RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C SLX9P53251 210 aaPredicted RBP3.59□□□□□ -1.83
SNF8YPL002C YPL039WQ03080 316 aa3.59□□□□□ -1.83
SNF8YPL002C RVB1Q03940 463 aaKnown RBP3.59□□□□□ -1.83
SNF8YPL002C DYN3Q04949 312 aa3.59□□□□□ -1.83
SNF8YPL002C SYO1Q07395 620 aa3.59□□□□□ -1.83
SNF8YPL002C MSH5Q12175 901 aa3.59□□□□□ -1.83
SNF8YPL002C YER145C-AA0A023PYF4 145 aa3.58□□□□□ -1.84
SNF8YPL002C RPL15AP05748 204 aaKnown RBP3.58□□□□□ -1.84
SNF8YPL002C CPR2P23285 205 aa3.58□□□□□ -1.84
SNF8YPL002C CLB2P24869 491 aa3.58□□□□□ -1.84
SNF8YPL002C BUD5P25300 642 aaPredicted RBP3.58□□□□□ -1.84
SNF8YPL002C RVS161P25343 265 aaKnown RBP3.58□□□□□ -1.84
SNF8YPL002C RPB9P27999 122 aa3.58□□□□□ -1.84
SNF8YPL002C CYS4P32582 507 aaKnown RBP3.58□□□□□ -1.84
SNF8YPL002C LOS1P33418 1100 aaPredicted RBP3.58□□□□□ -1.84
SNF8YPL002C YOX1P34161 385 aa3.58□□□□□ -1.84
SNF8YPL002C YOR062CP36025 268 aa3.58□□□□□ -1.84
SNF8YPL002C YBR220CP38318 560 aa3.58□□□□□ -1.84
SNF8YPL002C NSG1P38837 291 aa3.58□□□□□ -1.84
SNF8YPL002C MNN9P39107 395 aaKnown RBP3.58□□□□□ -1.84
SNF8YPL002C LYS12P40495 371 aaKnown RBP3.58□□□□□ -1.84
SNF8YPL002C UBP8P50102 471 aa3.58□□□□□ -1.84
SNF8YPL002C NOP19P53317 196 aaPredicted RBP3.58□□□□□ -1.84
SNF8YPL002C BIO4P53630 237 aa3.58□□□□□ -1.84
SNF8YPL002C MRPL50P53724 139 aa3.58□□□□□ -1.84
SNF8YPL002C RHO5P53879 331 aaKnown RBP3.58□□□□□ -1.84
SNF8YPL002C SLM2P53955 656 aa3.58□□□□□ -1.84
SNF8YPL002C ASI1P54074 624 aa3.58□□□□□ -1.84
SNF8YPL002C SWP1Q02795 286 aa3.58□□□□□ -1.84
SNF8YPL002C YMR102CQ03177 834 aa3.58□□□□□ -1.84
SNF8YPL002C ABZ2Q03266 374 aa3.58□□□□□ -1.84
SNF8YPL002C KRE28Q04431 385 aa3.58□□□□□ -1.84
SNF8YPL002C POS5Q06892 414 aa3.58□□□□□ -1.84
SNF8YPL002C NDE2Q07500 545 aa3.58□□□□□ -1.84
SNF8YPL002C YEH2Q07950 538 aa3.58□□□□□ -1.84
SNF8YPL002C SWT1Q12104 458 aa3.58□□□□□ -1.84
SNF8YPL002C CDC8P00572 216 aa3.57□□□□□ -1.84
SNF8YPL002C RPL35AP0CX84 120 aaKnown RBP3.57□□□□□ -1.84
SNF8YPL002C RPL35BP0CX85 120 aaKnown RBP3.57□□□□□ -1.84
SNF8YPL002C BAR1P12630 587 aa3.57□□□□□ -1.84
SNF8YPL002C CTA1P15202 515 aa3.57□□□□□ -1.84
SNF8YPL002C MDH2P22133 377 aa3.57□□□□□ -1.84
SNF8YPL002C DBF2P22204 572 aa3.57□□□□□ -1.84
SNF8YPL002C CMK2P22517 447 aa3.57□□□□□ -1.84
SNF8YPL002C EHD3P28817 500 aa3.57□□□□□ -1.84
SNF8YPL002C CAT2P32796 670 aaKnown RBP3.57□□□□□ -1.84
SNF8YPL002C HCS1P34243 683 aa3.57□□□□□ -1.84
SNF8YPL002C YER188WP40103 239 aa3.57□□□□□ -1.84
SNF8YPL002C RIO2P40160 425 aaKnown RBP3.57□□□□□ -1.84
SNF8YPL002C AYR1P40471 297 aa3.57□□□□□ -1.84
SNF8YPL002C FMC1P40491 155 aa3.57□□□□□ -1.84
SNF8YPL002C DUG3P53871 357 aa3.57□□□□□ -1.84
SNF8YPL002C SNX41Q04053 625 aa3.57□□□□□ -1.84
SNF8YPL002C YOL019WQ08157 551 aa3.57□□□□□ -1.84
SNF8YPL002C YOR289WQ12012 251 aaPredicted RBP3.57□□□□□ -1.84
SNF8YPL002C AEP3Q12089 606 aa3.57□□□□□ -1.84
SNF8YPL002C YDL180WQ12301 547 aa3.57□□□□□ -1.84
SNF8YPL002C YPR096CO13587 100 aa3.56□□□□□ -1.84
SNF8YPL002C RPL6BP05739 176 aaKnown RBP3.56□□□□□ -1.84
SNF8YPL002C RHO2P06781 192 aa3.56□□□□□ -1.84
SNF8YPL002C TFS1P14306 219 aa3.56□□□□□ -1.84
SNF8YPL002C ARO3P14843 370 aaKnown RBP3.56□□□□□ -1.84
SNF8YPL002C TAL1P15019 335 aaKnown RBP3.56□□□□□ -1.84
SNF8YPL002C RHB1P25378 209 aa3.56□□□□□ -1.84
SNF8YPL002C BUB2P26448 306 aaPredicted RBP3.56□□□□□ -1.84
SNF8YPL002C ATP7P30902 174 aa3.56□□□□□ -1.84
SNF8YPL002C ARO4P32449 370 aaKnown RBP3.56□□□□□ -1.84
SNF8YPL002C YKL102CP34249 101 aa3.56□□□□□ -1.84
SNF8YPL002C SOP4P39543 234 aaPredicted RBP3.56□□□□□ -1.84
SNF8YPL002C JLP2P40206 208 aa3.56□□□□□ -1.84
SNF8YPL002C YFL051CP43552 160 aa3.56□□□□□ -1.84
SNF8YPL002C FAR3P46671 204 aa3.56□□□□□ -1.84
SNF8YPL002C YJR154WP47181 346 aa3.56□□□□□ -1.84
SNF8YPL002C SBH2P52871 88 aa3.56□□□□□ -1.84
SNF8YPL002C TIM21P53220 239 aa3.56□□□□□ -1.84
SNF8YPL002C RCF2P53721 224 aa3.56□□□□□ -1.84
SNF8YPL002C DBP6P53734 629 aaKnown RBP3.56□□□□□ -1.84
SNF8YPL002C YNL181WP53878 407 aa3.56□□□□□ -1.84
SNF8YPL002C RPL6AQ02326 176 aaKnown RBP3.56□□□□□ -1.84
SNF8YPL002C INP1Q03694 420 aa3.56□□□□□ -1.84
SNF8YPL002C RAD30Q04049 632 aa3.56□□□□□ -1.84
SNF8YPL002C BNA7Q04066 261 aa3.56□□□□□ -1.84
SNF8YPL002C YDR124WQ04608 324 aa3.56□□□□□ -1.84
SNF8YPL002C YMR254CQ04838 102 aa3.56□□□□□ -1.84
SNF8YPL002C YMR310CQ04867 317 aaPredicted RBP3.56□□□□□ -1.84
SNF8YPL002C DCS1Q06151 350 aa3.56□□□□□ -1.84
SNF8YPL002C YLR036CQ07986 203 aa3.56□□□□□ -1.84
SNF8YPL002C YLR053CQ12026 108 aa3.56□□□□□ -1.84
SNF8YPL002C APC9Q12107 265 aa3.56□□□□□ -1.84
SNF8YPL002C MRPL23Q12487 163 aaPredicted RBP3.56□□□□□ -1.84
SNF8YPL002C YOL159C-AQ3E769 90 aa3.56□□□□□ -1.84
SNF8YPL002C HIS3P06633 220 aa3.55□□□□□ -1.84
SNF8YPL002C YCR051WP25631 222 aa3.55□□□□□ -1.84
SNF8YPL002C NUP2P32499 720 aa3.55□□□□□ -1.84
SNF8YPL002C RIM2P38127 377 aa3.55□□□□□ -1.84
SNF8YPL002C SPP381P38282 291 aaPredicted RBP3.55□□□□□ -1.84
SNF8YPL002C SDS24P38314 527 aa3.55□□□□□ -1.84
SNF8YPL002C YBR242WP38331 238 aa3.55□□□□□ -1.84
SNF8YPL002C ANS1P38832 159 aa3.55□□□□□ -1.84
SNF8YPL002C FAA2P39518 744 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms