RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YGR015CP53208 328 aa1.53□□□□□ -2.16
PRE4YFR050C CRH1P53301 507 aa1.53□□□□□ -2.16
PRE4YFR050C LSM3P57743 89 aaKnown RBP1.53□□□□□ -2.16
PRE4YFR050C RPL6AQ02326 176 aaKnown RBP1.53□□□□□ -2.16
PRE4YFR050C YMR102CQ03177 834 aa1.53□□□□□ -2.16
PRE4YFR050C RCE1Q03530 315 aa1.53□□□□□ -2.16
PRE4YFR050C YDR249CQ03787 373 aa1.53□□□□□ -2.16
PRE4YFR050C ERB1Q04660 807 aaKnown RBP1.53□□□□□ -2.16
PRE4YFR050C LCL2Q08045 131 aa1.53□□□□□ -2.16
PRE4YFR050C SLF1Q12034 447 aaKnown RBP1.53□□□□□ -2.16
PRE4YFR050C AEP3Q12089 606 aa1.53□□□□□ -2.16
PRE4YFR050C MRPL23Q12487 163 aaPredicted RBP1.53□□□□□ -2.16
PRE4YFR050C ISN1Q99312 450 aa1.53□□□□□ -2.16
PRE4YFR050C TIM9O74700 87 aa1.52□□□□□ -2.17
PRE4YFR050C RPS3P05750 240 aaKnown RBP1.52□□□□□ -2.17
PRE4YFR050C RHO1P06780 209 aaKnown RBP1.52□□□□□ -2.17
PRE4YFR050C RPS23AP0CX29 145 aaKnown RBP1.52□□□□□ -2.17
PRE4YFR050C RPS23BP0CX30 145 aa1.52□□□□□ -2.17
PRE4YFR050C EXG1P23776 448 aaKnown RBP1.52□□□□□ -2.17
PRE4YFR050C CDC50P25656 391 aa1.52□□□□□ -2.17
PRE4YFR050C ERV1P27882 189 aa1.52□□□□□ -2.17
PRE4YFR050C COX13P32799 129 aa1.52□□□□□ -2.17
PRE4YFR050C OLA1P38219 394 aaKnown RBP1.52□□□□□ -2.17
PRE4YFR050C DDI1P40087 428 aa1.52□□□□□ -2.17
PRE4YFR050C YNL208WP40159 199 aaKnown RBP1.52□□□□□ -2.17
PRE4YFR050C VHS2P40463 436 aa1.52□□□□□ -2.17
PRE4YFR050C CLD1P53264 445 aa1.52□□□□□ -2.17
PRE4YFR050C COS1P53822 381 aa1.52□□□□□ -2.17
PRE4YFR050C ARP5P53946 755 aa1.52□□□□□ -2.17
PRE4YFR050C ABZ2Q03266 374 aa1.52□□□□□ -2.17
PRE4YFR050C ECM11Q04110 302 aa1.52□□□□□ -2.17
PRE4YFR050C YPR195CQ06594 109 aa1.52□□□□□ -2.17
PRE4YFR050C VAC14Q06708 880 aa1.52□□□□□ -2.17
PRE4YFR050C ISA2Q12425 185 aa1.52□□□□□ -2.17
PRE4YFR050C YDL012CQ12489 107 aa1.52□□□□□ -2.17
PRE4YFR050C YPL229WQ99395 206 aa1.52□□□□□ -2.17
PRE4YFR050C PDE2P06776 526 aa1.51□□□□□ -2.17
PRE4YFR050C SAG1P20840 650 aa1.51□□□□□ -2.17
PRE4YFR050C ROX3P25046 220 aa1.51□□□□□ -2.17
PRE4YFR050C RIM1P32445 135 aaKnown RBP1.51□□□□□ -2.17
PRE4YFR050C MRPS9P38120 278 aa1.51□□□□□ -2.17
PRE4YFR050C ZTA1P38230 334 aaKnown RBP1.51□□□□□ -2.17
PRE4YFR050C SWC5P38326 303 aa1.51□□□□□ -2.17
PRE4YFR050C SIM1P40472 476 aa1.51□□□□□ -2.17
PRE4YFR050C ATG18P43601 500 aa1.51□□□□□ -2.17
PRE4YFR050C BNS1P50084 137 aa1.51□□□□□ -2.17
PRE4YFR050C SHE4P51534 789 aa1.51□□□□□ -2.17
PRE4YFR050C UBC13P52490 153 aa1.51□□□□□ -2.17
PRE4YFR050C TPC1P53257 314 aa1.51□□□□□ -2.17
PRE4YFR050C SPR6Q01684 191 aa1.51□□□□□ -2.17
PRE4YFR050C MRPS16Q02608 121 aa1.51□□□□□ -2.17
PRE4YFR050C SNT309Q06091 175 aaPredicted RBP1.51□□□□□ -2.17
PRE4YFR050C MCH1Q07376 486 aa1.51□□□□□ -2.17
PRE4YFR050C FRE6Q12473 712 aa1.51□□□□□ -2.17
PRE4YFR050C YCR024C-BQ3E7Z8 88 aa1.51□□□□□ -2.17
PRE4YFR050C SLM5P25345 492 aaKnown RBP1.5□□□□□ -2.17
PRE4YFR050C GPI18P38211 433 aa1.5□□□□□ -2.17
PRE4YFR050C FES1P38260 290 aa1.5□□□□□ -2.17
PRE4YFR050C YHK8P38776 514 aa1.5□□□□□ -2.17
PRE4YFR050C APS3P47064 194 aa1.5□□□□□ -2.17
PRE4YFR050C YJR149WP47177 404 aa1.5□□□□□ -2.17
PRE4YFR050C YNR064CP53750 290 aa1.5□□□□□ -2.17
PRE4YFR050C TDA1Q03533 586 aa1.5□□□□□ -2.17
PRE4YFR050C YMR244WQ04018 355 aa1.5□□□□□ -2.17
PRE4YFR050C BUR2Q05949 395 aa1.5□□□□□ -2.17
PRE4YFR050C YPR147CQ06522 304 aaKnown RBP1.5□□□□□ -2.17
PRE4YFR050C MDH1P17505 334 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
PRE4YFR050C CPR2P23285 205 aa1.49□□□□□ -2.17
PRE4YFR050C SEC14P24280 304 aaKnown RBP1.49□□□□□ -2.17
PRE4YFR050C SRL3P36167 246 aa1.49□□□□□ -2.17
PRE4YFR050C YPS5P53057 165 aa1.49□□□□□ -2.17
PRE4YFR050C LSG1P53145 640 aaKnown RBP1.49□□□□□ -2.17
PRE4YFR050C DIG2Q03373 323 aaKnown RBP1.49□□□□□ -2.17
PRE4YFR050C YMR010WQ03687 405 aa1.49□□□□□ -2.17
PRE4YFR050C YLR345WQ06137 509 aa1.49□□□□□ -2.17
PRE4YFR050C YPR091CQ06833 770 aa1.49□□□□□ -2.17
PRE4YFR050C DCI1Q08558 271 aa1.49□□□□□ -2.17
PRE4YFR050C USB1Q12208 290 aaKnown RBP1.49□□□□□ -2.17
PRE4YFR050C YBL111CQ3E7Y5 667 aa1.49□□□□□ -2.17
PRE4YFR050C RPL39P04650 51 aa1.48□□□□□ -2.17
PRE4YFR050C TPK3P05986 398 aa1.48□□□□□ -2.17
PRE4YFR050C CDC33P07260 213 aaKnown RBP1.48□□□□□ -2.17
PRE4YFR050C UNG1P12887 359 aa1.48□□□□□ -2.17
PRE4YFR050C ARO3P14843 370 aaKnown RBP1.48□□□□□ -2.17
PRE4YFR050C ZRC1P20107 442 aa1.48□□□□□ -2.17
PRE4YFR050C TRX1P22217 103 aaKnown RBP1.48□□□□□ -2.17
PRE4YFR050C PHO91P27514 894 aa1.48□□□□□ -2.17
PRE4YFR050C IME2P32581 645 aa1.48□□□□□ -2.17
PRE4YFR050C DOA1P36037 715 aa1.48□□□□□ -2.17
PRE4YFR050C RIB1P38066 345 aa1.48□□□□□ -2.17
PRE4YFR050C YSW1P38280 609 aa1.48□□□□□ -2.17
PRE4YFR050C YHR177WP38867 453 aa1.48□□□□□ -2.17
PRE4YFR050C SEC9P40357 651 aa1.48□□□□□ -2.17
PRE4YFR050C IGD1P43598 195 aa1.48□□□□□ -2.17
PRE4YFR050C YFR054CP43622 192 aa1.48□□□□□ -2.17
PRE4YFR050C AIP1P46680 615 aaKnown RBP1.48□□□□□ -2.17
PRE4YFR050C YGL262WP53054 175 aa1.48□□□□□ -2.17
PRE4YFR050C YGR111WP53265 400 aa1.48□□□□□ -2.17
PRE4YFR050C SNX41Q04053 625 aa1.48□□□□□ -2.17
PRE4YFR050C SXM1Q04175 944 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms