RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W RPN6Q12377 434 aa1.99□□□□□ -2.09
SSF2YDR312W YAL067W-AQ8TGK6 75 aa1.99□□□□□ -2.09
SSF2YDR312W IZH4Q99393 312 aa1.99□□□□□ -2.09
SSF2YDR312W HFA1P32874 2273 aa1.99□□□□□ -2.09
SSF2YDR312W LAA1P39526 2014 aa1.99□□□□□ -2.09
SSF2YDR312W RPL4AP10664 362 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W CKA2P19454 339 aa1.98□□□□□ -2.09
SSF2YDR312W RPC25P35718 212 aa1.98□□□□□ -2.09
SSF2YDR312W YMR262WP38430 313 aa1.98□□□□□ -2.09
SSF2YDR312W PET100P38958 111 aa1.98□□□□□ -2.09
SSF2YDR312W GAA1P39012 614 aa1.98□□□□□ -2.09
SSF2YDR312W COQ5P49017 307 aa1.98□□□□□ -2.09
SSF2YDR312W RPL4BP49626 362 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W KEL2P50090 882 aa1.98□□□□□ -2.09
SSF2YDR312W RIB4P50861 169 aaPredicted RBP1.98□□□□□ -2.09
SSF2YDR312W SWS2P53937 143 aa1.98□□□□□ -2.09
SSF2YDR312W API2Q04413 109 aa1.98□□□□□ -2.09
SSF2YDR312W CUR1Q06469 252 aa1.98□□□□□ -2.09
SSF2YDR312W VAC14Q06708 880 aa1.98□□□□□ -2.09
SSF2YDR312W YOL029CQ08187 201 aa1.98□□□□□ -2.09
SSF2YDR312W SAM4Q08985 325 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W TAF10Q12030 206 aa1.98□□□□□ -2.09
SSF2YDR312W PAA1Q12447 191 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W YPR1Q12458 312 aa1.98□□□□□ -2.09
SSF2YDR312W BRR2P32639 2163 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W RIF1P29539 1916 aa1.98□□□□□ -2.09
SSF2YDR312W CAR2P07991 424 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W ZIP1P31111 875 aa1.98□□□□□ -2.09
SSF2YDR312W VPH2P32341 215 aa1.98□□□□□ -2.09
SSF2YDR312W GCG1P32656 232 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W TKL2P33315 681 aa1.98□□□□□ -2.09
SSF2YDR312W CBF5P33322 483 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SSF2YDR312W CTM1P38818 585 aa1.98□□□□□ -2.09
SSF2YDR312W AVT2P39981 480 aa1.98□□□□□ -2.09
SSF2YDR312W CIS3P47001 227 aa1.98□□□□□ -2.09
SSF2YDR312W GTO1P48239 356 aa1.98□□□□□ -2.09
SSF2YDR312W SDS23P53172 527 aa1.98□□□□□ -2.09
SSF2YDR312W SWC4P53201 476 aa1.98□□□□□ -2.09
SSF2YDR312W DBP6P53734 629 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W ERV25P54837 211 aaKnown RBP1.98□□□□□ -2.09
SSF2YDR312W YPL077CQ02831 240 aa1.98□□□□□ -2.09
SSF2YDR312W RSM10Q03201 203 aa1.98□□□□□ -2.09
SSF2YDR312W ABZ2Q03266 374 aa1.98□□□□□ -2.09
SSF2YDR312W VTI1Q04338 217 aa1.98□□□□□ -2.09
SSF2YDR312W YML096WQ04489 525 aa1.98□□□□□ -2.09
SSF2YDR312W ERV41Q04651 352 aa1.98□□□□□ -2.09
SSF2YDR312W MMT2Q08970 484 aa1.98□□□□□ -2.09
SSF2YDR312W GPM2Q12008 311 aa1.98□□□□□ -2.09
SSF2YDR312W PFK27Q12471 397 aaPredicted RBP1.98□□□□□ -2.09
SSF2YDR312W POL2P21951 2222 aaKnown RBP1.97□□□□□ -2.09
SSF2YDR312W SAL1D6W196 494 aa1.97□□□□□ -2.09
SSF2YDR312W TCP1P12612 559 aaKnown RBP1.97□□□□□ -2.09
SSF2YDR312W UGA1P17649 471 aa1.97□□□□□ -2.09
SSF2YDR312W DBP3P20447 523 aaKnown RBP1.97□□□□□ -2.09
SSF2YDR312W FMT1P32785 401 aa1.97□□□□□ -2.09
SSF2YDR312W ZRT1P32804 376 aa1.97□□□□□ -2.09
SSF2YDR312W PRY2P36110 329 aa1.97□□□□□ -2.09
SSF2YDR312W TDA11P38854 504 aa1.97□□□□□ -2.09
SSF2YDR312W PEX18P38855 283 aa1.97□□□□□ -2.09
SSF2YDR312W YIL054WP40524 105 aa1.97□□□□□ -2.09
SSF2YDR312W PFS2P42841 465 aaKnown RBP1.97□□□□□ -2.09
SSF2YDR312W YNL260CP53846 198 aa1.97□□□□□ -2.09
SSF2YDR312W SNX41Q04053 625 aa1.97□□□□□ -2.09
SSF2YDR312W GMC1Q04399 608 aa1.97□□□□□ -2.09
SSF2YDR312W GPN3Q06543 272 aa1.97□□□□□ -2.09
SSF2YDR312W VIK1Q12045 647 aa1.97□□□□□ -2.09
SSF2YDR312W YRA1Q12159 226 aaKnown RBP1.97□□□□□ -2.09
SSF2YDR312W YOR097CQ12274 175 aaPredicted RBP1.97□□□□□ -2.09
SSF2YDR312W UTP23Q12339 254 aaKnown RBP1.97□□□□□ -2.09
SSF2YDR312W PRM7Q12459 698 aa1.97□□□□□ -2.09
SSF2YDR312W TPS2P31688 896 aaKnown RBP1.96□□□□□ -2.1
SSF2YDR312W MCH2P36032 473 aa1.96□□□□□ -2.1
SSF2YDR312W TAE1P38340 232 aa1.96□□□□□ -2.1
SSF2YDR312W RCK1P38622 512 aa1.96□□□□□ -2.1
SSF2YDR312W FET3P38993 636 aa1.96□□□□□ -2.1
SSF2YDR312W SOP4P39543 234 aaPredicted RBP1.96□□□□□ -2.1
SSF2YDR312W SHQ1P40486 507 aaPredicted RBP1.96□□□□□ -2.1
SSF2YDR312W DSN1P40568 576 aa1.96□□□□□ -2.1
SSF2YDR312W UFE1P41834 346 aa1.96□□□□□ -2.1
SSF2YDR312W HIT1P46973 164 aa1.96□□□□□ -2.1
SSF2YDR312W NOP13P53883 403 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SSF2YDR312W PGA2P53903 129 aa1.96□□□□□ -2.1
SSF2YDR312W YLR413WQ06689 675 aa1.96□□□□□ -2.1
SSF2YDR312W YOL024WQ08172 172 aa1.96□□□□□ -2.1
SSF2YDR312W YDR018CQ12185 396 aa1.96□□□□□ -2.1
SSF2YDR312W SEC16P48415 2195 aaKnown RBP1.95□□□□□ -2.1
SSF2YDR312W ATP6P00854 259 aa1.95□□□□□ -2.1
SSF2YDR312W ERD1P16151 362 aa1.95□□□□□ -2.1
SSF2YDR312W CWP1P28319 239 aa1.95□□□□□ -2.1
SSF2YDR312W YKL162CP36052 402 aa1.95□□□□□ -2.1
SSF2YDR312W SER33P40510 469 aa1.95□□□□□ -2.1
SSF2YDR312W BIO4P53630 237 aa1.95□□□□□ -2.1
SSF2YDR312W HST4P53688 370 aa1.95□□□□□ -2.1
SSF2YDR312W YLR446WQ06204 433 aa1.95□□□□□ -2.1
SSF2YDR312W BER1Q06688 274 aaKnown RBP1.95□□□□□ -2.1
SSF2YDR312W APC9Q12107 265 aa1.95□□□□□ -2.1
SSF2YDR312W SGT2Q12118 346 aaKnown RBP1.95□□□□□ -2.1
SSF2YDR312W RRP42Q12277 265 aaPredicted RBP1.95□□□□□ -2.1
SSF2YDR312W TRM10Q12400 293 aa1.95□□□□□ -2.1
SSF2YDR312W RAD7P06779 565 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms