RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	DAP2	P18962	818 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	CDC10	P25342	322 aa	Known RBP	4.2	□□□□□ -1.74
PCL1	YNL289W	STP22	P25604	385 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	CAT2	P32796	670 aa	Known RBP	4.2	□□□□□ -1.74
PCL1	YNL289W	MRE11	P32829	692 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	SSO1	P32867	290 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	MRPL17	P36528	281 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
PCL1	YNL289W	YEL057C	P39983	233 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	FAU1	P40099	211 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	YLR413W	Q06689	675 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	UAF30	Q08747	228 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	YPR202W	Q08993	238 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	SKS1	Q12505	502 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	GCN4	P03069	281 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	MSS116	P15424	664 aa	Known RBP	4.19	□□□□□ -1.74
PCL1	YNL289W	LDB16	P25587	256 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	FRE2	P36033	711 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	TRM5	P38793	499 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	MET28	P40573	187 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	YGR250C	P53316	781 aa	Known RBP	4.19	□□□□□ -1.74
PCL1	YNL289W	YDL121C	Q07541	149 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	YLR036C	Q07986	203 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	YOL131W	Q08270	108 aa		4.19	□□□□□ -1.74
PCL1	YNL289W	PHO91	P27514	894 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	NAM9	P27929	486 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	FUN19	P28003	413 aa	Predicted RBP	4.18	□□□□□ -1.74
PCL1	YNL289W	DOA1	P36037	715 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	PRP39	P39682	629 aa	Known RBP	4.18	□□□□□ -1.74
PCL1	YNL289W	RGI1	P40043	161 aa	Predicted RBP	4.18	□□□□□ -1.74
PCL1	YNL289W	LYS12	P40495	371 aa	Known RBP	4.18	□□□□□ -1.74
PCL1	YNL289W	SYG1	P40528	902 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	TPC1	P53257	314 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	RSM10	Q03201	203 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	YDR476C	Q03362	224 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	SMA2	Q04658	369 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	YPR174C	Q06616	221 aa	Predicted RBP	4.18	□□□□□ -1.74
PCL1	YNL289W	GET4	Q12125	312 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	RPN6	Q12377	434 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	YDL007C-A	Q2V2Q0	85 aa		4.18	□□□□□ -1.74
PCL1	YNL289W	STE7	P06784	515 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	GPI12	P23797	304 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	MKK1	P32490	508 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	TOA1	P32773	286 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	LHP1	P33399	275 aa	Known RBP	4.17	□□□□□ -1.74
PCL1	YNL289W	FRT2	P39734	528 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	ICE2	P40499	491 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	YIL001W	P40560	513 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	PHB1	P40961	287 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	ARF3	P40994	183 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
PCL1	YNL289W	GAB1	P41733	394 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	YGR067C	P53243	804 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	MPA43	P53583	542 aa	Predicted RBP	4.17	□□□□□ -1.74
PCL1	YNL289W	TIM10	P87108	93 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	MDM30	Q05930	598 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	ASA1	Q06822	443 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	HSP42	Q12329	375 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	YRM1	Q12340	786 aa		4.17	□□□□□ -1.74
PCL1	YNL289W	PRP46	Q12417	451 aa	Predicted RBP	4.17	□□□□□ -1.74
PCL1	YNL289W	ATP6	P00854	259 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	RPL31B	P0C2H9	113 aa	Known RBP	4.16	□□□□□ -1.74
PCL1	YNL289W	CPR1	P14832	162 aa	Known RBP	4.16	□□□□□ -1.74
PCL1	YNL289W	RVS161	P25343	265 aa	Known RBP	4.16	□□□□□ -1.74
PCL1	YNL289W	PMT2	P31382	759 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	SWH1	P35845	1188 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	FES1	P38260	290 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	YHR177W	P38867	453 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	FAD1	P38913	306 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	CUP9	P41817	306 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	AVT4	P50944	713 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	OCA1	P50946	238 aa	Predicted RBP	4.16	□□□□□ -1.74
PCL1	YNL289W	HSP31	Q04432	237 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	DYN3	Q04949	312 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	DCI1	Q08558	271 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	RAX1	Q08760	435 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	AKR2	Q12013	749 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	TPO4	Q12256	659 aa		4.16	□□□□□ -1.74
PCL1	YNL289W	YSF3	P0C074	85 aa	Predicted RBP	4.15	□□□□□ -1.75
PCL1	YNL289W	HOM3	P10869	527 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	YIM1	P28625	365 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	IST2	P38250	946 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	TRR2	P38816	342 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	FAA2	P39518	744 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	MTW1	P39731	289 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	JEM1	P40358	645 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	MAM33	P40513	266 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	YJR141W	P47172	347 aa	Predicted RBP	4.15	□□□□□ -1.75
PCL1	YNL289W	SYF2	P53277	215 aa	Predicted RBP	4.15	□□□□□ -1.75
PCL1	YNL289W	INP1	Q03694	420 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	YDR239C	Q03780	787 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	YMR310C	Q04867	317 aa	Predicted RBP	4.15	□□□□□ -1.75
PCL1	YNL289W	SEI1	Q06058	285 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	GMC2	Q06201	188 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	ARR1	Q06596	294 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	SNX3	Q08826	162 aa	Known RBP	4.15	□□□□□ -1.75
PCL1	YNL289W	YOR376W	Q08900	122 aa		4.15	□□□□□ -1.75
PCL1	YNL289W	THP2	O13539	261 aa	Known RBP	4.14	□□□□□ -1.75
PCL1	YNL289W	NOP1	P15646	327 aa	Known RBP	4.14	□□□□□ -1.75
PCL1	YNL289W	UGA1	P17649	471 aa		4.14	□□□□□ -1.75
PCL1	YNL289W	RPB5	P20434	215 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms