RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C CAB5Q03941 241 aa3.02□□□□□ -1.93
CDC40YDR364C GMC2Q06201 188 aa3.02□□□□□ -1.93
CDC40YDR364C REX4Q08237 289 aa3.02□□□□□ -1.93
CDC40YDR364C VPS68Q12016 184 aa3.02□□□□□ -1.93
CDC40YDR364C RPN6Q12377 434 aa3.02□□□□□ -1.93
CDC40YDR364C YLR422WQ06409 1932 aa3.02□□□□□ -1.93
CDC40YDR364C IRA2P19158 3079 aa3.02□□□□□ -1.93
CDC40YDR364C YPT1P01123 206 aaKnown RBP3.01□□□□□ -1.93
CDC40YDR364C GAL4P04386 881 aa3.01□□□□□ -1.93
CDC40YDR364C YAK1P14680 807 aa3.01□□□□□ -1.93
CDC40YDR364C RVS161P25343 265 aaKnown RBP3.01□□□□□ -1.93
CDC40YDR364C SNC1P31109 117 aa3.01□□□□□ -1.93
CDC40YDR364C HMX1P32339 317 aa3.01□□□□□ -1.93
CDC40YDR364C RPT5P33297 434 aaKnown RBP3.01□□□□□ -1.93
CDC40YDR364C KKQ8P36004 724 aa3.01□□□□□ -1.93
CDC40YDR364C VPS21P36017 210 aaKnown RBP3.01□□□□□ -1.93
CDC40YDR364C MRPL17P36528 281 aa3.01□□□□□ -1.93
CDC40YDR364C YEL073CP39974 107 aa3.01□□□□□ -1.93
CDC40YDR364C YJL070CP40361 888 aa3.01□□□□□ -1.93
CDC40YDR364C AYR1P40471 297 aa3.01□□□□□ -1.93
CDC40YDR364C CFD1P40558 293 aa3.01□□□□□ -1.93
CDC40YDR364C YIL001WP40560 513 aa3.01□□□□□ -1.93
CDC40YDR364C FMP32P43557 207 aa3.01□□□□□ -1.93
CDC40YDR364C GET1P53192 235 aa3.01□□□□□ -1.93
CDC40YDR364C PCP1P53259 346 aa3.01□□□□□ -1.93
CDC40YDR364C YGR266WP53326 701 aa3.01□□□□□ -1.93
CDC40YDR364C YNL234WP53857 426 aa3.01□□□□□ -1.93
CDC40YDR364C YNL033WP53964 284 aa3.01□□□□□ -1.93
CDC40YDR364C YNL019CP53975 284 aa3.01□□□□□ -1.93
CDC40YDR364C RPM2Q02773 1202 aa3.01□□□□□ -1.93
CDC40YDR364C STD1Q02794 444 aa3.01□□□□□ -1.93
CDC40YDR364C YPL113CQ02961 396 aa3.01□□□□□ -1.93
CDC40YDR364C VHS1Q03785 461 aa3.01□□□□□ -1.93
CDC40YDR364C YDR124WQ04608 324 aa3.01□□□□□ -1.93
CDC40YDR364C YMR034CQ05131 434 aaPredicted RBP3.01□□□□□ -1.93
CDC40YDR364C ARV1Q06541 321 aa3.01□□□□□ -1.93
CDC40YDR364C MRPL35Q06678 367 aa3.01□□□□□ -1.93
CDC40YDR364C PLB3Q08108 686 aa3.01□□□□□ -1.93
CDC40YDR364C JLP1Q12358 412 aa3.01□□□□□ -1.93
CDC40YDR364C APC2Q12440 853 aa3.01□□□□□ -1.93
CDC40YDR364C SPO24Q3E752 67 aa3.01□□□□□ -1.93
CDC40YDR364C NAG1Q8TGN9 163 aa3.01□□□□□ -1.93
CDC40YDR364C TEL1P38110 2787 aa3.01□□□□□ -1.93
CDC40YDR364C OPI3P05375 206 aa3□□□□□ -1.93
CDC40YDR364C YLL053CP0CD98 152 aa3□□□□□ -1.93
CDC40YDR364C UNG1P12887 359 aa3□□□□□ -1.93
CDC40YDR364C UGA1P17649 471 aa3□□□□□ -1.93
CDC40YDR364C SEC62P21825 274 aa3□□□□□ -1.93
CDC40YDR364C SEC17P32602 292 aa3□□□□□ -1.93
CDC40YDR364C MGM101P32787 269 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C ATO2P32907 282 aa3□□□□□ -1.93
CDC40YDR364C AST1P35183 429 aa3□□□□□ -1.93
CDC40YDR364C FRE2P36033 711 aa3□□□□□ -1.93
CDC40YDR364C PDX3P38075 228 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C RRP3P38712 501 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C YPT35P38815 214 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C PEX18P38855 283 aa3□□□□□ -1.93
CDC40YDR364C YHR177WP38867 453 aa3□□□□□ -1.93
CDC40YDR364C FAA2P39518 744 aa3□□□□□ -1.93
CDC40YDR364C PRP39P39682 629 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C RGI1P40043 161 aaPredicted RBP3□□□□□ -1.93
CDC40YDR364C GVP36P40531 326 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C YIL024CP40543 189 aa3□□□□□ -1.93
CDC40YDR364C IRC7P43623 340 aa3□□□□□ -1.93
CDC40YDR364C HMS2P47175 358 aa3□□□□□ -1.93
CDC40YDR364C KEL2P50090 882 aa3□□□□□ -1.93
CDC40YDR364C RHO4Q00246 291 aa3□□□□□ -1.93
CDC40YDR364C IRC15Q02733 499 aa3□□□□□ -1.93
CDC40YDR364C YHC1Q05900 231 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C DIC1Q06143 298 aa3□□□□□ -1.93
CDC40YDR364C RRI1Q12468 440 aa3□□□□□ -1.93
CDC40YDR364C SNF8Q12483 233 aa3□□□□□ -1.93
CDC40YDR364C YKL018C-AQ3E7A7 99 aa3□□□□□ -1.93
CDC40YDR364C MEX67Q99257 599 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C NUM1Q00402 2748 aa3□□□□□ -1.93
CDC40YDR364C MDM35O60200 86 aa3□□□□□ -1.93
CDC40YDR364C TDH1P00360 332 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C BCY1P07278 416 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C PEX3P28795 441 aa3□□□□□ -1.93
CDC40YDR364C PAD1P33751 242 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
CDC40YDR364C SPT10P35208 640 aa3□□□□□ -1.93
CDC40YDR364C STP2P38704 541 aa3□□□□□ -1.93
CDC40YDR364C DED81P38707 554 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C ATG7P38862 630 aa3□□□□□ -1.93
CDC40YDR364C BAT1P38891 393 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C RIO2P40160 425 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C TIF34P40217 347 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C GAB1P41733 394 aa3□□□□□ -1.93
CDC40YDR364C VMA10P48836 114 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C PHB2P50085 310 aa3□□□□□ -1.93
CDC40YDR364C SDT1P53078 280 aa3□□□□□ -1.93
CDC40YDR364C VOA1P53262 265 aa3□□□□□ -1.93
CDC40YDR364C YNL095CP53932 642 aa3□□□□□ -1.93
CDC40YDR364C SKI8Q02793 397 aaPredicted RBP3□□□□□ -1.93
CDC40YDR364C CTL1Q03220 320 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C PEX12Q04370 399 aa3□□□□□ -1.93
CDC40YDR364C YLL007CQ07799 665 aa3□□□□□ -1.93
CDC40YDR364C MEU1Q07938 337 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
CDC40YDR364C SAM4Q08985 325 aaKnown RBP3□□□□□ -1.93
CDC40YDR364C YOR114WQ12219 294 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms