RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	RPS5	P26783	225 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	UBC6	P33296	250 aa	Predicted RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	YKL063C	P35725	167 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	SWC5	P38326	303 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	TVP23	P38962	199 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	YAR068W	P39564	161 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	NPT1	P39683	429 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	YGL039W	P53183	348 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	CRH1	P53301	507 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	RET3	P53600	189 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	VPS9	P54787	451 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	REX2	P54964	269 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	SCS7	Q03529	384 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	GOT1	Q03554	138 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	VHS1	Q03785	461 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	YPR147C	Q06522	304 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	RUD3	Q12234	484 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	NAG1	Q8TGN9	163 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	MDM35	O60200	86 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	ROX1	P25042	368 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	LSB5	P25369	354 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	PEX3	P28795	441 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SSO1	P32867	290 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SEC66	P33754	206 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	YKR015C	P36111	568 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	DBP7	P36120	742 aa	Known RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	SMC2	P38989	1170 aa	Known RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	AIM10	P39965	576 aa	Known RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	PAN6	P40459	309 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SHE4	P51534	789 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	MNT4	P53745	580 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	IGO1	P53897	168 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	AIM33	Q04516	312 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	GTO3	Q04806	366 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	BOP2	Q06150	570 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SNU66	Q12420	587 aa	Predicted RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	RAD50	P12753	1312 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	RPL43A	P0CX25	92 aa	Known RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	RPL43B	P0CX26	92 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	GCD2	P12754	651 aa	Predicted RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	MRPL20	P22354	195 aa	Predicted RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	CPR2	P23285	205 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	YCL068C	P25593	260 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SUA5	P32579	426 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	UIP5	P36137	443 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	FES1	P38260	290 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	CUE1	P38428	203 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	YHR045W	P38775	560 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	CTM1	P38818	585 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SER3	P40054	469 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	MOB1	P40484	314 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	YIL054W	P40524	105 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	MET28	P40573	187 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	PAC11	P40960	533 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SFH5	P47008	294 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	LCB3	P47013	409 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	TAD2	P47058	250 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	COS5	P47187	383 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	CDH1	P53197	566 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	SWC4	P53201	476 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	COS1	P53822	381 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	BER1	Q06688	274 aa	Known RBP	0.78	□□□□□ -2.28
PRP16	YKR086W	COS7	Q07788	383 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	TOM1	Q03280	3268 aa		0.78	□□□□□ -2.28
PRP16	YKR086W	ADH3	P07246	375 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	TAL1	P15019	335 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	ARO2	P28777	376 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	INM1	P38710	295 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YHL026C	P38740	315 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	SRP14	P38985	146 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	SEO1	P39709	593 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	VTC1	P40046	129 aa	RIP-Chip data	0.77	□□□□□ -2.29	not detected
PRP16	YKR086W	YJL118W	P47022	219 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	CPR7	P47103	393 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	ERV29	P53337	310 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
PRP16	YKR086W	YPL080C	Q02826	108 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	RQC1	Q05468	723 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	ASR1	Q06834	288 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YFH1	Q07540	174 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	SGT1	Q08446	395 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	WTM1	Q12363	437 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	RMD5	Q12508	421 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	UBA3	Q99344	299 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	SUP35	P05453	685 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	BCY1	P07278	416 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	YKR104W	P0CE69	306 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	MET16	P18408	261 aa	Predicted RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	EXG1	P23776	448 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	NFU1	P32860	256 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	RIB7	P33312	244 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	EBP2	P36049	427 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	GPI18	P38211	433 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	MST28	P39552	234 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	HMF1	P40037	129 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	YIL001W	P40560	513 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YIR035C	P40579	254 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	FMP32	P43557	207 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	IGD1	P43598	195 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	TIM13	P53299	105 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 77.2 ms