RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C HIS5P07172 385 aa2.06□□□□□ -2.08
SSD1YDR293C DSF1P0CX08 502 aa2.06□□□□□ -2.08
SSD1YDR293C YNR073CP0CX09 502 aa2.06□□□□□ -2.08
SSD1YDR293C CDC26P14724 124 aa2.06□□□□□ -2.08
SSD1YDR293C MAG1P22134 296 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C RPL24BP24000 155 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C TRR1P29509 319 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C FUN26P31381 517 aa2.06□□□□□ -2.08
SSD1YDR293C SFK1P35735 353 aa2.06□□□□□ -2.08
SSD1YDR293C DTR1P38125 572 aa2.06□□□□□ -2.08
SSD1YDR293C PEX32P38292 413 aa2.06□□□□□ -2.08
SSD1YDR293C VPS52P39904 641 aa2.06□□□□□ -2.08
SSD1YDR293C MSE1P48525 536 aa2.06□□□□□ -2.08
SSD1YDR293C SYF2P53277 215 aaPredicted RBP2.06□□□□□ -2.08
SSD1YDR293C SCW4P53334 386 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C BSC5P53755 489 aa2.06□□□□□ -2.08
SSD1YDR293C ERG13P54839 491 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C ELP6Q04868 273 aa2.06□□□□□ -2.08
SSD1YDR293C PHO92Q06390 306 aa2.06□□□□□ -2.08
SSD1YDR293C YOR283WQ12040 230 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C UPC2Q12151 913 aa2.06□□□□□ -2.08
SSD1YDR293C MDM32Q12171 622 aa2.06□□□□□ -2.08
SSD1YDR293C YLR108CQ12259 485 aa2.06□□□□□ -2.08
SSD1YDR293C ATG31Q12421 196 aa2.06□□□□□ -2.08
SSD1YDR293C YBR085C-AO43137 85 aa2.06□□□□□ -2.08
SSD1YDR293C RPP1AP05318 106 aaPredicted RBP2.06□□□□□ -2.08
SSD1YDR293C CBP6P07253 162 aaPredicted RBP2.06□□□□□ -2.08
SSD1YDR293C YOL162WP0CF19 215 aa2.06□□□□□ -2.08
SSD1YDR293C ARF2P19146 181 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C MAK32P23060 363 aa2.06□□□□□ -2.08
SSD1YDR293C ATP11P32453 318 aa2.06□□□□□ -2.08
SSD1YDR293C MGM101P32787 269 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C ALY1P36117 915 aa2.06□□□□□ -2.08
SSD1YDR293C MNL1P38888 796 aa2.06□□□□□ -2.08
SSD1YDR293C BAT1P38891 393 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C YER010CP40011 234 aa2.06□□□□□ -2.08
SSD1YDR293C ARF3P40994 183 aaRIP-Chip data2.06□□□□□ -2.08not detected
SSD1YDR293C YGR210CP42942 411 aa2.06□□□□□ -2.08
SSD1YDR293C HHO1P53551 258 aa2.06□□□□□ -2.08
SSD1YDR293C VBA1Q04301 562 aa2.06□□□□□ -2.08
SSD1YDR293C TMN2Q04562 672 aa2.06□□□□□ -2.08
SSD1YDR293C GAS2Q06135 555 aa2.06□□□□□ -2.08
SSD1YDR293C YPR147CQ06522 304 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C SKI7Q08491 747 aaPredicted RBP2.06□□□□□ -2.08
SSD1YDR293C SAM4Q08985 325 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C YEL009C-AA0A023PZF2 135 aa2.06□□□□□ -2.08
SSD1YDR293C YCK1P23291 538 aa2.06□□□□□ -2.08
SSD1YDR293C RNA14P25298 677 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C SED4P25365 1065 aa2.06□□□□□ -2.08
SSD1YDR293C TRX3P25372 127 aa2.06□□□□□ -2.08
SSD1YDR293C RHB1P25378 209 aa2.06□□□□□ -2.08
SSD1YDR293C PPQ1P32945 549 aa2.06□□□□□ -2.08
SSD1YDR293C APT2P36973 181 aa2.06□□□□□ -2.08
SSD1YDR293C CHK1P38147 527 aa2.06□□□□□ -2.08
SSD1YDR293C RRP3P38712 501 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C SLZ1P40167 298 aa2.06□□□□□ -2.08
SSD1YDR293C AVT7P40501 490 aa2.06□□□□□ -2.08
SSD1YDR293C YIL077CP40508 320 aa2.06□□□□□ -2.08
SSD1YDR293C TES1P41903 349 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C LSB3P43603 459 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C ALB1P47019 175 aaPredicted RBP2.06□□□□□ -2.08
SSD1YDR293C RMD9P53140 646 aaKnown RBP2.06□□□□□ -2.08
SSD1YDR293C COG7P53195 279 aa2.06□□□□□ -2.08
SSD1YDR293C BUD9P53226 547 aa2.06□□□□□ -2.08
SSD1YDR293C TIM13P53299 105 aa2.06□□□□□ -2.08
SSD1YDR293C OGG1P53397 376 aaPredicted RBP2.06□□□□□ -2.08
SSD1YDR293C YAT1P80235 687 aa2.06□□□□□ -2.08
SSD1YDR293C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SSD1YDR293C KAP120Q02932 1032 aa2.06□□□□□ -2.08
SSD1YDR293C PLB2Q03674 706 aa2.06□□□□□ -2.08
SSD1YDR293C YDR249CQ03787 373 aa2.06□□□□□ -2.08
SSD1YDR293C HLR1Q04429 423 aa2.06□□□□□ -2.08
SSD1YDR293C MCP1Q12106 302 aa2.06□□□□□ -2.08
SSD1YDR293C REP2P03872 296 aa2.05□□□□□ -2.08
SSD1YDR293C FUM1P08417 488 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C PRE2P30656 287 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C GCS1P35197 352 aa2.05□□□□□ -2.08
SSD1YDR293C NNK1P36003 928 aa2.05□□□□□ -2.08
SSD1YDR293C UTP30P36144 274 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C ECM31P38122 312 aa2.05□□□□□ -2.08
SSD1YDR293C SUR2P38992 349 aa2.05□□□□□ -2.08
SSD1YDR293C AIM10P39965 576 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C FMP10P40098 244 aa2.05□□□□□ -2.08
SSD1YDR293C FAU1P40099 211 aa2.05□□□□□ -2.08
SSD1YDR293C CIN1P40987 1014 aa2.05□□□□□ -2.08
SSD1YDR293C CAF40P53829 373 aa2.05□□□□□ -2.08
SSD1YDR293C YLR460CP54007 376 aa2.05□□□□□ -2.08
SSD1YDR293C YDR444WQ04093 687 aa2.05□□□□□ -2.08
SSD1YDR293C NAT4Q04751 285 aa2.05□□□□□ -2.08
SSD1YDR293C PDR8Q06149 701 aa2.05□□□□□ -2.08
SSD1YDR293C YLR173WQ06247 608 aa2.05□□□□□ -2.08
SSD1YDR293C TPO3Q06451 622 aa2.05□□□□□ -2.08
SSD1YDR293C BRX1Q08235 291 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C GRE1Q08969 168 aa2.05□□□□□ -2.08
SSD1YDR293C PST1Q12355 444 aa2.05□□□□□ -2.08
SSD1YDR293C SWM1Q12379 170 aa2.05□□□□□ -2.08
SSD1YDR293C CDC36P06100 191 aaPredicted RBP2.05□□□□□ -2.08
SSD1YDR293C FRS1P15624 595 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C SEC59P20048 519 aa2.05□□□□□ -2.08
SSD1YDR293C SDH3P33421 198 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms