RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	STP22	P25604	385 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	FUN19	P28003	413 aa	Predicted RBP	10.81	□□□□□ -0.68
CUE1	YMR264W	DOA4	P32571	926 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	VPS17	P32913	551 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	NSG1	P38837	291 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	HPA3	P39979	161 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	HXT9	P40885	567 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	PMT5	P52867	743 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	HXT11	P54862	567 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	PLB2	Q03674	706 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	HLR1	Q04429	423 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	YPR109W	Q06104	294 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	TPO3	Q06451	622 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	NBA1	Q08229	501 aa	Known RBP	10.81	□□□□□ -0.68
CUE1	YMR264W	YOR283W	Q12040	230 aa	Known RBP	10.81	□□□□□ -0.68
CUE1	YMR264W	YDL109C	Q12103	647 aa		10.81	□□□□□ -0.68
CUE1	YMR264W	FAS1	P07149	2051 aa	Known RBP	10.81	□□□□□ -0.68
CUE1	YMR264W	QCR7	P00128	127 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	DAT1	P13483	248 aa	Known RBP	10.8	□□□□□ -0.68
CUE1	YMR264W	STE12	P13574	688 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	BOS1	P25385	244 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	10.8	□□□□□ -0.68	not detected
CUE1	YMR264W	HYM1	P32464	399 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	CLG1	P35190	452 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	GPX1	P36014	167 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	ANR2	P36090	516 aa	Predicted RBP	10.8	□□□□□ -0.68
CUE1	YMR264W	UTH1	P36135	365 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	CHK1	P38147	527 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	VMA22	P38784	181 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	PMT6	P42934	759 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	YGR266W	P53326	701 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	OGG1	P53397	376 aa	Predicted RBP	10.8	□□□□□ -0.68
CUE1	YMR264W	LSM7	P53905	115 aa	Known RBP	10.8	□□□□□ -0.68
CUE1	YMR264W	YLR460C	P54007	376 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	NUP116	Q02630	1113 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	PHO92	Q06390	306 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	YOR378W	Q08902	515 aa		10.8	□□□□□ -0.68
CUE1	YMR264W	CYC1	P00044	109 aa	Predicted RBP	10.79	□□□□□ -0.68
CUE1	YMR264W	GCN4	P03069	281 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	RPL6B	P05739	176 aa	Known RBP	10.79	□□□□□ -0.68
CUE1	YMR264W	NUP1	P20676	1076 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	TAF14	P35189	244 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	MTH1	P35198	433 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	VBA2	P38358	474 aa	Known RBP	10.79	□□□□□ -0.68
CUE1	YMR264W	FET3	P38993	636 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	SIT1	P39980	628 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	SEH1	P53011	349 aa	Known RBP	10.79	□□□□□ -0.68
CUE1	YMR264W	TPP1	Q03796	238 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	RBS1	Q05672	457 aa	Known RBP	10.79	□□□□□ -0.68
CUE1	YMR264W	ATG41	Q12048	136 aa		10.79	□□□□□ -0.68
CUE1	YMR264W	FLP1	P03870	423 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	CDC9	P04819	755 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	HIS3	P06633	220 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	MRP1	P10662	321 aa	Known RBP	10.78	□□□□□ -0.68
CUE1	YMR264W	ERG9	P29704	444 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	FAA1	P30624	700 aa	Known RBP	10.78	□□□□□ -0.68
CUE1	YMR264W	TRS65	P32893	560 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	SLC1	P33333	303 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	HIS7	P33734	552 aa	Known RBP	10.78	□□□□□ -0.68
CUE1	YMR264W	MSS4	P38994	779 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	RPE1	P46969	238 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	YJR115W	P47152	169 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	SAY1	P53324	424 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	EKI1	Q03764	534 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	RRP9	Q06506	573 aa	Known RBP	10.78	□□□□□ -0.68
CUE1	YMR264W	AIM6	Q07716	390 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	COQ10	Q08058	207 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	YOL073C	Q08232	322 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	HRT1	Q08273	121 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	ENB1	Q08299	606 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	RDR1	Q08904	546 aa		10.78	□□□□□ -0.68
CUE1	YMR264W	COX9	P07255	59 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	PET54	P10834	293 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	PAU2	P32612	120 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	YBR242W	P38331	238 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	MTC4	P38335	694 aa	Known RBP	10.77	□□□□□ -0.69
CUE1	YMR264W	PTH1	P38876	190 aa	Known RBP	10.77	□□□□□ -0.69
CUE1	YMR264W	YNL208W	P40159	199 aa	Known RBP	10.77	□□□□□ -0.69
CUE1	YMR264W	DOC1	P53068	250 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	YMR210W	Q03649	449 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	PAL1	Q05518	499 aa	Known RBP	10.77	□□□□□ -0.69
CUE1	YMR264W	ORM2	Q06144	216 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	MCP1	Q12106	302 aa		10.77	□□□□□ -0.69
CUE1	YMR264W	PRP46	Q12417	451 aa	Predicted RBP	10.77	□□□□□ -0.69
CUE1	YMR264W	PEP4	P07267	405 aa	Known RBP	10.76	□□□□□ -0.69
CUE1	YMR264W	NCP1	P16603	691 aa	Known RBP	10.76	□□□□□ -0.69
CUE1	YMR264W	GRX2	P17695	143 aa	Known RBP	10.76	□□□□□ -0.69
CUE1	YMR264W	GLK1	P17709	500 aa	Known RBP	10.76	□□□□□ -0.69
CUE1	YMR264W	SAR1	P20606	190 aa	Known RBP	10.76	□□□□□ -0.69
CUE1	YMR264W	PUP1	P25043	261 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	ATG22	P25568	528 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	RNP1	P32385	249 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	MKK2	P32491	506 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	PPQ1	P32945	549 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	MSN4	P33749	630 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	UTP30	P36144	274 aa	Known RBP	10.76	□□□□□ -0.69
CUE1	YMR264W	YHR180W	P38868	163 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	YJL193W	P39542	402 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	SHR5	P41912	237 aa		10.76	□□□□□ -0.69
CUE1	YMR264W	DPB11	P47027	764 aa	Predicted RBP	10.76	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 105.8 ms