RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeastyeast

Gene UBC8, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC8YEL012W CDC23P16522 626 aa3.63□□□□□ -1.83
UBC8YEL012W RVS161P25343 265 aaKnown RBP3.63□□□□□ -1.83
UBC8YEL012W PBN1P25580 416 aa3.63□□□□□ -1.83
UBC8YEL012W ITR1P30605 584 aa3.63□□□□□ -1.83
UBC8YEL012W ITR2P30606 609 aa3.63□□□□□ -1.83
UBC8YEL012W PRP21P32524 280 aaPredicted RBP3.63□□□□□ -1.83
UBC8YEL012W RPN2P32565 945 aaKnown RBP3.63□□□□□ -1.83
UBC8YEL012W LHP1P33399 275 aaKnown RBP3.63□□□□□ -1.83
UBC8YEL012W SWH1P35845 1188 aa3.63□□□□□ -1.83
UBC8YEL012W COS9P36034 407 aa3.63□□□□□ -1.83
UBC8YEL012W MRPL39P36533 70 aa3.63□□□□□ -1.83
UBC8YEL012W SLM4P38247 162 aa3.63□□□□□ -1.83
UBC8YEL012W YBR220CP38318 560 aa3.63□□□□□ -1.83
UBC8YEL012W RFC4P40339 323 aaKnown RBP3.63□□□□□ -1.83
UBC8YEL012W GPI1P53306 609 aa3.63□□□□□ -1.83
UBC8YEL012W DBP6P53734 629 aaKnown RBP3.63□□□□□ -1.83
UBC8YEL012W GOR1P53839 350 aa3.63□□□□□ -1.83
UBC8YEL012W CIK1Q01649 594 aa3.63□□□□□ -1.83
UBC8YEL012W YPL039WQ03080 316 aa3.63□□□□□ -1.83
UBC8YEL012W ACL4Q03771 387 aa3.63□□□□□ -1.83
UBC8YEL012W PML1Q07930 204 aaPredicted RBP3.63□□□□□ -1.83
UBC8YEL012W SGT1Q08446 395 aa3.63□□□□□ -1.83
UBC8YEL012W MSA1Q08471 629 aa3.63□□□□□ -1.83
UBC8YEL012W RKM1Q08961 583 aaPredicted RBP3.63□□□□□ -1.83
UBC8YEL012W MED2Q12124 431 aa3.63□□□□□ -1.83
UBC8YEL012W YDL180WQ12301 547 aa3.63□□□□□ -1.83
UBC8YEL012W PSY3Q12318 242 aa3.63□□□□□ -1.83
UBC8YEL012W UTR1P21373 530 aa3.62□□□□□ -1.83
UBC8YEL012W DBF2P22204 572 aa3.62□□□□□ -1.83
UBC8YEL012W CTR86P25355 563 aa3.62□□□□□ -1.83
UBC8YEL012W EHD3P28817 500 aa3.62□□□□□ -1.83
UBC8YEL012W HIR2P32480 875 aa3.62□□□□□ -1.83
UBC8YEL012W NUP2P32499 720 aa3.62□□□□□ -1.83
UBC8YEL012W SIP2P34164 415 aaKnown RBP3.62□□□□□ -1.83
UBC8YEL012W YHR180WP38868 163 aa3.62□□□□□ -1.83
UBC8YEL012W POP1P41812 875 aa3.62□□□□□ -1.83
UBC8YEL012W RMD9P53140 646 aaKnown RBP3.62□□□□□ -1.83
UBC8YEL012W SYF2P53277 215 aaPredicted RBP3.62□□□□□ -1.83
UBC8YEL012W FMP42Q04991 504 aa3.62□□□□□ -1.83
UBC8YEL012W ARV1Q06541 321 aa3.62□□□□□ -1.83
UBC8YEL012W ARR1Q06596 294 aa3.62□□□□□ -1.83
UBC8YEL012W BTS1Q12051 335 aa3.62□□□□□ -1.83
UBC8YEL012W RNH203Q12338 110 aa3.62□□□□□ -1.83
UBC8YEL012W YAL064W-BO13512 126 aa3.61□□□□□ -1.83
UBC8YEL012W CAR2P07991 424 aaKnown RBP3.61□□□□□ -1.83
UBC8YEL012W MRS3P10566 314 aa3.61□□□□□ -1.83
UBC8YEL012W RNA1P11745 407 aaKnown RBP3.61□□□□□ -1.83
UBC8YEL012W DTR1P38125 572 aa3.61□□□□□ -1.83
UBC8YEL012W NTC20P38302 140 aaPredicted RBP3.61□□□□□ -1.83
UBC8YEL012W ECM14P38836 430 aa3.61□□□□□ -1.83
UBC8YEL012W YIL029CP40538 142 aa3.61□□□□□ -1.83
UBC8YEL012W GAB1P41733 394 aa3.61□□□□□ -1.83
UBC8YEL012W MOB2P43563 287 aa3.61□□□□□ -1.83
UBC8YEL012W CUS2P53830 285 aaPredicted RBP3.61□□□□□ -1.83
UBC8YEL012W MTQ1P53944 314 aa3.61□□□□□ -1.83
UBC8YEL012W YLR281CQ05863 155 aa3.61□□□□□ -1.83
UBC8YEL012W YTH1Q06102 208 aaPredicted RBP3.61□□□□□ -1.83
UBC8YEL012W UAF30Q08747 228 aa3.61□□□□□ -1.83
UBC8YEL012W YDL009CQ12210 107 aa3.61□□□□□ -1.83
UBC8YEL012W RPN6Q12377 434 aa3.61□□□□□ -1.83
UBC8YEL012W SAS5Q99314 248 aa3.61□□□□□ -1.83
UBC8YEL012W CAR1P00812 333 aaKnown RBP3.6□□□□□ -1.83
UBC8YEL012W RHO1P06780 209 aaKnown RBP3.6□□□□□ -1.83
UBC8YEL012W MER1P16523 270 aa3.6□□□□□ -1.83
UBC8YEL012W ERD2P18414 219 aa3.6□□□□□ -1.83
UBC8YEL012W YCR022CP25620 114 aa3.6□□□□□ -1.83
UBC8YEL012W DAL80P26343 269 aa3.6□□□□□ -1.83
UBC8YEL012W MRPL17P36528 281 aa3.6□□□□□ -1.83
UBC8YEL012W ZTA1P38230 334 aaKnown RBP3.6□□□□□ -1.83
UBC8YEL012W RGI1P40043 161 aaPredicted RBP3.6□□□□□ -1.83
UBC8YEL012W SAS2P40963 338 aa3.6□□□□□ -1.83
UBC8YEL012W TRS85P46944 698 aa3.6□□□□□ -1.83
UBC8YEL012W SHE4P51534 789 aa3.6□□□□□ -1.83
UBC8YEL012W SED1Q01589 338 aa3.6□□□□□ -1.83
UBC8YEL012W YDR476CQ03362 224 aa3.6□□□□□ -1.83
UBC8YEL012W VPS60Q03390 229 aa3.6□□□□□ -1.83
UBC8YEL012W YDR415CQ04033 374 aaPredicted RBP3.6□□□□□ -1.83
UBC8YEL012W RNH1Q04740 348 aa3.6□□□□□ -1.83
UBC8YEL012W FAR8Q05040 523 aa3.6□□□□□ -1.83
UBC8YEL012W MRPL51Q06090 140 aaPredicted RBP3.6□□□□□ -1.83
UBC8YEL012W MCP1Q12106 302 aa3.6□□□□□ -1.83
UBC8YEL012W CCA1P21269 546 aa3.59□□□□□ -1.83
UBC8YEL012W RPB9P27999 122 aa3.59□□□□□ -1.83
UBC8YEL012W SSE1P32589 693 aaKnown RBP3.59□□□□□ -1.83
UBC8YEL012W FRE2P36033 711 aa3.59□□□□□ -1.83
UBC8YEL012W YER084WP40057 128 aa3.59□□□□□ -1.83
UBC8YEL012W YIR020CP40575 100 aa3.59□□□□□ -1.83
UBC8YEL012W GDS1P41913 522 aa3.59□□□□□ -1.83
UBC8YEL012W HOT1Q03213 719 aa3.59□□□□□ -1.83
UBC8YEL012W DCS1Q06151 350 aa3.59□□□□□ -1.83
UBC8YEL012W SFH1Q06168 426 aa3.59□□□□□ -1.83
UBC8YEL012W BRX1Q08235 291 aaKnown RBP3.59□□□□□ -1.83
UBC8YEL012W YDL109CQ12103 647 aa3.59□□□□□ -1.83
UBC8YEL012W RTR2Q12378 196 aa3.59□□□□□ -1.83
UBC8YEL012W NOT5Q12514 560 aaPredicted RBP3.59□□□□□ -1.83
UBC8YEL012W RRP7P25368 297 aaPredicted RBP3.58□□□□□ -1.84
UBC8YEL012W RHB1P25378 209 aa3.58□□□□□ -1.84
UBC8YEL012W LTV1P34078 463 aa3.58□□□□□ -1.84
UBC8YEL012W RRP4P38792 359 aaKnown RBP3.58□□□□□ -1.84
UBC8YEL012W DIM1P41819 318 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms