RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeast

Gene SEC13, Length 894 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC13	YLR208W	RPL18A	P0CX49	186 aa	Known RBP	4.89	□□□□□ -1.63
SEC13	YLR208W	RPL18B	P0CX50	186 aa	Known RBP	4.89	□□□□□ -1.63
SEC13	YLR208W	SNF6	P18888	332 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	FAR1	P21268	830 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	PTC6	P25646	442 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	CSM1	P25651	190 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	RPS5	P26783	225 aa	Known RBP	4.89	□□□□□ -1.63
SEC13	YLR208W	CDC5	P32562	705 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	SDH3	P33421	198 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	SOF1	P33750	489 aa	Known RBP	4.89	□□□□□ -1.63
SEC13	YLR208W	AST1	P35183	429 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	SPT10	P35208	640 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	GET2	P40056	285 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	TFG2	P41896	400 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC13	YLR208W	SLI1	P53304	468 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	RNT1	Q02555	471 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	IZH1	Q03419	316 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	PLB2	Q03674	706 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	KRE28	Q04431	385 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	YPR174C	Q06616	221 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC13	YLR208W	PRP46	Q12417	451 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC13	YLR208W	RPP2A	P05319	106 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	RAD1	P06777	1100 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	RHO1	P06780	209 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	GDH1	P07262	454 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	YLL053C	P0CD98	152 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	SSC1	P0CS90	654 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	RPS16A	P0CX51	143 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	RPS16B	P0CX52	143 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	CBF1	P17106	351 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	GPI12	P23797	304 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	COS9	P36034	407 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	OMA1	P36163	345 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	FES1	P38260	290 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	CIN4	P39110	191 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	HAT2	P39984	401 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	SNL1	P40548	159 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	ATG27	P46989	271 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	LSM1	P47017	172 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	TAX4	P47030	604 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	MSY1	P48527	492 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	MKC7	P53379	596 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	EAF7	P53911	425 aa	Known RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	SKI8	Q02793	397 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC13	YLR208W	NRG1	Q03125	231 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	GOT1	Q03554	138 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	BCH1	Q05029	724 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	SPO77	Q06134	477 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	ARO10	Q06408	635 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	YDL109C	Q12103	647 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	YPR1	Q12458	312 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	YOR032W-A	Q8TGS1	66 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	Q0297	Q9ZZV8	51 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	FLO9	P39712	1322 aa		4.88	□□□□□ -1.63
SEC13	YLR208W	NFT1	P0CE68	1218 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	FBA1	P14540	359 aa	Known RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	ERG9	P29704	444 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	URA10	P30402	227 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	VMA6	P32366	345 aa	Known RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	STE14	P32584	239 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	GCG1	P32656	232 aa	Known RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	PRS4	P38063	326 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	RIB1	P38066	345 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	SBE22	P38814	852 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	ARO9	P38840	513 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	FET3	P38993	636 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	PIG2	P40187	538 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	YIL169C	P40442	995 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	NDC80	P40460	691 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	XBP1	P40489	647 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	YDL186W	P48568	277 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	TAF6	P53040	516 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	TEX1	P53851	422 aa	Known RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	GAS3	Q03655	524 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	ARP10	Q04549	284 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	ADH6	Q04894	360 aa	Known RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	GAS2	Q06135	555 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	SNA4	Q07549	140 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	YPR011C	Q12251	326 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	RRP42	Q12277	265 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13	YLR208W	RGS2	Q99188	309 aa		4.87	□□□□□ -1.63
SEC13	YLR208W	THP2	O13539	261 aa	Known RBP	4.86	□□□□□ -1.63
SEC13	YLR208W	SCEI	P03882	235 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	AAC1	P04710	309 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	PRP4	P20053	465 aa	Known RBP	4.86	□□□□□ -1.63
SEC13	YLR208W	SGV1	P23293	657 aa	Known RBP	4.86	□□□□□ -1.63
SEC13	YLR208W	ELO2	P25358	347 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	DEG1	P31115	442 aa	Known RBP	4.86	□□□□□ -1.63
SEC13	YLR208W	OAR1	P35731	278 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	HES1	P35843	434 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	YKR073C	P36153	106 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	RPL32	P38061	130 aa	Known RBP	4.86	□□□□□ -1.63
SEC13	YLR208W	QDR3	P38227	689 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SEC13	YLR208W	BIG1	P38813	335 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	MSS4	P38994	779 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	SOP4	P39543	234 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13	YLR208W	FRT2	P39734	528 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	ECM10	P39987	644 aa		4.86	□□□□□ -1.63
SEC13	YLR208W	AGE2	P40529	298 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms