RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W YDR262WQ12331 272 aa0.52□□□□□ -2.33
SEC8YPR055W BCK1Q01389 1478 aa0.52□□□□□ -2.33
SEC8YPR055W VPS1P21576 704 aaKnown RBP0.52□□□□□ -2.33
SEC8YPR055W BUD2P33314 1104 aa0.52□□□□□ -2.33
SEC8YPR055W YKL187CP34231 750 aa0.52□□□□□ -2.33
SEC8YPR055W YMR134WP40207 237 aa0.52□□□□□ -2.33
SEC8YPR055W SSU72P53538 206 aaPredicted RBP0.52□□□□□ -2.33
SEC8YPR055W YNL040WP53960 456 aaPredicted RBP0.52□□□□□ -2.33
SEC8YPR055W YPL113CQ02961 396 aa0.52□□□□□ -2.33
SEC8YPR055W IRC4Q03036 179 aa0.52□□□□□ -2.33
SEC8YPR055W SNX41Q04053 625 aa0.52□□□□□ -2.33
SEC8YPR055W TAZ1Q06510 381 aa0.52□□□□□ -2.33
SEC8YPR055W TRM10Q12400 293 aa0.52□□□□□ -2.33
SEC8YPR055W ERP3Q12403 225 aa0.52□□□□□ -2.33
SEC8YPR055W SPT7P35177 1332 aa0.52□□□□□ -2.33
SEC8YPR055W SCC2Q04002 1493 aa0.52□□□□□ -2.33
SEC8YPR055W YCF1P39109 1515 aaKnown RBP0.52□□□□□ -2.33
SEC8YPR055W RBK1P25332 333 aa0.51□□□□□ -2.33
SEC8YPR055W DCC1P25559 380 aa0.51□□□□□ -2.33
SEC8YPR055W CDC13P32797 924 aaKnown RBP0.51□□□□□ -2.33
SEC8YPR055W LIN1P38852 340 aaPredicted RBP0.51□□□□□ -2.33
SEC8YPR055W YFL040WP43562 540 aa0.51□□□□□ -2.33
SEC8YPR055W YGR266WP53326 701 aa0.51□□□□□ -2.33
SEC8YPR055W DIB1Q06819 143 aaPredicted RBP0.51□□□□□ -2.33
SEC8YPR055W NBL1Q3E7Y6 73 aa0.51□□□□□ -2.33
SEC8YPR055W CHD1P32657 1468 aa0.51□□□□□ -2.33
SEC8YPR055W PMD1P32634 1753 aa0.51□□□□□ -2.33
SEC8YPR055W IMP1P28627 190 aa0.51□□□□□ -2.33
SEC8YPR055W SOP4P39543 234 aaPredicted RBP0.51□□□□□ -2.33
SEC8YPR055W OSH6Q02201 448 aa0.51□□□□□ -2.33
SEC8YPR055W CAB5Q03941 241 aa0.51□□□□□ -2.33
SEC8YPR055W YDR114CQ04597 100 aa0.51□□□□□ -2.33
SEC8YPR055W UTP23Q12339 254 aaKnown RBP0.51□□□□□ -2.33
SEC8YPR055W PRM4Q12498 284 aa0.51□□□□□ -2.33
SEC8YPR055W LAG2Q92325 660 aa0.51□□□□□ -2.33
SEC8YPR055W DYN1P36022 4092 aa0.51□□□□□ -2.33
SEC8YPR055W TDH2P00358 332 aaKnown RBP0.51□□□□□ -2.33
SEC8YPR055W TDH3P00359 332 aaKnown RBP RIP-Chip data0.51□□□□□ -2.33not detected
SEC8YPR055W YEL043WP32618 956 aa0.51□□□□□ -2.33
SEC8YPR055W END3P39013 349 aa0.51□□□□□ -2.33
SEC8YPR055W YFR045WP43617 309 aa0.51□□□□□ -2.33
SEC8YPR055W ARC18Q05933 178 aaKnown RBP0.51□□□□□ -2.33
SEC8YPR055W YLR012CQ07927 99 aa0.51□□□□□ -2.33
SEC8YPR055W FEX1Q08913 375 aa0.51□□□□□ -2.33
SEC8YPR055W SAM4Q08985 325 aaKnown RBP0.51□□□□□ -2.33
SEC8YPR055W FEX2Q08991 375 aa0.51□□□□□ -2.33
SEC8YPR055W SGT2Q12118 346 aaKnown RBP0.51□□□□□ -2.33
SEC8YPR055W YPL245WQ12179 454 aaKnown RBP0.51□□□□□ -2.33
SEC8YPR055W YPR1Q12458 312 aa0.51□□□□□ -2.33
SEC8YPR055W MRX4Q12467 430 aa0.51□□□□□ -2.33
SEC8YPR055W SMC4Q12267 1418 aa0.5□□□□□ -2.33
SEC8YPR055W DUR1,2P32528 1835 aaKnown RBP0.5□□□□□ -2.33
SEC8YPR055W YAK1P14680 807 aa0.5□□□□□ -2.33
SEC8YPR055W BLI1P35727 113 aa0.5□□□□□ -2.33
SEC8YPR055W YKR032WP36127 104 aa0.5□□□□□ -2.33
SEC8YPR055W SWC5P38326 303 aa0.5□□□□□ -2.33
SEC8YPR055W AVT7P40501 490 aa0.5□□□□□ -2.33
SEC8YPR055W MIG2P53035 382 aa0.5□□□□□ -2.33
SEC8YPR055W UFD1P53044 361 aa0.5□□□□□ -2.33
SEC8YPR055W TPN1P53099 579 aa0.5□□□□□ -2.33
SEC8YPR055W MRS2Q01926 470 aa0.5□□□□□ -2.33
SEC8YPR055W UBX2Q04228 584 aa0.5□□□□□ -2.33
SEC8YPR055W VTI1Q04338 217 aa0.5□□□□□ -2.33
SEC8YPR055W CDD1Q06549 142 aa0.5□□□□□ -2.33
SEC8YPR055W PAA1Q12447 191 aaKnown RBP0.5□□□□□ -2.33
SEC8YPR055W PFK27Q12471 397 aaPredicted RBP0.5□□□□□ -2.33
SEC8YPR055W RNR2P09938 399 aaKnown RBP0.5□□□□□ -2.33
SEC8YPR055W SNF6P18888 332 aa0.5□□□□□ -2.33
SEC8YPR055W TRX1P22217 103 aaKnown RBP0.5□□□□□ -2.33
SEC8YPR055W RPL16BP26785 198 aaKnown RBP0.5□□□□□ -2.33
SEC8YPR055W MRPL6P32904 214 aa0.5□□□□□ -2.33
SEC8YPR055W MIC19P43594 170 aa0.5□□□□□ -2.33
SEC8YPR055W YGR016WP53209 190 aa0.5□□□□□ -2.33
SEC8YPR055W ALG9P53868 555 aaKnown RBP0.5□□□□□ -2.33
SEC8YPR055W CSI1Q04368 295 aa0.5□□□□□ -2.33
SEC8YPR055W VIK1Q12045 647 aa0.5□□□□□ -2.33
SEC8YPR055W VTH1P40438 1549 aa0.5□□□□□ -2.33
SEC8YPR055W VTH2P40890 1549 aa0.5□□□□□ -2.33
SEC8YPR055W SPP41P38904 1435 aa0.5□□□□□ -2.33
SEC8YPR055W TPO5P36029 618 aa0.49□□□□□ -2.33
SEC8YPR055W GDS1P41913 522 aa0.49□□□□□ -2.33
SEC8YPR055W PRP24P49960 444 aaKnown RBP0.49□□□□□ -2.33
SEC8YPR055W RIB4P50861 169 aaPredicted RBP0.49□□□□□ -2.33
SEC8YPR055W SYF2P53277 215 aaPredicted RBP0.49□□□□□ -2.33
SEC8YPR055W YMR166CQ03829 368 aa0.49□□□□□ -2.33
SEC8YPR055W YOL019WQ08157 551 aa0.49□□□□□ -2.33
SEC8YPR055W PGC1Q08959 321 aa0.49□□□□□ -2.33
SEC8YPR055W DCP1Q12517 231 aaPredicted RBP0.49□□□□□ -2.33
SEC8YPR055W GEA2P39993 1459 aaKnown RBP0.49□□□□□ -2.33
SEC8YPR055W RAD7P06779 565 aa0.49□□□□□ -2.33
SEC8YPR055W CAR2P07991 424 aaKnown RBP0.49□□□□□ -2.33
SEC8YPR055W AIM29P36154 155 aa0.49□□□□□ -2.33
SEC8YPR055W TDA11P38854 504 aa0.49□□□□□ -2.33
SEC8YPR055W SCC4P40090 624 aa0.49□□□□□ -2.33
SEC8YPR055W UTP25P40498 721 aaKnown RBP0.49□□□□□ -2.33
SEC8YPR055W OKP1P53298 406 aa0.49□□□□□ -2.33
SEC8YPR055W DBP6P53734 629 aaKnown RBP0.49□□□□□ -2.33
SEC8YPR055W YLR297WQ05899 129 aa0.49□□□□□ -2.33
SEC8YPR055W PEX30Q06169 523 aa0.49□□□□□ -2.33
SEC8YPR055W MYO4P32492 1471 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms