RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W RNQ1P25367 405 aa2.29□□□□□ -2.04
TRA1YHR099W LSB5P25369 354 aa2.29□□□□□ -2.04
TRA1YHR099W YUR1P26725 428 aa2.29□□□□□ -2.04
TRA1YHR099W URK1P27515 501 aa2.29□□□□□ -2.04
TRA1YHR099W TIP1P27654 210 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W DCG1P32460 244 aa2.29□□□□□ -2.04
TRA1YHR099W MUD2P36084 527 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W RPL14AP36105 138 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W RPL14BP38754 138 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W BTT1P40314 149 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W GLR1P41921 483 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W YJR015WP47090 510 aa2.29□□□□□ -2.04
TRA1YHR099W NAT4Q04751 285 aa2.29□□□□□ -2.04
TRA1YHR099W ARR2Q06597 130 aa2.29□□□□□ -2.04
TRA1YHR099W YRA1Q12159 226 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W RPS21BQ3E754 87 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W GAL10P04397 699 aa2.29□□□□□ -2.04
TRA1YHR099W RPS22AP0C0W1 130 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W REV1P12689 985 aa2.29□□□□□ -2.04
TRA1YHR099W DAL82P21705 255 aa2.29□□□□□ -2.04
TRA1YHR099W SRM1P21827 482 aa2.29□□□□□ -2.04
TRA1YHR099W STE13P33894 931 aa2.29□□□□□ -2.04
TRA1YHR099W YFL064CP43540 174 aa2.29□□□□□ -2.04
TRA1YHR099W DPB11P47027 764 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W MSE1P48525 536 aa2.29□□□□□ -2.04
TRA1YHR099W UBC9P50623 157 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W PDR17P53844 350 aa2.29□□□□□ -2.04
TRA1YHR099W ATX2Q12067 313 aa2.29□□□□□ -2.04
TRA1YHR099W RPS17AP02407 136 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W BI2P03873 423 aa2.29□□□□□ -2.04
TRA1YHR099W RPS17BP14127 136 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W ARO3P14843 370 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W YCR102CP25608 368 aa2.29□□□□□ -2.04
TRA1YHR099W MOB1P40484 314 aa2.29□□□□□ -2.04
TRA1YHR099W RPS10BP46784 105 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W YGR153WP48238 217 aa2.29□□□□□ -2.04
TRA1YHR099W CAF40P53829 373 aa2.29□□□□□ -2.04
TRA1YHR099W YLR040CQ07988 224 aa2.29□□□□□ -2.04
TRA1YHR099W RPS10AQ08745 105 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W DAD1Q12248 94 aa2.29□□□□□ -2.04
TRA1YHR099W RPS21AP0C0V8 87 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W SGV1P23293 657 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W GPX1P36014 167 aa2.29□□□□□ -2.04
TRA1YHR099W YCK3P39962 524 aa2.29□□□□□ -2.04
TRA1YHR099W YER121WP40076 114 aa2.29□□□□□ -2.04
TRA1YHR099W SER33P40510 469 aa2.29□□□□□ -2.04
TRA1YHR099W TED1P40533 473 aa2.29□□□□□ -2.04
TRA1YHR099W BSC6Q08280 497 aa2.29□□□□□ -2.04
TRA1YHR099W RPS22BQ3E7Y3 130 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W OPI3P05375 206 aa2.29□□□□□ -2.04
TRA1YHR099W COQ3P27680 312 aa2.29□□□□□ -2.04
TRA1YHR099W IDH2P28241 369 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W THI4P32318 326 aa2.29□□□□□ -2.04
TRA1YHR099W ECM34P38728 170 aa2.29□□□□□ -2.04
TRA1YHR099W CHS7P38843 316 aa2.29□□□□□ -2.04
TRA1YHR099W BOR1P53838 576 aa2.29□□□□□ -2.04
TRA1YHR099W HXT11P54862 567 aa2.29□□□□□ -2.04
TRA1YHR099W PET117Q02771 107 aa2.29□□□□□ -2.04
TRA1YHR099W SWT1Q12104 458 aa2.29□□□□□ -2.04
TRA1YHR099W CAR1P00812 333 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W YOL163WP0CF20 169 aa2.29□□□□□ -2.04
TRA1YHR099W CBS1P14066 229 aa2.29□□□□□ -2.04
TRA1YHR099W MRPL15P36523 253 aa2.29□□□□□ -2.04
TRA1YHR099W PGD1P40356 397 aa2.29□□□□□ -2.04
TRA1YHR099W MRPL22P53881 309 aa2.29□□□□□ -2.04
TRA1YHR099W MPS1P54199 764 aa2.29□□□□□ -2.04
TRA1YHR099W RNY1Q02933 434 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W ISU1Q03020 165 aa2.29□□□□□ -2.04
TRA1YHR099W COQ11Q05892 277 aa2.29□□□□□ -2.04
TRA1YHR099W YTM1Q12024 460 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W YLL056CQ12177 298 aa2.29□□□□□ -2.04
TRA1YHR099W PNS1Q12412 539 aa2.29□□□□□ -2.04
TRA1YHR099W HTZ1Q12692 134 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W UBA3Q99344 299 aa2.29□□□□□ -2.04
TRA1YHR099W FSH3Q99369 266 aa2.29□□□□□ -2.04
TRA1YHR099W HEM4P06174 275 aa2.29□□□□□ -2.04
TRA1YHR099W RPS25BP0C0T4 108 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W ELO2P25358 347 aa2.29□□□□□ -2.04
TRA1YHR099W YCL068CP25593 260 aa2.29□□□□□ -2.04
TRA1YHR099W PRS4P38063 326 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W ECM21P38167 1117 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W ECM13P38195 257 aa2.29□□□□□ -2.04
TRA1YHR099W YEL020CP39994 560 aa2.29□□□□□ -2.04
TRA1YHR099W TPN1P53099 579 aa2.29□□□□□ -2.04
TRA1YHR099W RAV2Q03956 351 aa2.29□□□□□ -2.04
TRA1YHR099W SPG3Q04398 127 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W BNA5Q05979 453 aa2.29□□□□□ -2.04
TRA1YHR099W YPR114WQ06107 315 aa2.29□□□□□ -2.04
TRA1YHR099W TMS1Q12116 473 aa2.29□□□□□ -2.04
TRA1YHR099W RPS25AQ3E792 108 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W IZH4Q99393 312 aa2.29□□□□□ -2.04
TRA1YHR099W PDE1P22434 369 aa2.29□□□□□ -2.04
TRA1YHR099W SAN1P22470 610 aa2.29□□□□□ -2.04
TRA1YHR099W BUB3P26449 341 aa2.29□□□□□ -2.04
TRA1YHR099W IXR1P33417 597 aa2.29□□□□□ -2.04
TRA1YHR099W GPG1P53130 126 aa2.29□□□□□ -2.04
TRA1YHR099W MKC7P53379 596 aa2.29□□□□□ -2.04
TRA1YHR099W PML1Q07930 204 aaPredicted RBP2.29□□□□□ -2.04
TRA1YHR099W RPS8AP0CX39 200 aaKnown RBP2.29□□□□□ -2.04
TRA1YHR099W RPS8BP0CX40 200 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms