RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W RPL5P26321 297 aaKnown RBP2.09□□□□□ -2.08
VPS38YLR360W YKL063CP35725 167 aa2.09□□□□□ -2.08
VPS38YLR360W MED6P38782 295 aa2.09□□□□□ -2.08
VPS38YLR360W POP2P39008 433 aa2.09□□□□□ -2.08
VPS38YLR360W AVT6P40074 448 aa2.09□□□□□ -2.08
VPS38YLR360W BIO4P53630 237 aa2.09□□□□□ -2.08
VPS38YLR360W RGM1Q00453 211 aa2.09□□□□□ -2.08
VPS38YLR360W SIA1Q12212 622 aa2.09□□□□□ -2.08
VPS38YLR360W PRR2Q12310 699 aa2.09□□□□□ -2.08
VPS38YLR360W MON2P48563 1636 aaPredicted RBP2.08□□□□□ -2.08
VPS38YLR360W SAR1P20606 190 aaKnown RBP2.08□□□□□ -2.08
VPS38YLR360W MBA1P38300 278 aa2.08□□□□□ -2.08
VPS38YLR360W YDR089WP38966 869 aa2.08□□□□□ -2.08
VPS38YLR360W SYF2P53277 215 aaPredicted RBP2.08□□□□□ -2.08
VPS38YLR360W ASR1Q06834 288 aa2.08□□□□□ -2.08
VPS38YLR360W REX3Q12090 404 aa2.08□□□□□ -2.08
VPS38YLR360W INO80P53115 1489 aa2.07□□□□□ -2.08
VPS38YLR360W GCD2P12754 651 aaPredicted RBP2.07□□□□□ -2.08
VPS38YLR360W SEN34P39707 275 aa2.07□□□□□ -2.08
VPS38YLR360W AVT7P40501 490 aa2.07□□□□□ -2.08
VPS38YLR360W LOH1P47055 219 aa2.07□□□□□ -2.08
VPS38YLR360W SWT21P53873 357 aaPredicted RBP2.07□□□□□ -2.08
VPS38YLR360W DPP1Q05521 289 aa2.07□□□□□ -2.08
VPS38YLR360W CUR1Q06469 252 aa2.07□□□□□ -2.08
VPS38YLR360W VAC14Q06708 880 aa2.07□□□□□ -2.08
VPS38YLR360W YDL144CQ07589 356 aa2.07□□□□□ -2.08
VPS38YLR360W SNF6P18888 332 aa2.06□□□□□ -2.08
VPS38YLR360W RPS0AP32905 252 aaKnown RBP2.06□□□□□ -2.08
VPS38YLR360W SPT4P32914 102 aaPredicted RBP2.06□□□□□ -2.08
VPS38YLR360W TRM7P38238 310 aaKnown RBP2.06□□□□□ -2.08
VPS38YLR360W MNN9P39107 395 aaKnown RBP2.06□□□□□ -2.08
VPS38YLR360W TPN1P53099 579 aa2.06□□□□□ -2.08
VPS38YLR360W YNL095CP53932 642 aa2.06□□□□□ -2.08
VPS38YLR360W YMR209CQ03648 457 aa2.06□□□□□ -2.08
VPS38YLR360W TFS1P14306 219 aa2.05□□□□□ -2.08
VPS38YLR360W OSM1P21375 501 aaKnown RBP2.05□□□□□ -2.08
VPS38YLR360W KRR1P25586 316 aaPredicted RBP2.05□□□□□ -2.08
VPS38YLR360W AEP1P32493 518 aa2.05□□□□□ -2.08
VPS38YLR360W COT1P32798 439 aa2.05□□□□□ -2.08
VPS38YLR360W RPC37P36121 282 aa2.05□□□□□ -2.08
VPS38YLR360W TDA11P38854 504 aa2.05□□□□□ -2.08
VPS38YLR360W YIA6P40556 373 aa2.05□□□□□ -2.08
VPS38YLR360W CDC40P40968 455 aaPredicted RBP2.05□□□□□ -2.08
VPS38YLR360W YPT32P51996 222 aaKnown RBP2.05□□□□□ -2.08
VPS38YLR360W COG7P53195 279 aa2.05□□□□□ -2.08
VPS38YLR360W YPL077CQ02831 240 aa2.05□□□□□ -2.08
VPS38YLR360W TVP15Q03860 143 aa2.05□□□□□ -2.08
VPS38YLR360W RRG8Q06109 277 aa2.05□□□□□ -2.08
VPS38YLR360W YLL007CQ07799 665 aa2.05□□□□□ -2.08
VPS38YLR360W YPL150WQ12152 901 aa2.05□□□□□ -2.08
VPS38YLR360W POM33Q12164 279 aa2.05□□□□□ -2.08
VPS38YLR360W MDY2Q12285 212 aa2.05□□□□□ -2.08
VPS38YLR360W ATG5Q12380 294 aa2.05□□□□□ -2.08
VPS38YLR360W CSM1P25651 190 aa2.04□□□□□ -2.08
VPS38YLR360W RPC25P35718 212 aa2.04□□□□□ -2.08
VPS38YLR360W PHO89P38361 574 aa2.04□□□□□ -2.08
VPS38YLR360W RPE1P46969 238 aa2.04□□□□□ -2.08
VPS38YLR360W PIR5P46999 287 aa2.04□□□□□ -2.08
VPS38YLR360W YOR114WQ12219 294 aa2.04□□□□□ -2.08
VPS38YLR360W PAN1P32521 1480 aa2.04□□□□□ -2.08
VPS38YLR360W PEP1P32319 1579 aa2.03□□□□□ -2.08
VPS38YLR360W HIS3P06633 220 aa2.03□□□□□ -2.08
VPS38YLR360W GPI12P23797 304 aa2.03□□□□□ -2.08
VPS38YLR360W RRT12P25381 491 aa2.03□□□□□ -2.08
VPS38YLR360W SPL2P38839 148 aa2.03□□□□□ -2.08
VPS38YLR360W MPP10P47083 593 aaKnown RBP2.03□□□□□ -2.08
VPS38YLR360W GTO1P48239 356 aa2.03□□□□□ -2.08
VPS38YLR360W KEL2P50090 882 aa2.03□□□□□ -2.08
VPS38YLR360W SSU72P53538 206 aaPredicted RBP2.03□□□□□ -2.08
VPS38YLR360W GRX3Q03835 250 aa2.03□□□□□ -2.08
VPS38YLR360W RDS3Q06835 107 aaPredicted RBP2.03□□□□□ -2.08
VPS38YLR360W STH1P32597 1359 aa2.03□□□□□ -2.09
VPS38YLR360W NUP157P40064 1391 aaKnown RBP2.03□□□□□ -2.09
VPS38YLR360W UFD4P33202 1483 aa2.02□□□□□ -2.09
VPS38YLR360W GAL7P08431 366 aa2.02□□□□□ -2.09
VPS38YLR360W KRE6P32486 720 aa2.02□□□□□ -2.09
VPS38YLR360W POP8P38208 133 aa2.02□□□□□ -2.09
VPS38YLR360W ATG12P38316 186 aa2.02□□□□□ -2.09
VPS38YLR360W PCL7P40186 285 aa2.02□□□□□ -2.09
VPS38YLR360W AGP3P43548 558 aa2.02□□□□□ -2.09
VPS38YLR360W TLG1Q03322 224 aa2.02□□□□□ -2.09
VPS38YLR360W YML018CQ03730 393 aa2.02□□□□□ -2.09
VPS38YLR360W TY1B-DR4Q07793 1604 aa2.02□□□□□ -2.09
VPS38YLR360W SSN2P38931 1420 aa2.01□□□□□ -2.09
VPS38YLR360W MYO4P32492 1471 aa2.01□□□□□ -2.09
VPS38YLR360W QCR6P00127 147 aa2.01□□□□□ -2.09
VPS38YLR360W ATP6P00854 259 aa2.01□□□□□ -2.09
VPS38YLR360W ZWF1P11412 505 aaKnown RBP2.01□□□□□ -2.09
VPS38YLR360W SUA5P32579 426 aa2.01□□□□□ -2.09
VPS38YLR360W CAT2P32796 670 aaKnown RBP2.01□□□□□ -2.09
VPS38YLR360W HIS2P38635 335 aa2.01□□□□□ -2.09
VPS38YLR360W SUR2P38992 349 aa2.01□□□□□ -2.09
VPS38YLR360W SHQ1P40486 507 aaPredicted RBP2.01□□□□□ -2.09
VPS38YLR360W GPN3Q06543 272 aa2.01□□□□□ -2.09
VPS38YLR360W ECM5Q03214 1411 aa2.01□□□□□ -2.09
VPS38YLR360W PDR10P51533 1564 aa2□□□□□ -2.09
VPS38YLR360W ILV1P00927 576 aaKnown RBP2□□□□□ -2.09
VPS38YLR360W DSK2P48510 373 aa2□□□□□ -2.09
VPS38YLR360W TAF9Q05027 157 aa2□□□□□ -2.09
VPS38YLR360W BER1Q06688 274 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms