RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W POP8P38208 133 aa1.69□□□□□ -2.14
PEP8YJL053W TRM7P38238 310 aaKnown RBP1.69□□□□□ -2.14
PEP8YJL053W YGL088WP53151 121 aa1.69□□□□□ -2.14
PEP8YJL053W TIM21P53220 239 aa1.69□□□□□ -2.14
PEP8YJL053W ALG9P53868 555 aaKnown RBP1.69□□□□□ -2.14
PEP8YJL053W SFH1Q06168 426 aa1.69□□□□□ -2.14
PEP8YJL053W GMC2Q06201 188 aa1.69□□□□□ -2.14
PEP8YJL053W SEC10Q06245 871 aa1.69□□□□□ -2.14
PEP8YJL053W PRR2Q12310 699 aa1.69□□□□□ -2.14
PEP8YJL053W YOS9Q99220 542 aa1.69□□□□□ -2.14
PEP8YJL053W TDH1P00360 332 aaKnown RBP1.68□□□□□ -2.14
PEP8YJL053W RPL24AP04449 155 aaKnown RBP1.68□□□□□ -2.14
PEP8YJL053W RPS3P05750 240 aaKnown RBP1.68□□□□□ -2.14
PEP8YJL053W ZWF1P11412 505 aaKnown RBP1.68□□□□□ -2.14
PEP8YJL053W MET16P18408 261 aaPredicted RBP1.68□□□□□ -2.14
PEP8YJL053W RSA4P25382 515 aaKnown RBP1.68□□□□□ -2.14
PEP8YJL053W ATG15P25641 520 aa1.68□□□□□ -2.14
PEP8YJL053W MIG1P27705 504 aa1.68□□□□□ -2.14
PEP8YJL053W YKR032WP36127 104 aa1.68□□□□□ -2.14
PEP8YJL053W PET100P38958 111 aa1.68□□□□□ -2.14
PEP8YJL053W RCY1P39531 840 aa1.68□□□□□ -2.14
PEP8YJL053W TAD2P47058 250 aa1.68□□□□□ -2.14
PEP8YJL053W GPI8P49018 411 aa1.68□□□□□ -2.14
PEP8YJL053W MIG2P53035 382 aa1.68□□□□□ -2.14
PEP8YJL053W PEX31P53203 462 aa1.68□□□□□ -2.14
PEP8YJL053W VBA1Q04301 562 aa1.68□□□□□ -2.14
PEP8YJL053W ISD11Q6Q560 94 aa1.68□□□□□ -2.14
PEP8YJL053W RRT12P25381 491 aa1.67□□□□□ -2.14
PEP8YJL053W PPQ1P32945 549 aa1.67□□□□□ -2.14
PEP8YJL053W YBL081WP38180 368 aaKnown RBP1.67□□□□□ -2.14
PEP8YJL053W RTT105P40063 208 aa1.67□□□□□ -2.14
PEP8YJL053W FMP33P46998 180 aa1.67□□□□□ -2.14
PEP8YJL053W KAP114P53067 1004 aa1.67□□□□□ -2.14
PEP8YJL053W SLX9P53251 210 aaPredicted RBP1.67□□□□□ -2.14
PEP8YJL053W CTR3Q06686 241 aa1.67□□□□□ -2.14
PEP8YJL053W HRT1Q08273 121 aa1.67□□□□□ -2.14
PEP8YJL053W FEX1Q08913 375 aa1.67□□□□□ -2.14
PEP8YJL053W FEX2Q08991 375 aa1.67□□□□□ -2.14
PEP8YJL053W TIM22Q12328 207 aa1.67□□□□□ -2.14
PEP8YJL053W PAN1P32521 1480 aa1.67□□□□□ -2.14
PEP8YJL053W TOM1Q03280 3268 aa1.67□□□□□ -2.14
PEP8YJL053W OM45P16547 393 aa1.66□□□□□ -2.14
PEP8YJL053W UTR5P32630 166 aa1.66□□□□□ -2.14
PEP8YJL053W SDH4P37298 181 aa1.66□□□□□ -2.14
PEP8YJL053W HSM3P38348 480 aa1.66□□□□□ -2.14
PEP8YJL053W SPL2P38839 148 aa1.66□□□□□ -2.14
PEP8YJL053W SPT8P38915 602 aa1.66□□□□□ -2.14
PEP8YJL053W SUR2P38992 349 aa1.66□□□□□ -2.14
PEP8YJL053W DDI1P40087 428 aa1.66□□□□□ -2.14
PEP8YJL053W SYF2P53277 215 aaPredicted RBP1.66□□□□□ -2.14
PEP8YJL053W LSB1P53281 241 aa1.66□□□□□ -2.14
PEP8YJL053W MPP6P53725 186 aaPredicted RBP1.66□□□□□ -2.14
PEP8YJL053W ATG5Q12380 294 aa1.66□□□□□ -2.14
PEP8YJL053W STH1P32597 1359 aa1.66□□□□□ -2.14
PEP8YJL053W TDH2P00358 332 aaKnown RBP1.65□□□□□ -2.15
PEP8YJL053W HIS1P00498 297 aaKnown RBP1.65□□□□□ -2.15
PEP8YJL053W MRP1P10662 321 aaKnown RBP1.65□□□□□ -2.15
PEP8YJL053W RPL4AP10664 362 aaKnown RBP1.65□□□□□ -2.15
PEP8YJL053W KRE1P17260 313 aa1.65□□□□□ -2.15
PEP8YJL053W POF1P25576 258 aa1.65□□□□□ -2.15
PEP8YJL053W MRPL37P36532 105 aa1.65□□□□□ -2.15
PEP8YJL053W NPT1P39683 429 aaKnown RBP1.65□□□□□ -2.15
PEP8YJL053W SCC4P40090 624 aa1.65□□□□□ -2.15
PEP8YJL053W RPL4BP49626 362 aaKnown RBP1.65□□□□□ -2.15
PEP8YJL053W FMP41P53889 259 aaKnown RBP1.65□□□□□ -2.15
PEP8YJL053W YNL095CP53932 642 aa1.65□□□□□ -2.15
PEP8YJL053W SDC1Q03323 175 aa1.65□□□□□ -2.15
PEP8YJL053W PEX10Q05568 337 aa1.65□□□□□ -2.15
PEP8YJL053W SME1Q12330 94 aaPredicted RBP1.65□□□□□ -2.15
PEP8YJL053W RAD3P06839 778 aa1.64□□□□□ -2.15
PEP8YJL053W RIB7P33312 244 aa1.64□□□□□ -2.15
PEP8YJL053W CSG2P35206 410 aa1.64□□□□□ -2.15
PEP8YJL053W HMT1P38074 348 aa1.64□□□□□ -2.15
PEP8YJL053W HEK2P38199 381 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
PEP8YJL053W ATG12P38316 186 aa1.64□□□□□ -2.15
PEP8YJL053W COA1P40452 197 aa1.64□□□□□ -2.15
PEP8YJL053W YJR141WP47172 347 aaPredicted RBP1.64□□□□□ -2.15
PEP8YJL053W MNT4P53745 580 aa1.64□□□□□ -2.15
PEP8YJL053W ADH6Q04894 360 aaKnown RBP1.64□□□□□ -2.15
PEP8YJL053W CLP1Q08685 445 aaPredicted RBP1.64□□□□□ -2.15
PEP8YJL053W AI5_BETAQ9ZZX0 354 aa1.64□□□□□ -2.15
PEP8YJL053W HIS3P06633 220 aa1.63□□□□□ -2.15
PEP8YJL053W SFC1P33303 322 aa1.63□□□□□ -2.15
PEP8YJL053W ARN2P38724 620 aa1.63□□□□□ -2.15
PEP8YJL053W SER33P40510 469 aa1.63□□□□□ -2.15
PEP8YJL053W YJR012CP47087 207 aa1.63□□□□□ -2.15
PEP8YJL053W OST3P48439 350 aa1.63□□□□□ -2.15
PEP8YJL053W NIF3P53081 288 aa1.63□□□□□ -2.15
PEP8YJL053W YPL039WQ03080 316 aa1.63□□□□□ -2.15
PEP8YJL053W ARV1Q06541 321 aa1.63□□□□□ -2.15
PEP8YJL053W CDD1Q06549 142 aa1.63□□□□□ -2.15
PEP8YJL053W YOL019WQ08157 551 aa1.63□□□□□ -2.15
PEP8YJL053W YPR117WQ06116 2489 aa1.62□□□□□ -2.15
PEP8YJL053W DAL82P21705 255 aa1.62□□□□□ -2.15
PEP8YJL053W DPB2P24482 689 aaPredicted RBP1.62□□□□□ -2.15
PEP8YJL053W DRE2P36152 348 aa1.62□□□□□ -2.15
PEP8YJL053W TEM1P38987 245 aa1.62□□□□□ -2.15
PEP8YJL053W PRM9P39551 298 aa1.62□□□□□ -2.15
PEP8YJL053W YER084WP40057 128 aa1.62□□□□□ -2.15
PEP8YJL053W ALG11P53954 548 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms