RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ECM25P32525 599 aa6.17□□□□□ -1.42
TDP1YBR223C MTC7P32633 139 aa6.17□□□□□ -1.42
TDP1YBR223C EMP70P32802 667 aa6.17□□□□□ -1.42
TDP1YBR223C MRT4P33201 236 aaKnown RBP6.17□□□□□ -1.42
TDP1YBR223C PPZ2P33329 710 aa6.17□□□□□ -1.42
TDP1YBR223C KAE1P36132 386 aa6.17□□□□□ -1.42
TDP1YBR223C GCV3P39726 170 aaPredicted RBP6.17□□□□□ -1.42
TDP1YBR223C IDP2P41939 412 aa6.17□□□□□ -1.42
TDP1YBR223C SPG5P42933 373 aa6.17□□□□□ -1.42
TDP1YBR223C RMD9P53140 646 aaKnown RBP6.17□□□□□ -1.42
TDP1YBR223C ERV25P54837 211 aaKnown RBP6.17□□□□□ -1.42
TDP1YBR223C SPR28Q04921 423 aa6.17□□□□□ -1.42
TDP1YBR223C RRI1Q12468 440 aa6.17□□□□□ -1.42
TDP1YBR223C HNM1P19807 563 aa6.16□□□□□ -1.42
TDP1YBR223C TIP1P27654 210 aaPredicted RBP6.16□□□□□ -1.42
TDP1YBR223C HSP150P32478 413 aa6.16□□□□□ -1.42
TDP1YBR223C EMP24P32803 203 aaKnown RBP6.16□□□□□ -1.42
TDP1YBR223C ASP1P38986 381 aaPredicted RBP6.16□□□□□ -1.42
TDP1YBR223C CFD1P40558 293 aa6.16□□□□□ -1.42
TDP1YBR223C YPS6P40583 537 aa6.16□□□□□ -1.42
TDP1YBR223C PMT3P47190 753 aa6.16□□□□□ -1.42
TDP1YBR223C SNN1P48232 102 aa6.16□□□□□ -1.42
TDP1YBR223C ECL1P48235 211 aa6.16□□□□□ -1.42
TDP1YBR223C YGL159WP53110 370 aa6.16□□□□□ -1.42
TDP1YBR223C NAM8Q00539 523 aaKnown RBP6.16□□□□□ -1.42
TDP1YBR223C SEI1Q06058 285 aa6.16□□□□□ -1.42
TDP1YBR223C MIM1Q08176 113 aa6.16□□□□□ -1.42
TDP1YBR223C SRL2Q12020 392 aa6.16□□□□□ -1.42
TDP1YBR223C REX3Q12090 404 aa6.16□□□□□ -1.42
TDP1YBR223C TFC7Q12415 435 aa6.16□□□□□ -1.42
TDP1YBR223C PET20Q99373 253 aa6.16□□□□□ -1.42
TDP1YBR223C TAD3Q9URQ3 322 aa6.16□□□□□ -1.42
TDP1YBR223C MRP2P10663 115 aaPredicted RBP6.15□□□□□ -1.42
TDP1YBR223C FRM2P37261 193 aa6.15□□□□□ -1.42
TDP1YBR223C SNO3P43544 222 aa6.15□□□□□ -1.42
TDP1YBR223C ERJ5P43613 295 aaPredicted RBP6.15□□□□□ -1.42
TDP1YBR223C YHC3P47040 408 aa6.15□□□□□ -1.42
TDP1YBR223C PHO23P50947 330 aa6.15□□□□□ -1.42
TDP1YBR223C YGR066CP53242 292 aa6.15□□□□□ -1.42
TDP1YBR223C CUZ1P53899 274 aa6.15□□□□□ -1.42
TDP1YBR223C AAH1P53909 347 aa6.15□□□□□ -1.42
TDP1YBR223C SAM50P53969 484 aa6.15□□□□□ -1.42
TDP1YBR223C SMX3P54999 86 aaPredicted RBP6.15□□□□□ -1.42
TDP1YBR223C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
TDP1YBR223C YMR210WQ03649 449 aa6.15□□□□□ -1.42
TDP1YBR223C YML018CQ03730 393 aa6.15□□□□□ -1.42
TDP1YBR223C TPP1Q03796 238 aa6.15□□□□□ -1.42
TDP1YBR223C GLK1P17709 500 aaKnown RBP6.14□□□□□ -1.43
TDP1YBR223C CPR4P25334 318 aa6.14□□□□□ -1.43
TDP1YBR223C FMT1P32785 401 aa6.14□□□□□ -1.43
TDP1YBR223C YBL010CP32788 280 aa6.14□□□□□ -1.43
TDP1YBR223C SEF1P34228 1148 aa6.14□□□□□ -1.43
TDP1YBR223C POP8P38208 133 aa6.14□□□□□ -1.43
TDP1YBR223C UMP1P38293 148 aa6.14□□□□□ -1.43
TDP1YBR223C LAG1P38703 411 aa6.14□□□□□ -1.43
TDP1YBR223C YIR035CP40579 254 aa6.14□□□□□ -1.43
TDP1YBR223C BUD8P41698 603 aa6.14□□□□□ -1.43
TDP1YBR223C SRB7P47822 140 aa6.14□□□□□ -1.43
TDP1YBR223C CAF40P53829 373 aa6.14□□□□□ -1.43
TDP1YBR223C AGE1Q04412 482 aa6.14□□□□□ -1.43
TDP1YBR223C VBA4Q04602 768 aaKnown RBP6.14□□□□□ -1.43
TDP1YBR223C YRM1Q12340 786 aa6.14□□□□□ -1.43
TDP1YBR223C TPI1P00942 248 aaKnown RBP6.14□□□□□ -1.43
TDP1YBR223C FAA1P30624 700 aaKnown RBP6.14□□□□□ -1.43
TDP1YBR223C VMA5P31412 392 aaKnown RBP6.14□□□□□ -1.43
TDP1YBR223C ISC10P32645 267 aa6.14□□□□□ -1.43
TDP1YBR223C FLO10P36170 1169 aa6.14□□□□□ -1.43
TDP1YBR223C YPC1P38298 316 aa6.14□□□□□ -1.43
TDP1YBR223C SLZ1P40167 298 aa6.14□□□□□ -1.43
TDP1YBR223C CAF16P43569 289 aa6.14□□□□□ -1.43
TDP1YBR223C MCM22P47167 239 aa6.14□□□□□ -1.43
TDP1YBR223C ACS2P52910 683 aaKnown RBP6.14□□□□□ -1.43
TDP1YBR223C YDR248CQ03786 193 aa6.14□□□□□ -1.43
TDP1YBR223C CTS2Q06350 511 aa6.14□□□□□ -1.43
TDP1YBR223C YPR147CQ06522 304 aaKnown RBP6.14□□□□□ -1.43
TDP1YBR223C GRC3Q07845 632 aa6.14□□□□□ -1.43
TDP1YBR223C HNT3Q08702 217 aa6.14□□□□□ -1.43
TDP1YBR223C FCF2Q12035 217 aaPredicted RBP6.14□□□□□ -1.43
TDP1YBR223C HMS1Q12398 434 aa6.14□□□□□ -1.43
TDP1YBR223C ERP4Q12450 207 aa6.14□□□□□ -1.43
TDP1YBR223C YLR358CO13565 187 aa6.13□□□□□ -1.43
TDP1YBR223C SNF5P18480 905 aa6.13□□□□□ -1.43
TDP1YBR223C ZRC1P20107 442 aa6.13□□□□□ -1.43
TDP1YBR223C YCR006CP25350 157 aa6.13□□□□□ -1.43
TDP1YBR223C EHD3P28817 500 aa6.13□□□□□ -1.43
TDP1YBR223C LDS1P31379 325 aa6.13□□□□□ -1.43
TDP1YBR223C ERG3P32353 365 aa6.13□□□□□ -1.43
TDP1YBR223C BUL1P48524 976 aa6.13□□□□□ -1.43
TDP1YBR223C UBP8P50102 471 aa6.13□□□□□ -1.43
TDP1YBR223C NIF3P53081 288 aa6.13□□□□□ -1.43
TDP1YBR223C YGL117WP53133 265 aa6.13□□□□□ -1.43
TDP1YBR223C PNC1P53184 216 aaKnown RBP6.13□□□□□ -1.43
TDP1YBR223C ACT1P60010 375 aaKnown RBP6.13□□□□□ -1.43
TDP1YBR223C ODC1Q03028 310 aa6.13□□□□□ -1.43
TDP1YBR223C CAB5Q03941 241 aa6.13□□□□□ -1.43
TDP1YBR223C SYM1Q06563 197 aa6.13□□□□□ -1.43
TDP1YBR223C YRA1Q12159 226 aaKnown RBP6.13□□□□□ -1.43
TDP1YBR223C MCT1Q12283 360 aa6.13□□□□□ -1.43
TDP1YBR223C PMT2P31382 759 aa6.12□□□□□ -1.43
TDP1YBR223C ARO4P32449 370 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms