RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	SED5	Q01590	340 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	MRX9	Q07349	420 aa	Known RBP	1.26	□□□□□ -2.21
SMC4	YLR086W	DNL4	Q08387	944 aa	Predicted RBP	1.26	□□□□□ -2.21
SMC4	YLR086W	HMS1	Q12398	434 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	AHC1	Q12433	566 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	ZRC1	P20107	442 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	MRPL25	P23369	157 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	CDC50	P25656	391 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	RIB7	P33312	244 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	ECT1	P33412	323 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	BMH2	P34730	273 aa	Known RBP	1.26	□□□□□ -2.21
SMC4	YLR086W	GCN20	P43535	752 aa	Known RBP	1.26	□□□□□ -2.21
SMC4	YLR086W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	1.26	□□□□□ -2.21	not detected
SMC4	YLR086W	YLR446W	Q06204	433 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	MHR1	Q06630	226 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	YLR413W	Q06689	675 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	SLF1	Q12034	447 aa	Known RBP	1.26	□□□□□ -2.21
SMC4	YLR086W	ATP16	Q12165	160 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	RUD3	Q12234	484 aa	Known RBP	1.26	□□□□□ -2.21
SMC4	YLR086W	NAG1	Q8TGN9	163 aa		1.26	□□□□□ -2.21
SMC4	YLR086W	IRA2	P19158	3079 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	ADH2	P00331	348 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	RPC40	P07703	335 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	CAR2	P07991	424 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	ITR2	P30606	609 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	UBC6	P33296	250 aa	Predicted RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	BMT2	P38278	337 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	SOP4	P39543	234 aa	Predicted RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	AIM10	P39965	576 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	MOB2	P43563	287 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	YFR018C	P43599	363 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	YPT32	P51996	222 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	UBC13	P52490	153 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	SDS23	P53172	527 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	VPS60	Q03390	229 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	SCW10	Q04951	389 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	PIN3	Q06449	215 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	BER1	Q06688	274 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	TAF10	Q12030	206 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	SPO24	Q3E752	67 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	MYO3	P36006	1272 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	PRE5	P40302	234 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	FMP33	P46998	180 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	AIM23	P47015	356 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	YJR054W	P47114	497 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	TIS11	P47977	285 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.25	□□□□□ -2.21	not detected
SMC4	YLR086W	YLR283W	Q05867	314 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	YPL245W	Q12179	454 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	RBD2	Q12270	262 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	COX2	P00410	251 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	MSF1	P08425	469 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	TCP1	P12612	559 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	CTA1	P15202	515 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	PUT4	P15380	627 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	1.25	□□□□□ -2.21	not detected
SMC4	YLR086W	BMH1	P29311	267 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	SRB4	P32569	687 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	HIS2	P38635	335 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	NDT80	P38830	627 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	WWM1	P43582	211 aa	Known RBP	1.25	□□□□□ -2.21
SMC4	YLR086W	NCA3	P46955	337 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	CRH1	P53301	507 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	SMP3	Q04174	516 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	VTI1	Q04338	217 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	APC9	Q12107	265 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	SNF8	Q12483	233 aa		1.25	□□□□□ -2.21
SMC4	YLR086W	RPL24A	P04449	155 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	RVS161	P25343	265 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	AEP1	P32493	518 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	PPQ1	P32945	549 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	END3	P39013	349 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	MAL13	P53338	473 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	YDR018C	Q12185	396 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	GLE1	Q12315	538 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	YOL085C	Q99345	113 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	SWI1	P09547	1314 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	URB1	P34241	1764 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	MDM35	O60200	86 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	YEL045C	P32616	141 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	RAD23	P32628	398 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	CYM1	P32898	989 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	COY1	P34237	679 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	PRM9	P39551	298 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	RRG9	P40156	214 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	SHQ1	P40486	507 aa	Predicted RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	DFG10	P40526	253 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	EGT2	P42835	1041 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	AGP3	P43548	558 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	BIR1	P47134	954 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	MND1	P53102	219 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	TPS1	Q00764	495 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	SLT2	Q00772	484 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	IRC4	Q03036	179 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	GMC2	Q06201	188 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	GPN3	Q06543	272 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	DDC1	Q08949	612 aa		1.24	□□□□□ -2.21
SMC4	YLR086W	PFK27	Q12471	397 aa	Predicted RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	RPL31A	P0C2H8	113 aa	Known RBP	1.24	□□□□□ -2.21
SMC4	YLR086W	RSR1	P13856	272 aa		1.24	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms