RNA–Protein interactions for RNA: YGR161C

RTS3, Transcript of Putative component of the protein phosphatase type 2A complex, yeastyeast

Gene RTS3, Length 792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTS3YGR161C SKI8Q02793 397 aaPredicted RBP2.21□□□□□ -2.06
RTS3YGR161C YMR010WQ03687 405 aa2.21□□□□□ -2.06
RTS3YGR161C GTO3Q04806 366 aa2.21□□□□□ -2.06
RTS3YGR161C ATG38Q05789 226 aaKnown RBP2.21□□□□□ -2.06
RTS3YGR161C RIF2Q06208 395 aa2.21□□□□□ -2.06
RTS3YGR161C PBP4Q07362 185 aaKnown RBP2.21□□□□□ -2.06
RTS3YGR161C BTS1Q12051 335 aa2.21□□□□□ -2.06
RTS3YGR161C MSH5Q12175 901 aa2.21□□□□□ -2.06
RTS3YGR161C SME1Q12330 94 aaPredicted RBP2.21□□□□□ -2.06
RTS3YGR161C UTP23Q12339 254 aaKnown RBP2.21□□□□□ -2.06
RTS3YGR161C SNF8Q12483 233 aa2.21□□□□□ -2.06
RTS3YGR161C CDC8P00572 216 aa2.2□□□□□ -2.06
RTS3YGR161C ILV1P00927 576 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C RPL22AP05749 121 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C STE7P06784 515 aa2.2□□□□□ -2.06
RTS3YGR161C TFS1P14306 219 aa2.2□□□□□ -2.06
RTS3YGR161C MRPS28P21771 286 aa2.2□□□□□ -2.06
RTS3YGR161C MRPL25P23369 157 aa2.2□□□□□ -2.06
RTS3YGR161C RPL24BP24000 155 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C RNA15P25299 296 aaPredicted RBP2.2□□□□□ -2.06
RTS3YGR161C GIT1P25346 518 aa2.2□□□□□ -2.06
RTS3YGR161C RPL16BP26785 198 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C SHE1P38200 338 aa2.2□□□□□ -2.06
RTS3YGR161C ECM8P38246 354 aa2.2□□□□□ -2.06
RTS3YGR161C SHE3P38272 425 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C ATG18P43601 500 aa2.2□□□□□ -2.06
RTS3YGR161C ASG7P46993 209 aa2.2□□□□□ -2.06
RTS3YGR161C TAD2P47058 250 aa2.2□□□□□ -2.06
RTS3YGR161C YJR085CP47131 105 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C ILM1P47155 203 aa2.2□□□□□ -2.06
RTS3YGR161C VHT1P53241 593 aa2.2□□□□□ -2.06
RTS3YGR161C NUP116Q02630 1113 aa2.2□□□□□ -2.06
RTS3YGR161C RNY1Q02933 434 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C EBS1Q03466 884 aaKnown RBP2.2□□□□□ -2.06
RTS3YGR161C SCS7Q03529 384 aa2.2□□□□□ -2.06
RTS3YGR161C SPO77Q06134 477 aa2.2□□□□□ -2.06
RTS3YGR161C YLR177WQ06251 628 aa2.2□□□□□ -2.06
RTS3YGR161C ASR1Q06834 288 aa2.2□□□□□ -2.06
RTS3YGR161C MFG1Q07684 458 aa2.2□□□□□ -2.06
RTS3YGR161C IRC25Q07951 179 aa2.2□□□□□ -2.06
RTS3YGR161C YPQ1Q12010 308 aa2.2□□□□□ -2.06
RTS3YGR161C TAF10Q12030 206 aa2.2□□□□□ -2.06
RTS3YGR161C ATP16Q12165 160 aa2.2□□□□□ -2.06
RTS3YGR161C MCT1Q12283 360 aa2.2□□□□□ -2.06
RTS3YGR161C YPR064WQ12492 139 aa2.2□□□□□ -2.06
RTS3YGR161C YBL111CQ3E7Y5 667 aa2.2□□□□□ -2.06
RTS3YGR161C SEY1Q99287 776 aa2.2□□□□□ -2.06
RTS3YGR161C YRF1-3P0CX14 1859 aa2.2□□□□□ -2.06
RTS3YGR161C YRF1-7P0CX15 1859 aa2.2□□□□□ -2.06
RTS3YGR161C YRF1-6P53819 1859 aa2.2□□□□□ -2.06
RTS3YGR161C HIS1P00498 297 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C TPI1P00942 248 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C CDC10P25342 322 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C PBN1P25580 416 aa2.19□□□□□ -2.06
RTS3YGR161C PEX3P28795 441 aa2.19□□□□□ -2.06
RTS3YGR161C BMH1P29311 267 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C AEP1P32493 518 aa2.19□□□□□ -2.06
RTS3YGR161C SRB4P32569 687 aa2.19□□□□□ -2.06
RTS3YGR161C KTI12P34253 313 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C YKL071WP36086 256 aa2.19□□□□□ -2.06
RTS3YGR161C MRP21P38175 177 aa2.19□□□□□ -2.06
RTS3YGR161C SIP3P38717 1229 aa2.19□□□□□ -2.06
RTS3YGR161C BIG1P38813 335 aa2.19□□□□□ -2.06
RTS3YGR161C YIA6P40556 373 aa2.19□□□□□ -2.06
RTS3YGR161C AIM23P47015 356 aa2.19□□□□□ -2.06
RTS3YGR161C YJL118WP47022 219 aa2.19□□□□□ -2.06
RTS3YGR161C HAM1P47119 197 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C HOC1P47124 396 aa2.19□□□□□ -2.06
RTS3YGR161C BNS1P50084 137 aa2.19□□□□□ -2.06
RTS3YGR161C CPD1P53314 239 aa2.19□□□□□ -2.06
RTS3YGR161C NOP13P53883 403 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
RTS3YGR161C PRP38Q00723 242 aaPredicted RBP2.19□□□□□ -2.06
RTS3YGR161C INP2Q03824 705 aa2.19□□□□□ -2.06
RTS3YGR161C ARO80Q04052 950 aa2.19□□□□□ -2.06
RTS3YGR161C YMR114CQ04471 368 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C YHC1Q05900 231 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C YPL245WQ12179 454 aaKnown RBP2.19□□□□□ -2.06
RTS3YGR161C ERP3Q12403 225 aa2.19□□□□□ -2.06
RTS3YGR161C FOL3Q12676 427 aaPredicted RBP2.19□□□□□ -2.06
RTS3YGR161C RSF2P46974 1380 aa2.19□□□□□ -2.06
RTS3YGR161C MRP1P10662 321 aaKnown RBP2.18□□□□□ -2.06
RTS3YGR161C ZRC1P20107 442 aa2.18□□□□□ -2.06
RTS3YGR161C HOM6P31116 359 aaKnown RBP2.18□□□□□ -2.06
RTS3YGR161C TPS2P31688 896 aaKnown RBP2.18□□□□□ -2.06
RTS3YGR161C CSE2P33308 149 aa2.18□□□□□ -2.06
RTS3YGR161C YBR062CP38239 180 aa2.18□□□□□ -2.06
RTS3YGR161C FZO1P38297 855 aa2.18□□□□□ -2.06
RTS3YGR161C AIM10P39965 576 aaKnown RBP2.18□□□□□ -2.06
RTS3YGR161C VAB2P40003 282 aa2.18□□□□□ -2.06
RTS3YGR161C YIL001WP40560 513 aa2.18□□□□□ -2.06
RTS3YGR161C YFR057WP43625 151 aa2.18□□□□□ -2.06
RTS3YGR161C TMA22P47089 198 aaPredicted RBP2.18□□□□□ -2.06
RTS3YGR161C TPN1P53099 579 aa2.18□□□□□ -2.06
RTS3YGR161C LIF1P53150 421 aa2.18□□□□□ -2.06
RTS3YGR161C SDS23P53172 527 aa2.18□□□□□ -2.06
RTS3YGR161C YGR015CP53208 328 aa2.18□□□□□ -2.06
RTS3YGR161C GIM3P53900 129 aa2.18□□□□□ -2.06
RTS3YGR161C YML018CQ03730 393 aa2.18□□□□□ -2.06
RTS3YGR161C ENT5Q03769 411 aaKnown RBP2.18□□□□□ -2.06
RTS3YGR161C SPC24Q04477 213 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 148 ms