RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C ARO9P38840 513 aaPredicted RBP4.45□□□□□ -1.7
ROT2YBR229C OYE3P41816 400 aaPredicted RBP4.45□□□□□ -1.7
ROT2YBR229C TAD2P47058 250 aa4.45□□□□□ -1.7
ROT2YBR229C OGG1P53397 376 aaPredicted RBP4.45□□□□□ -1.7
ROT2YBR229C YLR352WQ06479 807 aa4.45□□□□□ -1.7
ROT2YBR229C TDH2P00358 332 aaKnown RBP4.45□□□□□ -1.7
ROT2YBR229C PHO2P07269 559 aa4.45□□□□□ -1.7
ROT2YBR229C PRB1P09232 635 aa4.45□□□□□ -1.7
ROT2YBR229C GPI12P23797 304 aa4.45□□□□□ -1.7
ROT2YBR229C SUA5P32579 426 aa4.45□□□□□ -1.7
ROT2YBR229C MRT4P33201 236 aaKnown RBP4.45□□□□□ -1.7
ROT2YBR229C MSN4P33749 630 aa4.45□□□□□ -1.7
ROT2YBR229C PAC1P39946 494 aaKnown RBP4.45□□□□□ -1.7
ROT2YBR229C YIL108WP40483 696 aaKnown RBP4.45□□□□□ -1.7
ROT2YBR229C YIL060WP40519 144 aa4.45□□□□□ -1.7
ROT2YBR229C PHB2P50085 310 aa4.45□□□□□ -1.7
ROT2YBR229C TYW3P53177 273 aa4.45□□□□□ -1.7
ROT2YBR229C RSM27P53305 110 aa4.45□□□□□ -1.7
ROT2YBR229C MPP6P53725 186 aaPredicted RBP4.45□□□□□ -1.7
ROT2YBR229C MATALPHA1P0CY06 175 aa4.44□□□□□ -1.7
ROT2YBR229C HMLALPHA1P0CY07 175 aa4.44□□□□□ -1.7
ROT2YBR229C FUS1P11710 512 aa4.44□□□□□ -1.7
ROT2YBR229C BET2P20133 325 aa4.44□□□□□ -1.7
ROT2YBR229C NUP1P20676 1076 aa4.44□□□□□ -1.7
ROT2YBR229C STE50P25344 346 aa4.44□□□□□ -1.7
ROT2YBR229C COQ2P32378 372 aa4.44□□□□□ -1.7
ROT2YBR229C SPT23P35210 1082 aa4.44□□□□□ -1.7
ROT2YBR229C MRPL36P36531 177 aa4.44□□□□□ -1.7
ROT2YBR229C YPC1P38298 316 aa4.44□□□□□ -1.7
ROT2YBR229C OCA5P38738 679 aa4.44□□□□□ -1.7
ROT2YBR229C LSM12P38828 187 aaKnown RBP4.44□□□□□ -1.7
ROT2YBR229C YGR012WP53206 393 aa4.44□□□□□ -1.7
ROT2YBR229C GIM3P53900 129 aa4.44□□□□□ -1.7
ROT2YBR229C SMX3P54999 86 aaPredicted RBP4.44□□□□□ -1.7
ROT2YBR229C EGD1Q02642 157 aaKnown RBP4.44□□□□□ -1.7
ROT2YBR229C MRPL1Q04599 285 aa4.44□□□□□ -1.7
ROT2YBR229C COQ10Q08058 207 aa4.44□□□□□ -1.7
ROT2YBR229C AVO1Q08236 1176 aa4.44□□□□□ -1.7
ROT2YBR229C CCH1P50077 2039 aa4.44□□□□□ -1.7
ROT2YBR229C TDH1P00360 332 aaKnown RBP4.44□□□□□ -1.7
ROT2YBR229C CYT1P07143 309 aa4.44□□□□□ -1.7
ROT2YBR229C SAC7P17121 654 aa4.44□□□□□ -1.7
ROT2YBR229C SEC22P22214 214 aa4.44□□□□□ -1.7
ROT2YBR229C ECM25P32525 599 aa4.44□□□□□ -1.7
ROT2YBR229C YKL097CP34245 136 aa4.44□□□□□ -1.7
ROT2YBR229C MRPL27P36526 146 aaPredicted RBP4.44□□□□□ -1.7
ROT2YBR229C ECM31P38122 312 aa4.44□□□□□ -1.7
ROT2YBR229C VPS52P39904 641 aa4.44□□□□□ -1.7
ROT2YBR229C RRD1P40454 393 aaKnown RBP4.44□□□□□ -1.7
ROT2YBR229C UTP25P40498 721 aaKnown RBP4.44□□□□□ -1.7
ROT2YBR229C OTU1P43558 301 aa4.44□□□□□ -1.7
ROT2YBR229C YGR042WP53227 271 aa4.44□□□□□ -1.7
ROT2YBR229C CAF40P53829 373 aa4.44□□□□□ -1.7
ROT2YBR229C NCE101Q02820 53 aa4.44□□□□□ -1.7
ROT2YBR229C SPR28Q04921 423 aa4.44□□□□□ -1.7
ROT2YBR229C GRC3Q07845 632 aa4.44□□□□□ -1.7
ROT2YBR229C GUP2Q08929 609 aa4.44□□□□□ -1.7
ROT2YBR229C NPC2Q12408 173 aa4.44□□□□□ -1.7
ROT2YBR229C LDS1P31379 325 aa4.43□□□□□ -1.7
ROT2YBR229C MRP20P32387 263 aa4.43□□□□□ -1.7
ROT2YBR229C SRB6P32570 121 aa4.43□□□□□ -1.7
ROT2YBR229C SLC1P33333 303 aa4.43□□□□□ -1.7
ROT2YBR229C PAD1P33751 242 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
ROT2YBR229C MTC4P38335 694 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C AVT7P40501 490 aa4.43□□□□□ -1.7
ROT2YBR229C MTM1P53320 366 aa4.43□□□□□ -1.7
ROT2YBR229C NRK1P53915 240 aa4.43□□□□□ -1.7
ROT2YBR229C ORT1Q12375 292 aa4.43□□□□□ -1.7
ROT2YBR229C FUR4P05316 633 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C RPL20AP0CX23 172 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C RPL20BP0CX24 172 aaPredicted RBP4.43□□□□□ -1.7
ROT2YBR229C GAS1P22146 559 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C CPR4P25334 318 aa4.43□□□□□ -1.7
ROT2YBR229C NAB2P32505 525 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
ROT2YBR229C PFS1P38872 237 aa4.43□□□□□ -1.7
ROT2YBR229C ELO1P39540 310 aa4.43□□□□□ -1.7
ROT2YBR229C GCV3P39726 170 aaPredicted RBP4.43□□□□□ -1.7
ROT2YBR229C LEM3P42838 414 aa4.43□□□□□ -1.7
ROT2YBR229C GPI14P47088 403 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C ERG13P54839 491 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C ARG5,6Q01217 863 aa4.43□□□□□ -1.7
ROT2YBR229C ODC1Q03028 310 aa4.43□□□□□ -1.7
ROT2YBR229C IPP1P00817 287 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C ERG4P25340 473 aa4.43□□□□□ -1.7
ROT2YBR229C IMG2P25642 146 aaPredicted RBP4.43□□□□□ -1.7
ROT2YBR229C DBF20P32328 564 aa4.43□□□□□ -1.7
ROT2YBR229C YGL159WP53110 370 aa4.43□□□□□ -1.7
ROT2YBR229C SCW4P53334 386 aaKnown RBP4.43□□□□□ -1.7
ROT2YBR229C HHO1P53551 258 aa4.43□□□□□ -1.7
ROT2YBR229C CTF19Q02732 369 aa4.43□□□□□ -1.7
ROT2YBR229C YDR444WQ04093 687 aa4.43□□□□□ -1.7
ROT2YBR229C YPR174CQ06616 221 aaPredicted RBP4.43□□□□□ -1.7
ROT2YBR229C PIB1Q06651 286 aa4.43□□□□□ -1.7
ROT2YBR229C HRT1Q08273 121 aa4.43□□□□□ -1.7
ROT2YBR229C EAF3Q12432 401 aa4.43□□□□□ -1.7
ROT2YBR229C RRI1Q12468 440 aa4.43□□□□□ -1.7
ROT2YBR229C YLR358CO13565 187 aa4.42□□□□□ -1.7
ROT2YBR229C ISC10P32645 267 aa4.42□□□□□ -1.7
ROT2YBR229C SPT10P35208 640 aa4.42□□□□□ -1.7
ROT2YBR229C BAT1P38891 393 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms