RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W SAF1P38352 637 aa3.05□□□□□ -1.92
SIZ1YDR409W NSG1P38837 291 aa3.05□□□□□ -1.92
SIZ1YDR409W HRB1P38922 454 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SIZ1YDR409W YMR144WP40214 342 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W PAN6P40459 309 aa3.05□□□□□ -1.92
SIZ1YDR409W YIL024CP40543 189 aa3.05□□□□□ -1.92
SIZ1YDR409W LSM8P47093 109 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W YIP5P53108 310 aa3.05□□□□□ -1.92
SIZ1YDR409W TDA1Q03533 586 aa3.05□□□□□ -1.92
SIZ1YDR409W NAT4Q04751 285 aa3.05□□□□□ -1.92
SIZ1YDR409W MRI1Q06489 411 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W YLR040CQ07988 224 aa3.05□□□□□ -1.92
SIZ1YDR409W INP53Q12271 1107 aa3.05□□□□□ -1.92
SIZ1YDR409W MHT1Q12525 324 aa3.05□□□□□ -1.92
SIZ1YDR409W YPR096CO13587 100 aa3.05□□□□□ -1.92
SIZ1YDR409W ADH2P00331 348 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W MES1P00958 751 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W SEC17P32602 292 aa3.05□□□□□ -1.92
SIZ1YDR409W RAD23P32628 398 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W TOA2P32774 122 aa3.05□□□□□ -1.92
SIZ1YDR409W YBL010CP32788 280 aa3.05□□□□□ -1.92
SIZ1YDR409W BAP3P41815 604 aa3.05□□□□□ -1.92
SIZ1YDR409W TAX4P47030 604 aa3.05□□□□□ -1.92
SIZ1YDR409W ROG1P53118 685 aa3.05□□□□□ -1.92
SIZ1YDR409W CGR1P53188 120 aa3.05□□□□□ -1.92
SIZ1YDR409W YGR026WP53217 278 aa3.05□□□□□ -1.92
SIZ1YDR409W MPP6P53725 186 aaPredicted RBP3.05□□□□□ -1.92
SIZ1YDR409W ATG21Q02887 496 aa3.05□□□□□ -1.92
SIZ1YDR409W CAB5Q03941 241 aa3.05□□□□□ -1.92
SIZ1YDR409W VPS74Q06385 345 aa3.05□□□□□ -1.92
SIZ1YDR409W GPN3Q06543 272 aa3.05□□□□□ -1.92
SIZ1YDR409W BSC6Q08280 497 aa3.05□□□□□ -1.92
SIZ1YDR409W YPR063CQ12160 140 aa3.05□□□□□ -1.92
SIZ1YDR409W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SIZ1YDR409W YLR108CQ12259 485 aa3.05□□□□□ -1.92
SIZ1YDR409W TY1A-NL1Q12391 440 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W MRX4Q12467 430 aa3.05□□□□□ -1.92
SIZ1YDR409W AIR2Q12476 344 aaKnown RBP3.05□□□□□ -1.92
SIZ1YDR409W PEP4P07267 405 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W PRE7P23724 241 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W EHD3P28817 500 aa3.04□□□□□ -1.92
SIZ1YDR409W EMP24P32803 203 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W SRY1P36007 326 aa3.04□□□□□ -1.92
SIZ1YDR409W COS9P36034 407 aa3.04□□□□□ -1.92
SIZ1YDR409W YCR087C-AP37263 153 aa3.04□□□□□ -1.92
SIZ1YDR409W YBR063CP38083 404 aa3.04□□□□□ -1.92
SIZ1YDR409W LDB7P38210 180 aa3.04□□□□□ -1.92
SIZ1YDR409W GLR1P41921 483 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W PFS2P42841 465 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W GAT1P43574 510 aa3.04□□□□□ -1.92
SIZ1YDR409W BNA6P43619 295 aa3.04□□□□□ -1.92
SIZ1YDR409W EAF6P47128 113 aa3.04□□□□□ -1.92
SIZ1YDR409W SCS3P53012 380 aa3.04□□□□□ -1.92
SIZ1YDR409W VPS73P53142 486 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W BNA7Q04066 261 aa3.04□□□□□ -1.92
SIZ1YDR409W SPG3Q04398 127 aaPredicted RBP3.04□□□□□ -1.92
SIZ1YDR409W NNT1Q05874 261 aa3.04□□□□□ -1.92
SIZ1YDR409W YFT2Q06676 274 aa3.04□□□□□ -1.92
SIZ1YDR409W CYK3Q07533 885 aa3.04□□□□□ -1.92
SIZ1YDR409W MED4Q12343 284 aa3.04□□□□□ -1.92
SIZ1YDR409W CHO1P08456 276 aa3.04□□□□□ -1.92
SIZ1YDR409W RPS1BP23248 255 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W SLM5P25345 492 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W PDC2P32896 925 aa3.04□□□□□ -1.92
SIZ1YDR409W YKL162CP36052 402 aa3.04□□□□□ -1.92
SIZ1YDR409W SHE3P38272 425 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W PRE3P38624 215 aa3.04□□□□□ -1.92
SIZ1YDR409W LAG1P38703 411 aa3.04□□□□□ -1.92
SIZ1YDR409W COS8P38723 381 aa3.04□□□□□ -1.92
SIZ1YDR409W UBA4P38820 440 aa3.04□□□□□ -1.92
SIZ1YDR409W SEN34P39707 275 aa3.04□□□□□ -1.92
SIZ1YDR409W ALG8P40351 577 aa3.04□□□□□ -1.92
SIZ1YDR409W LAS21P40367 830 aa3.04□□□□□ -1.92
SIZ1YDR409W POP1P41812 875 aa3.04□□□□□ -1.92
SIZ1YDR409W YJL043WP47053 257 aa3.04□□□□□ -1.92
SIZ1YDR409W COS10P52924 374 aa3.04□□□□□ -1.92
SIZ1YDR409W RMD9P53140 646 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W CUZ1P53899 274 aa3.04□□□□□ -1.92
SIZ1YDR409W TPS1Q00764 495 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W ODC1Q03028 310 aa3.04□□□□□ -1.92
SIZ1YDR409W CTK1Q03957 528 aaKnown RBP3.04□□□□□ -1.92
SIZ1YDR409W HOF1Q05080 669 aa3.04□□□□□ -1.92
SIZ1YDR409W SPO77Q06134 477 aa3.04□□□□□ -1.92
SIZ1YDR409W SRO7Q12038 1033 aa3.04□□□□□ -1.92
SIZ1YDR409W POM34Q12445 299 aa3.04□□□□□ -1.92
SIZ1YDR409W ERD2P18414 219 aa3.03□□□□□ -1.92
SIZ1YDR409W RPI1P23250 407 aaKnown RBP3.03□□□□□ -1.92
SIZ1YDR409W LDS1P31379 325 aa3.03□□□□□ -1.92
SIZ1YDR409W TKL2P33315 681 aa3.03□□□□□ -1.92
SIZ1YDR409W SPO23P33757 523 aa3.03□□□□□ -1.92
SIZ1YDR409W NNK1P36003 928 aa3.03□□□□□ -1.92
SIZ1YDR409W VPS51P36116 164 aa3.03□□□□□ -1.92
SIZ1YDR409W BMT2P38278 337 aa3.03□□□□□ -1.92
SIZ1YDR409W PEX7P39108 375 aa3.03□□□□□ -1.92
SIZ1YDR409W YER121WP40076 114 aa3.03□□□□□ -1.92
SIZ1YDR409W SWM2P40342 146 aa3.03□□□□□ -1.92
SIZ1YDR409W RPE1P46969 238 aa3.03□□□□□ -1.92
SIZ1YDR409W YDL186WP48568 277 aa3.03□□□□□ -1.92
SIZ1YDR409W TNA1P53322 534 aa3.03□□□□□ -1.92
SIZ1YDR409W BUD17P53727 317 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms