RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C LSO1Q3E827 93 aa10.24□□□□□ -0.77
YKR040CYKR040C URE2P23202 354 aaKnown RBP10.23□□□□□ -0.77
YKR040CYKR040C CPR2P23285 205 aa10.23□□□□□ -0.77
YKR040CYKR040C SSE2P32590 693 aaKnown RBP10.23□□□□□ -0.77
YKR040CYKR040C MTR2P34232 184 aaKnown RBP10.23□□□□□ -0.77
YKR040CYKR040C AVT7P40501 490 aa10.23□□□□□ -0.77
YKR040CYKR040C YFL051CP43552 160 aa10.23□□□□□ -0.77
YKR040CYKR040C MOB2P43563 287 aa10.23□□□□□ -0.77
YKR040CYKR040C RET2P43621 546 aa10.23□□□□□ -0.77
YKR040CYKR040C SFH5P47008 294 aa10.23□□□□□ -0.77
YKR040CYKR040C ACS1Q01574 713 aa10.23□□□□□ -0.77
YKR040CYKR040C RCE1Q03530 315 aa10.23□□□□□ -0.77
YKR040CYKR040C HAS1Q03532 505 aaKnown RBP10.23□□□□□ -0.77
YKR040CYKR040C MRPL51Q06090 140 aaPredicted RBP10.23□□□□□ -0.77
YKR040CYKR040C YLR345WQ06137 509 aa10.23□□□□□ -0.77
YKR040CYKR040C MRL1Q06815 381 aa10.23□□□□□ -0.77
YKR040CYKR040C YDL114WQ07530 308 aa10.23□□□□□ -0.77
YKR040CYKR040C OPI3P05375 206 aa10.22□□□□□ -0.77
YKR040CYKR040C CNA1P23287 553 aa10.22□□□□□ -0.77
YKR040CYKR040C STE50P25344 346 aa10.22□□□□□ -0.77
YKR040CYKR040C YCL002CP25565 263 aa10.22□□□□□ -0.77
YKR040CYKR040C YCL042WP25572 119 aa10.22□□□□□ -0.77
YKR040CYKR040C PRP21P32524 280 aaPredicted RBP10.22□□□□□ -0.77
YKR040CYKR040C YME2P32843 850 aa10.22□□□□□ -0.77
YKR040CYKR040C MAL32P38158 584 aa10.22□□□□□ -0.77
YKR040CYKR040C AMN1P38285 549 aaPredicted RBP10.22□□□□□ -0.77
YKR040CYKR040C HIS6P40545 261 aa10.22□□□□□ -0.77
YKR040CYKR040C MAL12P53341 584 aa10.22□□□□□ -0.77
YKR040CYKR040C RPL6AQ02326 176 aaKnown RBP10.22□□□□□ -0.77
YKR040CYKR040C API2Q04413 109 aa10.22□□□□□ -0.77
YKR040CYKR040C YLR040CQ07988 224 aa10.22□□□□□ -0.77
YKR040CYKR040C MSW1P04803 379 aa10.21□□□□□ -0.77
YKR040CYKR040C RPL35AP0CX84 120 aaKnown RBP10.21□□□□□ -0.77
YKR040CYKR040C RPL35BP0CX85 120 aaKnown RBP10.21□□□□□ -0.77
YKR040CYKR040C YBR063CP38083 404 aa10.21□□□□□ -0.77
YKR040CYKR040C YBR285WP38354 144 aa10.21□□□□□ -0.77
YKR040CYKR040C SCY1P53009 804 aa10.21□□□□□ -0.77
YKR040CYKR040C NQM1P53228 333 aaPredicted RBP10.21□□□□□ -0.77
YKR040CYKR040C IPK1Q06667 281 aa10.21□□□□□ -0.77
YKR040CYKR040C PCL9Q12477 304 aa10.21□□□□□ -0.77
YKR040CYKR040C SED4P25365 1065 aa10.2□□□□□ -0.78
YKR040CYKR040C ITR1P30605 584 aa10.2□□□□□ -0.78
YKR040CYKR040C PRS3P38689 320 aaKnown RBP10.2□□□□□ -0.78
YKR040CYKR040C IRC5P43610 853 aa10.2□□□□□ -0.78
YKR040CYKR040C BUD17P53727 317 aa10.2□□□□□ -0.78
YKR040CYKR040C NUP49Q02199 472 aa10.2□□□□□ -0.78
YKR040CYKR040C PST2Q12335 198 aaKnown RBP10.2□□□□□ -0.78
YKR040CYKR040C RTN2Q12443 393 aa10.2□□□□□ -0.78
YKR040CYKR040C MRPS5P33759 307 aa10.19□□□□□ -0.78
YKR040CYKR040C SLZ1P40167 298 aa10.19□□□□□ -0.78
YKR040CYKR040C MNT4P53745 580 aa10.19□□□□□ -0.78
YKR040CYKR040C YNL165WP53891 406 aa10.19□□□□□ -0.78
YKR040CYKR040C GRX5Q02784 150 aa10.19□□□□□ -0.78
YKR040CYKR040C YMR315WQ04869 349 aaKnown RBP10.19□□□□□ -0.78
YKR040CYKR040C NNT1Q05874 261 aa10.19□□□□□ -0.78
YKR040CYKR040C RRP9Q06506 573 aaKnown RBP10.19□□□□□ -0.78
YKR040CYKR040C YGR161W-CQ3E744 92 aa10.19□□□□□ -0.78
YKR040CYKR040C KRR1P25586 316 aaPredicted RBP10.18□□□□□ -0.78
YKR040CYKR040C SOP4P39543 234 aaPredicted RBP10.18□□□□□ -0.78
YKR040CYKR040C YER084WP40057 128 aa10.18□□□□□ -0.78
YKR040CYKR040C NIT3P49954 291 aa10.18□□□□□ -0.78
YKR040CYKR040C SIP18P50263 79 aa10.18□□□□□ -0.78
YKR040CYKR040C FIN1Q03898 291 aa10.18□□□□□ -0.78
YKR040CYKR040C YDR387CQ04162 555 aa10.18□□□□□ -0.78
YKR040CYKR040C SYC1Q08553 188 aaPredicted RBP10.18□□□□□ -0.78
YKR040CYKR040C ACF2Q12168 779 aa10.18□□□□□ -0.78
YKR040CYKR040C RAS1P01119 309 aa10.17□□□□□ -0.78
YKR040CYKR040C RPS13P05756 151 aaKnown RBP10.17□□□□□ -0.78
YKR040CYKR040C YBR220CP38318 560 aa10.17□□□□□ -0.78
YKR040CYKR040C YLF2P38746 405 aa10.17□□□□□ -0.78
YKR040CYKR040C EGD2P38879 174 aaKnown RBP10.17□□□□□ -0.78
YKR040CYKR040C SLD3P53135 668 aa10.17□□□□□ -0.78
YKR040CYKR040C MCH4Q08268 501 aa10.17□□□□□ -0.78
YKR040CYKR040C NCE102Q12207 173 aaRIP-Chip data10.17□□□□□ -0.78not detected
YKR040CYKR040C PDA1P16387 420 aaKnown RBP10.16□□□□□ -0.78
YKR040CYKR040C STE18P18852 110 aa10.16□□□□□ -0.78
YKR040CYKR040C IDP1P21954 428 aaKnown RBP10.16□□□□□ -0.78
YKR040CYKR040C FPS1P23900 669 aa10.16□□□□□ -0.78
YKR040CYKR040C SRP102P36057 244 aaPredicted RBP10.16□□□□□ -0.78
YKR040CYKR040C YHR035WP38769 630 aa10.16□□□□□ -0.78
YKR040CYKR040C MDM31P38880 579 aa10.16□□□□□ -0.78
YKR040CYKR040C ECM1P39715 212 aa10.16□□□□□ -0.78
YKR040CYKR040C AIM10P39965 576 aaKnown RBP10.16□□□□□ -0.78
YKR040CYKR040C PFS2P42841 465 aaKnown RBP10.16□□□□□ -0.78
YKR040CYKR040C VOA1P53262 265 aa10.16□□□□□ -0.78
YKR040CYKR040C AIM6Q07716 390 aa10.16□□□□□ -0.78
YKR040CYKR040C IZH2Q12442 317 aa10.16□□□□□ -0.78
YKR040CYKR040C NDC1P32500 655 aa10.15□□□□□ -0.78
YKR040CYKR040C RPC34P32910 317 aa10.15□□□□□ -0.78
YKR040CYKR040C TNA1P53322 534 aa10.15□□□□□ -0.78
YKR040CYKR040C TIM10P87108 93 aa10.15□□□□□ -0.78
YKR040CYKR040C TLG1Q03322 224 aa10.15□□□□□ -0.78
YKR040CYKR040C AIM36Q03798 255 aa10.15□□□□□ -0.78
YKR040CYKR040C TY1A-BLQ12266 440 aa10.15□□□□□ -0.78
YKR040CYKR040C MCT1Q12283 360 aa10.15□□□□□ -0.78
YKR040CYKR040C RRI1Q12468 440 aa10.15□□□□□ -0.78
YKR040CYKR040C KIN28P06242 306 aa10.14□□□□□ -0.79
YKR040CYKR040C FUN19P28003 413 aaPredicted RBP10.14□□□□□ -0.79
YKR040CYKR040C SUR1P33300 382 aa10.14□□□□□ -0.79
YKR040CYKR040C ECM4P36156 370 aa10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms