RNA–Protein interactions for RNA: YBR173C

UMP1, Transcript of Chaperone required for correct maturation of the 20S proteasome, yeast

Gene UMP1, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UMP1	YBR173C	BRR6	P53062	197 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	SNZ1	Q03148	297 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	SDC1	Q03323	175 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	YDR249C	Q03787	373 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	SNO4	Q04902	237 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	BUR2	Q05949	395 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	YLR345W	Q06137	509 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	SNA4	Q07549	140 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	GSH2	Q08220	491 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	HRT1	Q08273	121 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	RDL2	Q08742	149 aa	Known RBP	4.11	□□□□□ -1.75
UMP1	YBR173C	HSP33	Q08914	237 aa	Known RBP	4.11	□□□□□ -1.75
UMP1	YBR173C	UIP4	Q08926	304 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	HSP32	Q08992	237 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	NKP1	Q12493	238 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	YPL119C-A	Q3E751	87 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	MTR10	Q99189	972 aa		4.11	□□□□□ -1.75
UMP1	YBR173C	SEC16	P48415	2195 aa	Known RBP	4.1	□□□□□ -1.75
UMP1	YBR173C	GAL1	P04385	528 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	MET2	P08465	486 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	TFS1	P14306	219 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	PRP21	P32524	280 aa	Predicted RBP	4.1	□□□□□ -1.75
UMP1	YBR173C	SLC1	P33333	303 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	LHS1	P36016	881 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	FET3	P38993	636 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	PCL6	P40038	420 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	YGL235W	P53071	178 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	YGR126W	P53274	230 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	COG5	P53951	403 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	CAC2	Q04199	468 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	SEC13	Q04491	297 aa	Known RBP	4.1	□□□□□ -1.75
UMP1	YBR173C	ELP6	Q04868	273 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	SNT309	Q06091	175 aa	Predicted RBP	4.1	□□□□□ -1.75
UMP1	YBR173C	YLR352W	Q06479	807 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	YPR127W	Q06494	345 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	YDL218W	Q07629	317 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	PST2	Q12335	198 aa	Known RBP	4.1	□□□□□ -1.75
UMP1	YBR173C	Q0144	Q9ZZW2	109 aa		4.1	□□□□□ -1.75
UMP1	YBR173C	YAL064W-B	O13512	126 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	MDH2	P22133	377 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	CPR2	P23285	205 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	SCO1	P23833	295 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	EHD3	P28817	500 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	ERG9	P29704	444 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	ATS1	P31386	333 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	OAC1	P32332	324 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
UMP1	YBR173C	YEF1	P32622	495 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	COS9	P36034	407 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	YKL071W	P36086	256 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	CHL4	P38907	458 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
UMP1	YBR173C	SOP4	P39543	234 aa	Predicted RBP	4.09	□□□□□ -1.75
UMP1	YBR173C	ISC1	P40015	477 aa	Known RBP	4.09	□□□□□ -1.75
UMP1	YBR173C	KRE29	P40026	464 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	AVT6	P40074	448 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	MSS2	P40990	351 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	STB1	P42845	420 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	YGL101W	P53144	215 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	RRN9	P53437	365 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	PGA1	P53896	198 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	TLG1	Q03322	224 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	OST6	Q03723	332 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	IRC19	Q07843	230 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	COQ10	Q08058	207 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	SWT1	Q12104	458 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	SIA1	Q12212	622 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	RLM1	Q12224	676 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	APC2	Q12440	853 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	YOR343C	Q12484	108 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	FLO9	P39712	1322 aa		4.09	□□□□□ -1.75
UMP1	YBR173C	KIN28	P06242	306 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	DPM1	P14020	267 aa	Known RBP	4.08	□□□□□ -1.76
UMP1	YBR173C	PDX1	P16451	410 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	IDP1	P21954	428 aa	Known RBP	4.08	□□□□□ -1.76
UMP1	YBR173C	PPA2	P28239	310 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	NDC1	P32500	655 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	TRS65	P32893	560 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	GPX1	P36014	167 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	ECM4	P36156	370 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	MEC1	P38111	2368 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	ARN2	P38724	620 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	RFC4	P40339	323 aa	Known RBP	4.08	□□□□□ -1.76
UMP1	YBR173C	OGG1	P53397	376 aa	Predicted RBP	4.08	□□□□□ -1.76
UMP1	YBR173C	MPP6	P53725	186 aa	Predicted RBP	4.08	□□□□□ -1.76
UMP1	YBR173C	YPL039W	Q03080	316 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	SCS7	Q03529	384 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	FIN1	Q03898	291 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	POS5	Q06892	414 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	HNT3	Q08702	217 aa		4.08	□□□□□ -1.76
UMP1	YBR173C	YGK3	Q12222	375 aa	Predicted RBP	4.08	□□□□□ -1.76
UMP1	YBR173C	CDC39	P25655	2108 aa	Known RBP	4.07	□□□□□ -1.76
UMP1	YBR173C	MET17	P06106	444 aa		4.07	□□□□□ -1.76
UMP1	YBR173C	PEP4	P07267	405 aa	Known RBP	4.07	□□□□□ -1.76
UMP1	YBR173C	NFT1	P0CE68	1218 aa		4.07	□□□□□ -1.76
UMP1	YBR173C	PUP2	P32379	260 aa		4.07	□□□□□ -1.76
UMP1	YBR173C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
UMP1	YBR173C	ARC40	P38328	384 aa	Known RBP	4.07	□□□□□ -1.76
UMP1	YBR173C	YHR035W	P38769	630 aa		4.07	□□□□□ -1.76
UMP1	YBR173C	IPT1	P38954	527 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 146.2 ms