RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W NAT3Q06504 195 aa2.54□□□□□ -2
ECM29YHL030W PET20Q99373 253 aa2.54□□□□□ -2
ECM29YHL030W HOP09932 586 aa2.54□□□□□ -2
ECM29YHL030W MKK1P32490 508 aa2.54□□□□□ -2
ECM29YHL030W CBT1P36038 271 aaPredicted RBP2.54□□□□□ -2
ECM29YHL030W YBR071WP38243 211 aa2.54□□□□□ -2
ECM29YHL030W FMO1P38866 432 aa2.54□□□□□ -2
ECM29YHL030W RRD1P40454 393 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W YJR115WP47152 169 aa2.54□□□□□ -2
ECM29YHL030W BXI1P48558 297 aa2.54□□□□□ -2
ECM29YHL030W YGL159WP53110 370 aa2.54□□□□□ -2
ECM29YHL030W HHO1P53551 258 aa2.54□□□□□ -2
ECM29YHL030W TPP1Q03796 238 aa2.54□□□□□ -2
ECM29YHL030W MRPL1Q04599 285 aa2.54□□□□□ -2
ECM29YHL030W ROY1Q04847 553 aa2.54□□□□□ -2
ECM29YHL030W MDM30Q05930 598 aa2.54□□□□□ -2
ECM29YHL030W YLR352WQ06479 807 aa2.54□□□□□ -2
ECM29YHL030W SUT2Q12286 268 aa2.54□□□□□ -2
ECM29YHL030W MMP1Q12372 583 aa2.54□□□□□ -2
ECM29YHL030W TY1A-DR4O74302 440 aa2.54□□□□□ -2
ECM29YHL030W CYC1P00044 109 aaPredicted RBP2.54□□□□□ -2
ECM29YHL030W TY1A-HP0C2I4 478 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W TY1A-LR4P0C2I8 440 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W TY1A-AP0CX57 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-PR1P0CX58 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-ORP0CX59 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-PR2P0CX60 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-DR5P0CX65 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-ER2P0CX66 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-GR3P0CX67 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-LR1P0CX68 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-MR2P0CX69 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-DR6P0CX70 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-ER1P0CX71 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-LR2P0CX72 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-PLP0CX73 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-JR1P0CX74 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-LR3P0CX75 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-ML2P0CX76 440 aa2.54□□□□□ -2
ECM29YHL030W RNA15P25299 296 aaPredicted RBP2.54□□□□□ -2
ECM29YHL030W MOT2P34909 587 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W SHO1P40073 367 aa2.54□□□□□ -2
ECM29YHL030W VRG4P40107 337 aa2.54□□□□□ -2
ECM29YHL030W SHR5P41912 237 aa2.54□□□□□ -2
ECM29YHL030W TY1A-JR2P47099 440 aa2.54□□□□□ -2
ECM29YHL030W RPN14P53196 417 aa2.54□□□□□ -2
ECM29YHL030W SCW4P53334 386 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W YIF1P53845 314 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W FMP41P53889 259 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W AQR1P53943 586 aa2.54□□□□□ -2
ECM29YHL030W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
ECM29YHL030W PIR1Q03178 341 aa2.54□□□□□ -2
ECM29YHL030W PFA5Q03289 374 aa2.54□□□□□ -2
ECM29YHL030W YMR265CQ03508 461 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W MSS11Q03825 758 aa2.54□□□□□ -2
ECM29YHL030W TY1A-DR1Q03856 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-ML1Q04706 440 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W TPO3Q06451 622 aa2.54□□□□□ -2
ECM29YHL030W PLB3Q08108 686 aa2.54□□□□□ -2
ECM29YHL030W TY1A-GR1Q12085 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-BRQ12217 440 aa2.54□□□□□ -2
ECM29YHL030W YDR262WQ12331 272 aa2.54□□□□□ -2
ECM29YHL030W PRP46Q12417 451 aaPredicted RBP2.54□□□□□ -2
ECM29YHL030W TY1A-DR3Q12441 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-NL2Q12470 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-GR2Q12485 440 aa2.54□□□□□ -2
ECM29YHL030W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W TY1A-OLQ92392 440 aaKnown RBP2.54□□□□□ -2
ECM29YHL030W ISN1Q99312 450 aa2.54□□□□□ -2
ECM29YHL030W ARF1P11076 181 aaKnown RBP2.53□□□□□ -2
ECM29YHL030W COQ2P32378 372 aa2.53□□□□□ -2
ECM29YHL030W MKK2P32491 506 aa2.53□□□□□ -2
ECM29YHL030W MGM101P32787 269 aaKnown RBP2.53□□□□□ -2
ECM29YHL030W THI80P35202 319 aa2.53□□□□□ -2
ECM29YHL030W TRS20P38334 175 aa2.53□□□□□ -2
ECM29YHL030W YNR048WP53740 393 aa2.53□□□□□ -2
ECM29YHL030W MRPL22P53881 309 aa2.53□□□□□ -2
ECM29YHL030W ARL3Q02804 198 aa2.53□□□□□ -2
ECM29YHL030W COX20Q04935 205 aa2.53□□□□□ -2
ECM29YHL030W IRC19Q07843 230 aa2.53□□□□□ -2
ECM29YHL030W TMS1Q12116 473 aa2.53□□□□□ -2
ECM29YHL030W YOL107WQ12239 342 aa2.53□□□□□ -2
ECM29YHL030W SWI5P08153 709 aa2.53□□□□□ -2
ECM29YHL030W SPO13P23624 291 aa2.53□□□□□ -2
ECM29YHL030W MDH3P32419 343 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
ECM29YHL030W STE14P32584 239 aa2.53□□□□□ -2
ECM29YHL030W ZRT3P34240 503 aa2.53□□□□□ -2
ECM29YHL030W RMA1P36001 430 aaKnown RBP2.53□□□□□ -2
ECM29YHL030W LSM2P38203 95 aaKnown RBP2.53□□□□□ -2
ECM29YHL030W POP8P38208 133 aa2.53□□□□□ -2
ECM29YHL030W ERV15P38312 142 aa2.53□□□□□ -2
ECM29YHL030W LYS1P38998 373 aaRIP-Chip data2.53□□□□□ -2not detected
ECM29YHL030W ICE2P40499 491 aa2.53□□□□□ -2
ECM29YHL030W IKS1P47042 667 aa2.53□□□□□ -2
ECM29YHL030W YJR111CP47148 283 aaKnown RBP2.53□□□□□ -2
ECM29YHL030W TUB4P53378 473 aa2.53□□□□□ -2
ECM29YHL030W TMA23Q03525 211 aa2.53□□□□□ -2
ECM29YHL030W ELP6Q04868 273 aa2.53□□□□□ -2
ECM29YHL030W YPR127WQ06494 345 aa2.53□□□□□ -2
ECM29YHL030W YOL073CQ08232 322 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms