RNA–Protein interactions for RNA: YGR166W

TRS65, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS65, Length 1,683 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS65	YGR166W	ALK2	P32789	676 aa	Predicted RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	TIR2	P33890	251 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	ASC1	P38011	319 aa	Known RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	SHE1	P38200	338 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	FMP23	P38231	175 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	YHI9	P38765	294 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	GEP4	P38812	185 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	EDC3	P39998	551 aa	Known RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	ICE2	P40499	491 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	YJR012C	P47087	207 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	STE24	P47154	453 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	YJR141W	P47172	347 aa	Predicted RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	CDH1	P53197	566 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	YGR015C	P53208	328 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	RSM27	P53305	110 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	RET3	P53600	189 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	ACT1	P60010	375 aa	Known RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	SED1	Q01589	338 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	MIX17	Q03667	156 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	ACL4	Q03771	387 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	YMR130W	Q04223	302 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	TRM12	Q04235	462 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	TAF9	Q05027	157 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	CUR1	Q06469	252 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	RAF1	Q06891	181 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	VPS54	Q12071	889 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	ATP16	Q12165	160 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	FRE8	Q12209	686 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	MED1	Q12321	566 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	PCL9	Q12477	304 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	PAR32	Q12515	295 aa	Known RBP	0.42	□□□□□ -2.34
TRS65	YGR166W	YPL229W	Q99395	206 aa		0.42	□□□□□ -2.34
TRS65	YGR166W	JIP3	O13555	125 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	OPI3	P05375	206 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	RAD10	P06838	210 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	UNG1	P12887	359 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	SNF6	P18888	332 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	DAP2	P18962	818 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	SEC14	P24280	304 aa	Known RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	DCC1	P25559	380 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	TAH1	P25638	111 aa	Predicted RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	RPL5	P26321	297 aa	Known RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	MEI4	P29467	408 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	ERG3	P32353	365 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	TOA2	P32774	122 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	ZTA1	P38230	334 aa	Known RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	HSM3	P38348	480 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	BDH1	P39714	382 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	GIM4	P40005	111 aa	Known RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	SOK1	P40317	901 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	RFC4	P40339	323 aa	Known RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	RPA43	P46669	326 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	SOL1	P50278	321 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	NBP1	P52919	319 aa	Predicted RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	MND1	P53102	219 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	SYF2	P53277	215 aa	Predicted RBP	0.41	□□□□□ -2.34
TRS65	YGR166W	TIM13	P53299	105 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	RNH201	P53942	307 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	RGM1	Q00453	211 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	SDC1	Q03323	175 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	PEX12	Q04370	399 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	FSH2	Q05015	223 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	YLR446W	Q06204	433 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	NDL1	Q06568	189 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	ATO3	Q12359	275 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	YOP1	Q12402	180 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	GIS3	Q12418	502 aa		0.41	□□□□□ -2.34
TRS65	YGR166W	YHR214C-D	P0CX93	97 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	CKA2	P19454	339 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	MGM101	P32787	269 aa	Known RBP	0.4	□□□□□ -2.34
TRS65	YGR166W	SKT5	P34226	696 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	MRPL39	P36533	70 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	YHR045W	P38775	560 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	UTP9	P38882	575 aa	Known RBP	0.4	□□□□□ -2.34
TRS65	YGR166W	PRM9	P39551	298 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	PRP39	P39682	629 aa	Known RBP	0.4	□□□□□ -2.34
TRS65	YGR166W	UTP25	P40498	721 aa	Known RBP	0.4	□□□□□ -2.34
TRS65	YGR166W	MRPL19	P53875	158 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	TIM8	P57744	87 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	YMR111C	Q04461	462 aa	Predicted RBP	0.4	□□□□□ -2.34
TRS65	YGR166W	ROY1	Q04847	553 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	DON1	Q05610	365 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	SEI1	Q06058	285 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	PRP11	Q07350	266 aa	Predicted RBP	0.4	□□□□□ -2.34
TRS65	YGR166W	YPL150W	Q12152	901 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	RNH203	Q12338	110 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	LDB17	Q12342	491 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	AFI1	Q99222	893 aa		0.4	□□□□□ -2.34
TRS65	YGR166W	RPL35A	P0CX84	120 aa	Known RBP	0.4	□□□□□ -2.35
TRS65	YGR166W	RPL35B	P0CX85	120 aa	Known RBP	0.4	□□□□□ -2.35
TRS65	YGR166W	TFS1	P14306	219 aa		0.4	□□□□□ -2.35
TRS65	YGR166W	ERD1	P16151	362 aa		0.4	□□□□□ -2.35
TRS65	YGR166W	CPT1	P17898	393 aa		0.4	□□□□□ -2.35
TRS65	YGR166W	CLB3	P24870	427 aa		0.4	□□□□□ -2.35
TRS65	YGR166W	RAD51	P25454	400 aa		0.4	□□□□□ -2.35
TRS65	YGR166W	STP22	P25604	385 aa		0.4	□□□□□ -2.35
TRS65	YGR166W	ADE1	P27616	306 aa		0.4	□□□□□ -2.35
TRS65	YGR166W	SSE1	P32589	693 aa	Known RBP	0.4	□□□□□ -2.35
TRS65	YGR166W	PRP18	P33411	251 aa	Predicted RBP	0.4	□□□□□ -2.35
TRS65	YGR166W	YBL081W	P38180	368 aa	Known RBP	0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms