RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W UBS1P38290 277 aa3.04□□□□□ -1.92
NUP60YAR002W YHR122WP38829 231 aa3.04□□□□□ -1.92
NUP60YAR002W YHR180WP38868 163 aa3.04□□□□□ -1.92
NUP60YAR002W YNL208WP40159 199 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W YIL067CP40514 678 aa3.04□□□□□ -1.92
NUP60YAR002W NAS2P40555 220 aa3.04□□□□□ -1.92
NUP60YAR002W YFR054CP43622 192 aa3.04□□□□□ -1.92
NUP60YAR002W AIM25P47140 327 aa3.04□□□□□ -1.92
NUP60YAR002W PUS4P48567 403 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W YDL183CP48569 320 aa3.04□□□□□ -1.92
NUP60YAR002W RHO5P53879 331 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W TRI1Q05024 226 aa3.04□□□□□ -1.92
NUP60YAR002W UTP21Q06078 939 aaPredicted RBP3.04□□□□□ -1.92
NUP60YAR002W MRPL51Q06090 140 aaPredicted RBP3.04□□□□□ -1.92
NUP60YAR002W PEX30Q06169 523 aa3.04□□□□□ -1.92
NUP60YAR002W NMA1Q06178 401 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W KEI1Q06346 221 aa3.04□□□□□ -1.92
NUP60YAR002W BTS1Q12051 335 aa3.04□□□□□ -1.92
NUP60YAR002W REX3Q12090 404 aa3.04□□□□□ -1.92
NUP60YAR002W RKI1Q12189 258 aa3.04□□□□□ -1.92
NUP60YAR002W INP53Q12271 1107 aa3.04□□□□□ -1.92
NUP60YAR002W HTZ1Q12692 134 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W FMP27Q06179 2628 aa3.03□□□□□ -1.92
NUP60YAR002W ARF1P11076 181 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W NHP6BP11633 99 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W CDC23P16522 626 aa3.03□□□□□ -1.92
NUP60YAR002W AIM17P23180 465 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W CPR2P23285 205 aa3.03□□□□□ -1.92
NUP60YAR002W RNA14P25298 677 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W CNE1P27825 502 aa3.03□□□□□ -1.92
NUP60YAR002W PMT2P31382 759 aa3.03□□□□□ -1.92
NUP60YAR002W UTH1P36135 365 aa3.03□□□□□ -1.92
NUP60YAR002W SDS24P38314 527 aa3.03□□□□□ -1.92
NUP60YAR002W YJL193WP39542 402 aa3.03□□□□□ -1.92
NUP60YAR002W CAT5P41735 233 aa3.03□□□□□ -1.92
NUP60YAR002W SNO3P43544 222 aa3.03□□□□□ -1.92
NUP60YAR002W CCC1P47818 322 aa3.03□□□□□ -1.92
NUP60YAR002W ASK10P48361 1146 aa3.03□□□□□ -1.92
NUP60YAR002W LYS20P48570 428 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W YGL204CP53089 101 aa3.03□□□□□ -1.92
NUP60YAR002W RPL6AQ02326 176 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W COX20Q04935 205 aa3.03□□□□□ -1.92
NUP60YAR002W MRX8Q05473 314 aa3.03□□□□□ -1.92
NUP60YAR002W YLR283WQ05867 314 aa3.03□□□□□ -1.92
NUP60YAR002W SEI1Q06058 285 aa3.03□□□□□ -1.92
NUP60YAR002W ARR3Q06598 404 aa3.03□□□□□ -1.92
NUP60YAR002W LUC7Q07508 261 aaPredicted RBP3.03□□□□□ -1.92
NUP60YAR002W YNG1Q08465 219 aa3.03□□□□□ -1.92
NUP60YAR002W RTC5Q12108 567 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W LYS21Q12122 440 aaKnown RBP3.03□□□□□ -1.92
NUP60YAR002W BBP1Q12365 385 aa3.03□□□□□ -1.92
NUP60YAR002W PRP46Q12417 451 aaPredicted RBP3.03□□□□□ -1.92
NUP60YAR002W YOS9Q99220 542 aa3.03□□□□□ -1.92
NUP60YAR002W TAD3Q9URQ3 322 aa3.03□□□□□ -1.92
NUP60YAR002W GAL1P04385 528 aa3.02□□□□□ -1.93
NUP60YAR002W STE50P25344 346 aa3.02□□□□□ -1.93
NUP60YAR002W YCP4P25349 247 aaKnown RBP3.02□□□□□ -1.93
NUP60YAR002W HSP150P32478 413 aa3.02□□□□□ -1.93
NUP60YAR002W SPT10P35208 640 aa3.02□□□□□ -1.93
NUP60YAR002W YKL063CP35725 167 aa3.02□□□□□ -1.93
NUP60YAR002W SRP102P36057 244 aaPredicted RBP3.02□□□□□ -1.93
NUP60YAR002W RRF1P38771 230 aa3.02□□□□□ -1.93
NUP60YAR002W YHR210CP38893 341 aa3.02□□□□□ -1.93
NUP60YAR002W YER184CP39961 794 aa3.02□□□□□ -1.93
NUP60YAR002W SMB1P40018 196 aaKnown RBP3.02□□□□□ -1.93
NUP60YAR002W YER137CP40083 148 aaKnown RBP3.02□□□□□ -1.93
NUP60YAR002W RFC4P40339 323 aaKnown RBP3.02□□□□□ -1.93
NUP60YAR002W SPG5P42933 373 aa3.02□□□□□ -1.93
NUP60YAR002W YGR210CP42942 411 aa3.02□□□□□ -1.93
NUP60YAR002W BRR6P53062 197 aa3.02□□□□□ -1.93
NUP60YAR002W VHT1P53241 593 aa3.02□□□□□ -1.93
NUP60YAR002W YNR071CP53757 342 aa3.02□□□□□ -1.93
NUP60YAR002W APM1Q00776 475 aaPredicted RBP3.02□□□□□ -1.93
NUP60YAR002W SCS7Q03529 384 aa3.02□□□□□ -1.93
NUP60YAR002W GIS1Q03833 894 aa3.02□□□□□ -1.93
NUP60YAR002W SNX41Q04053 625 aa3.02□□□□□ -1.93
NUP60YAR002W UTP15Q04305 513 aaKnown RBP3.02□□□□□ -1.93
NUP60YAR002W DCR2Q05924 578 aa3.02□□□□□ -1.93
NUP60YAR002W GAS2Q06135 555 aa3.02□□□□□ -1.93
NUP60YAR002W IRC19Q07843 230 aa3.02□□□□□ -1.93
NUP60YAR002W RAX1Q08760 435 aa3.02□□□□□ -1.93
NUP60YAR002W RTR2Q12378 196 aa3.02□□□□□ -1.93
NUP60YAR002W YOR343CQ12484 108 aa3.02□□□□□ -1.93
NUP60YAR002W PAR32Q12515 295 aaKnown RBP3.02□□□□□ -1.93
NUP60YAR002W YBR298C-AQ8TGK4 73 aa3.02□□□□□ -1.93
NUP60YAR002W URA3P03962 267 aa3.01□□□□□ -1.93
NUP60YAR002W OPI3P05375 206 aa3.01□□□□□ -1.93
NUP60YAR002W PPA2P28239 310 aa3.01□□□□□ -1.93
NUP60YAR002W SEF1P34228 1148 aa3.01□□□□□ -1.93
NUP60YAR002W TCM62P38228 572 aaKnown RBP3.01□□□□□ -1.93
NUP60YAR002W VMA7P39111 118 aa3.01□□□□□ -1.93
NUP60YAR002W PHM8P40025 321 aa3.01□□□□□ -1.93
NUP60YAR002W SYS1P41544 203 aa3.01□□□□□ -1.93
NUP60YAR002W QRI1P43123 477 aaKnown RBP3.01□□□□□ -1.93
NUP60YAR002W RPS0BP46654 252 aaKnown RBP3.01□□□□□ -1.93
NUP60YAR002W UBX6P47049 396 aa3.01□□□□□ -1.93
NUP60YAR002W SNX4P47057 423 aa3.01□□□□□ -1.93
NUP60YAR002W LCL3P53153 274 aa3.01□□□□□ -1.93
NUP60YAR002W FMP48P53233 369 aa3.01□□□□□ -1.93
NUP60YAR002W ASI3P53983 676 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms