RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W LSM5P40089 93 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W YNL195CP40168 261 aa3.52□□□□□ -1.85
ECM16YMR128W YFR020WP43600 232 aa3.52□□□□□ -1.85
ECM16YMR128W MTL1P53214 551 aa3.52□□□□□ -1.85
ECM16YMR128W YGR067CP53243 804 aa3.52□□□□□ -1.85
ECM16YMR128W NUP116Q02630 1113 aa3.52□□□□□ -1.85
ECM16YMR128W YDR514CQ04408 483 aa3.52□□□□□ -1.85
ECM16YMR128W NNT1Q05874 261 aa3.52□□□□□ -1.85
ECM16YMR128W TDA6Q06466 467 aa3.52□□□□□ -1.85
ECM16YMR128W SOD2P00447 233 aa3.52□□□□□ -1.85
ECM16YMR128W AAC3P18238 307 aa3.52□□□□□ -1.85
ECM16YMR128W PRE7P23724 241 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W GPI12P23797 304 aa3.52□□□□□ -1.85
ECM16YMR128W CPR3P25719 182 aa3.52□□□□□ -1.85
ECM16YMR128W SFC1P33303 322 aa3.52□□□□□ -1.85
ECM16YMR128W APL3P38065 1025 aa3.52□□□□□ -1.85
ECM16YMR128W YJR111CP47148 283 aaKnown RBP3.52□□□□□ -1.85
ECM16YMR128W MNT2P53059 558 aa3.52□□□□□ -1.85
ECM16YMR128W CDH1P53197 566 aa3.52□□□□□ -1.85
ECM16YMR128W OAZ1Q02803 292 aa3.52□□□□□ -1.85
ECM16YMR128W GPN3Q06543 272 aa3.52□□□□□ -1.85
ECM16YMR128W BSP1Q06604 576 aa3.52□□□□□ -1.85
ECM16YMR128W INP53Q12271 1107 aa3.52□□□□□ -1.85
ECM16YMR128W NHP6BP11633 99 aaKnown RBP3.51□□□□□ -1.85
ECM16YMR128W ERD2P18414 219 aa3.51□□□□□ -1.85
ECM16YMR128W PTR2P32901 601 aa3.51□□□□□ -1.85
ECM16YMR128W PXA2P34230 853 aa3.51□□□□□ -1.85
ECM16YMR128W MIA40P36046 403 aa3.51□□□□□ -1.85
ECM16YMR128W ANR2P36090 516 aaPredicted RBP3.51□□□□□ -1.85
ECM16YMR128W BUR6P40096 142 aa3.51□□□□□ -1.85
ECM16YMR128W YJR149WP47177 404 aa3.51□□□□□ -1.85
ECM16YMR128W VEL1P53058 206 aa3.51□□□□□ -1.85
ECM16YMR128W VHS1Q03785 461 aa3.51□□□□□ -1.85
ECM16YMR128W YLR346CQ06139 101 aa3.51□□□□□ -1.85
ECM16YMR128W YLR040CQ07988 224 aa3.51□□□□□ -1.85
ECM16YMR128W YIL002W-AQ3E7Z5 69 aa3.51□□□□□ -1.85
ECM16YMR128W HOP1P20050 605 aa3.51□□□□□ -1.85
ECM16YMR128W TEF4P36008 412 aaKnown RBP3.51□□□□□ -1.85
ECM16YMR128W KAE1P36132 386 aa3.51□□□□□ -1.85
ECM16YMR128W MRPL40P36534 297 aa3.51□□□□□ -1.85
ECM16YMR128W UBS1P38290 277 aa3.51□□□□□ -1.85
ECM16YMR128W YHC3P47040 408 aa3.51□□□□□ -1.85
ECM16YMR128W MNN10P50108 393 aaKnown RBP3.51□□□□□ -1.85
ECM16YMR128W DOC1P53068 250 aa3.51□□□□□ -1.85
ECM16YMR128W TIM44Q01852 431 aa3.51□□□□□ -1.85
ECM16YMR128W ASR1Q06834 288 aa3.51□□□□□ -1.85
ECM16YMR128W STP4Q07351 490 aa3.51□□□□□ -1.85
ECM16YMR128W AEP3Q12089 606 aa3.51□□□□□ -1.85
ECM16YMR128W PER33Q12144 273 aa3.51□□□□□ -1.85
ECM16YMR128W RRP42Q12277 265 aaPredicted RBP3.51□□□□□ -1.85
ECM16YMR128W SNU23Q12368 194 aaPredicted RBP3.51□□□□□ -1.85
ECM16YMR128W ISN1Q99312 450 aa3.51□□□□□ -1.85
ECM16YMR128W IPP1P00817 287 aaKnown RBP3.51□□□□□ -1.85
ECM16YMR128W APN1P22936 367 aa3.51□□□□□ -1.85
ECM16YMR128W PGS1P25578 521 aa3.51□□□□□ -1.85
ECM16YMR128W PMT2P31382 759 aa3.51□□□□□ -1.85
ECM16YMR128W PET127P32606 800 aa3.51□□□□□ -1.85
ECM16YMR128W EMP24P32803 203 aaKnown RBP3.51□□□□□ -1.85
ECM16YMR128W TSA1P34760 196 aaKnown RBP3.51□□□□□ -1.85
ECM16YMR128W THI2P38141 450 aa3.51□□□□□ -1.85
ECM16YMR128W LAG1P38703 411 aa3.51□□□□□ -1.85
ECM16YMR128W CHS7P38843 316 aa3.51□□□□□ -1.85
ECM16YMR128W PFA3P42836 336 aa3.51□□□□□ -1.85
ECM16YMR128W BNA2P47125 453 aa3.51□□□□□ -1.85
ECM16YMR128W MDM34P53083 459 aa3.51□□□□□ -1.85
ECM16YMR128W ROG1P53118 685 aa3.51□□□□□ -1.85
ECM16YMR128W PGA1P53896 198 aa3.51□□□□□ -1.85
ECM16YMR128W ASI3P53983 676 aa3.51□□□□□ -1.85
ECM16YMR128W RBS1Q05672 457 aaKnown RBP3.51□□□□□ -1.85
ECM16YMR128W YPR114WQ06107 315 aa3.51□□□□□ -1.85
ECM16YMR128W BOP2Q06150 570 aa3.51□□□□□ -1.85
ECM16YMR128W DGK1Q12382 290 aa3.51□□□□□ -1.85
ECM16YMR128W RDI1Q12434 202 aa3.51□□□□□ -1.85
ECM16YMR128W YJR112W-AQ3E743 109 aa3.51□□□□□ -1.85
ECM16YMR128W GCN4P03069 281 aa3.5□□□□□ -1.85
ECM16YMR128W ZWF1P11412 505 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W SEC22P22214 214 aa3.5□□□□□ -1.85
ECM16YMR128W PDR3P33200 976 aa3.5□□□□□ -1.85
ECM16YMR128W TCD2P36101 447 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W PAU24P38155 120 aa3.5□□□□□ -1.85
ECM16YMR128W YHR127WP38833 243 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W YER158CP40095 573 aa3.5□□□□□ -1.85
ECM16YMR128W RFC4P40339 323 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W RFC2P40348 353 aa3.5□□□□□ -1.85
ECM16YMR128W AIM25P47140 327 aa3.5□□□□□ -1.85
ECM16YMR128W YGL159WP53110 370 aa3.5□□□□□ -1.85
ECM16YMR128W BUD25P85052 153 aa3.5□□□□□ -1.85
ECM16YMR128W BRX1Q08235 291 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W SCP1Q08873 200 aa3.5□□□□□ -1.85
ECM16YMR128W YLR108CQ12259 485 aa3.5□□□□□ -1.85
ECM16YMR128W LSO2Q3E772 92 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W CCH1P50077 2039 aa3.5□□□□□ -1.85
ECM16YMR128W ADK1P07170 222 aaKnown RBP3.5□□□□□ -1.85
ECM16YMR128W HOM3P10869 527 aa3.5□□□□□ -1.85
ECM16YMR128W SNF6P18888 332 aa3.5□□□□□ -1.85
ECM16YMR128W PDE1P22434 369 aa3.5□□□□□ -1.85
ECM16YMR128W YCR061WP25639 631 aa3.5□□□□□ -1.85
ECM16YMR128W POT1P27796 417 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
ECM16YMR128W FUN26P31381 517 aa3.5□□□□□ -1.85
ECM16YMR128W MRP20P32387 263 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 130 ms