2.1□□□□□ -2.07
HRD3YLR207W CWC23P52868 283 aaPredicted RBP2.1□□□□□ -2.07
HRD3YLR207W MAL13P53338 473 aa2.1□□□□□ -2.07
HRD3YLR207W GOR1P53839 350 aa2.1□□□□□ -2.07
HRD3YLR207W YNL095CP53932 642 aa2.1□□□□□ -2.07
HRD3YLR207W MRS2Q01926 470 aa2.1□□□□□ -2.07
HRD3YLR207W OSH6Q02201 448 aa2.1□□□□□ -2.07
HRD3YLR207W FAR8Q05040 523 aa2.1□□□□□ -2.07
HRD3YLR207W ATG10Q07879 167 aa2.1□□□□□ -2.07
HRD3YLR207W YLR053CQ12026 108 aa2.1□□□□□ -2.07
HRD3YLR207W SNU23Q12368 194 aaPredicted RBP2.1□□□□□ -2.07
HRD3YLR207W YMR030W-AQ3E760 96 aa2.1□□□□□ -2.07
HRD3YLR207W YCR024C-BQ3E7Z8 88 aa2.1□□□□□ -2.07
HRD3YLR207W REP1P03871 373 aa2.1□□□□□ -2.07
HRD3YLR207W SPT15P13393 240 aaKnown RBP2.1□□□□□ -2.07
HRD3YLR207W FBA1P14540 359 aaKnown RBP2.1□□□□□ -2.07
HRD3YLR207W CMK2P22517 447 aa2.1□□□□□ -2.07
HRD3YLR207W CPR3P25719 182 aa2.1□□□□□ -2.07
HRD3YLR207W PEX3P28795 441 aa2.1□□□□□ -2.07
HRD3YLR207W AGA1P32323 725 aa2.1□□□□□ -2.07
HRD3YLR207W AEP1P32493 518 aa2.1□□□□□ -2.07
HRD3YLR207W SPT4P32914 102 aaPredicted RBP2.1□□□□□ -2.07
HRD3YLR207W PMU1P36069 295 aa2.1□□□□□ -2.07
HRD3YLR207W YBR062CP38239 180 aa2.1□□□□□ -2.07
HRD3YLR207W SDS24P38314 527 aa2.1□□□□□ -2.07
HRD3YLR207W YHI9P38765 294 aa2.1□□□□□ -2.07
HRD3YLR207W PEP8P40335 379 aa2.1□□□□□ -2.07
HRD3YLR207W PMT4P46971 762 aa2.1□□□□□ -2.07
HRD3YLR207W TIS11P47977 285 aa2.1□□□□□ -2.07
HRD3YLR207W CDC123Q05791 360 aa2.1□□□□□ -2.07
HRD3YLR207W RIF2Q06208 395 aa2.1□□□□□ -2.07
HRD3YLR207W LDB18Q07887 179 aa2.1□□□□□ -2.07
HRD3YLR207W RDL2Q08742 149 aaKnown RBP2.1□□□□□ -2.07
HRD3YLR207W CSM4Q08955 156 aa2.1□□□□□ -2.07
HRD3YLR207W ATR1P13090 542 aa2.09□□□□□ -2.07
HRD3YLR207W CPR1P14832 162 aaKnown RBP2.09□□□□□ -2.07
HRD3YLR207W SNF6P18888 332 aa2.09□□□□□ -2.07
HRD3YLR207W SDH3P33421 198 aa2.09□□□□□ -2.07
HRD3YLR207W KTI12P34253 313 aaKnown RBP2.09□□□□□ -2.07
HRD3YLR207W YPC1P38298 316 aa2.09□□□□□ -2.07
HRD3YLR207W MTC4P38335 694 aaKnown RBP2.09□□□□□ -2.07
HRD3YLR207W SUR2P38992 349 aa2.09□□□□□ -2.07
HRD3YLR207W MTW1P39731 289 aa2.09□□□□□ -2.07
HRD3YLR207W PRE6P40303 254 aaKnown RBP2.09□□□□□ -2.07
HRD3YLR207W OST1P41543 476 aaKnown RBP2.09□□□□□ -2.07
HRD3YLR207W GDS1P41913 522 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms