RNA–Protein interactions for RNA: YFR009W

GCN20, Transcript of Positive regulator of the Gcn2p kinase activity, yeastyeast

Gene GCN20, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCN20YFR009W ATP16Q12165 160 aa4.38□□□□□ -1.71
GCN20YFR009W YGL194C-AQ2V2P6 80 aa4.38□□□□□ -1.71
GCN20YFR009W MATALPHA1P0CY06 175 aa4.38□□□□□ -1.71
GCN20YFR009W HMLALPHA1P0CY07 175 aa4.38□□□□□ -1.71
GCN20YFR009W YCR061WP25639 631 aa4.38□□□□□ -1.71
GCN20YFR009W NAB2P32505 525 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
GCN20YFR009W SRX1P36077 127 aa4.38□□□□□ -1.71
GCN20YFR009W FLO10P36170 1169 aa4.38□□□□□ -1.71
GCN20YFR009W YBR238CP38330 731 aaKnown RBP4.38□□□□□ -1.71
GCN20YFR009W COS8P38723 381 aa4.38□□□□□ -1.71
GCN20YFR009W RRD1P40454 393 aaKnown RBP4.38□□□□□ -1.71
GCN20YFR009W YIL067CP40514 678 aa4.38□□□□□ -1.71
GCN20YFR009W GNP1P48813 663 aa4.38□□□□□ -1.71
GCN20YFR009W MRPL1Q04599 285 aa4.38□□□□□ -1.71
GCN20YFR009W YPR174CQ06616 221 aaPredicted RBP4.38□□□□□ -1.71
GCN20YFR009W NPC2Q12408 173 aa4.38□□□□□ -1.71
GCN20YFR009W RPP1AP05318 106 aaPredicted RBP4.37□□□□□ -1.71
GCN20YFR009W STE50P25344 346 aa4.37□□□□□ -1.71
GCN20YFR009W SPT10P35208 640 aa4.37□□□□□ -1.71
GCN20YFR009W MRPL16P38064 232 aa4.37□□□□□ -1.71
GCN20YFR009W OCA5P38738 679 aa4.37□□□□□ -1.71
GCN20YFR009W PAC1P39946 494 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W BMT5P40493 336 aa4.37□□□□□ -1.71
GCN20YFR009W VNX1P42839 908 aa4.37□□□□□ -1.71
GCN20YFR009W LYS20P48570 428 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W PHB2P50085 310 aa4.37□□□□□ -1.71
GCN20YFR009W MNN10P50108 393 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W GTF1P53260 183 aaPredicted RBP4.37□□□□□ -1.71
GCN20YFR009W RSM27P53305 110 aa4.37□□□□□ -1.71
GCN20YFR009W NMA1Q06178 401 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W YLR031WQ07978 186 aa4.37□□□□□ -1.71
GCN20YFR009W ENB1Q08299 606 aa4.37□□□□□ -1.71
GCN20YFR009W MCP1Q12106 302 aa4.37□□□□□ -1.71
GCN20YFR009W TMS1Q12116 473 aa4.37□□□□□ -1.71
GCN20YFR009W LYS21Q12122 440 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W TDH2P00358 332 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W RPL20AP0CX23 172 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W RPL20BP0CX24 172 aaPredicted RBP4.37□□□□□ -1.71
GCN20YFR009W GAS1P22146 559 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W DCG1P32460 244 aa4.37□□□□□ -1.71
GCN20YFR009W ECM25P32525 599 aa4.37□□□□□ -1.71
GCN20YFR009W PAD1P33751 242 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
GCN20YFR009W CBT1P36038 271 aaPredicted RBP4.37□□□□□ -1.71
GCN20YFR009W NSG1P38837 291 aa4.37□□□□□ -1.71
GCN20YFR009W ARO9P38840 513 aaPredicted RBP4.37□□□□□ -1.71
GCN20YFR009W PZF1P39933 429 aa4.37□□□□□ -1.71
GCN20YFR009W HAM1P47119 197 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
GCN20YFR009W CTF19Q02732 369 aa4.37□□□□□ -1.71
GCN20YFR009W YDR249CQ03787 373 aa4.37□□□□□ -1.71
GCN20YFR009W MRX8Q05473 314 aa4.37□□□□□ -1.71
GCN20YFR009W YLR030WQ07967 263 aa4.37□□□□□ -1.71
GCN20YFR009W RLM1Q12224 676 aa4.37□□□□□ -1.71
GCN20YFR009W MEX67Q99257 599 aaKnown RBP4.37□□□□□ -1.71
GCN20YFR009W CCH1P50077 2039 aa4.36□□□□□ -1.71
GCN20YFR009W REP2P03872 296 aa4.36□□□□□ -1.71
GCN20YFR009W FUS3P16892 353 aaKnown RBP4.36□□□□□ -1.71
GCN20YFR009W GPI12P23797 304 aa4.36□□□□□ -1.71
GCN20YFR009W PDC2P32896 925 aa4.36□□□□□ -1.71
GCN20YFR009W SRP102P36057 244 aaPredicted RBP4.36□□□□□ -1.71
GCN20YFR009W MRPL36P36531 177 aa4.36□□□□□ -1.71
GCN20YFR009W OSH7P38755 437 aa4.36□□□□□ -1.71
GCN20YFR009W VPS52P39904 641 aa4.36□□□□□ -1.71
GCN20YFR009W AVT7P40501 490 aa4.36□□□□□ -1.71
GCN20YFR009W SCW4P53334 386 aaKnown RBP4.36□□□□□ -1.71
GCN20YFR009W YLR152CP54072 576 aa4.36□□□□□ -1.71
GCN20YFR009W SMX3P54999 86 aaPredicted RBP4.36□□□□□ -1.71
GCN20YFR009W APM1Q00776 475 aaPredicted RBP4.36□□□□□ -1.71
GCN20YFR009W SNP1Q00916 300 aaPredicted RBP4.36□□□□□ -1.71
GCN20YFR009W ARG5,6Q01217 863 aa4.36□□□□□ -1.71
GCN20YFR009W ANT1Q06497 328 aa4.36□□□□□ -1.71
GCN20YFR009W HRT1Q08273 121 aa4.36□□□□□ -1.71
GCN20YFR009W YLR108CQ12259 485 aa4.36□□□□□ -1.71
GCN20YFR009W AAC1P04710 309 aa4.35□□□□□ -1.71
GCN20YFR009W PHO2P07269 559 aa4.35□□□□□ -1.71
GCN20YFR009W YPC1P38298 316 aa4.35□□□□□ -1.71
GCN20YFR009W WSC4P38739 605 aa4.35□□□□□ -1.71
GCN20YFR009W GLR1P41921 483 aaKnown RBP4.35□□□□□ -1.71
GCN20YFR009W YJR141WP47172 347 aaPredicted RBP4.35□□□□□ -1.71
GCN20YFR009W YGR042WP53227 271 aa4.35□□□□□ -1.71
GCN20YFR009W FMP48P53233 369 aa4.35□□□□□ -1.71
GCN20YFR009W SLI1P53304 468 aa4.35□□□□□ -1.71
GCN20YFR009W RHO5P53879 331 aaKnown RBP4.35□□□□□ -1.71
GCN20YFR009W NRK1P53915 240 aa4.35□□□□□ -1.71
GCN20YFR009W YLR460CP54007 376 aa4.35□□□□□ -1.71
GCN20YFR009W YLR352WQ06479 807 aa4.35□□□□□ -1.71
GCN20YFR009W RDR1Q08904 546 aa4.35□□□□□ -1.71
GCN20YFR009W REX3Q12090 404 aa4.35□□□□□ -1.71
GCN20YFR009W ORT1Q12375 292 aa4.35□□□□□ -1.71
GCN20YFR009W PRB1P09232 635 aa4.35□□□□□ -1.71
GCN20YFR009W YSF3P0C074 85 aaPredicted RBP4.35□□□□□ -1.71
GCN20YFR009W CPR4P25334 318 aa4.35□□□□□ -1.71
GCN20YFR009W DBF20P32328 564 aa4.35□□□□□ -1.71
GCN20YFR009W SUA5P32579 426 aa4.35□□□□□ -1.71
GCN20YFR009W MRPL27P36526 146 aaPredicted RBP4.35□□□□□ -1.71
GCN20YFR009W MTC4P38335 694 aaKnown RBP4.35□□□□□ -1.71
GCN20YFR009W BFR1P38934 470 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71 RIP-Chip
GCN20YFR009W UTP25P40498 721 aaKnown RBP4.35□□□□□ -1.71
GCN20YFR009W CIS3P47001 227 aa4.35□□□□□ -1.71
GCN20YFR009W GPI14P47088 403 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 105.7 ms