RNA–Protein interactions for RNA: YML085C

TUB1, Transcript of Alpha-tubulin, yeastyeast

Gene TUB1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUB1YML085C XBP1P40489 647 aa6.33□□□□□ -1.4
TUB1YML085C NIT2P47016 307 aa6.33□□□□□ -1.4
TUB1YML085C RBL2P48606 106 aaKnown RBP6.33□□□□□ -1.4
TUB1YML085C ALG12P53730 551 aa6.33□□□□□ -1.4
TUB1YML085C NUP116Q02630 1113 aa6.33□□□□□ -1.4
TUB1YML085C TLG1Q03322 224 aa6.33□□□□□ -1.4
TUB1YML085C VBA4Q04602 768 aaKnown RBP6.33□□□□□ -1.4
TUB1YML085C ELP6Q04868 273 aa6.33□□□□□ -1.4
TUB1YML085C GAS2Q06135 555 aa6.33□□□□□ -1.4
TUB1YML085C YOR289WQ12012 251 aaPredicted RBP6.33□□□□□ -1.4
TUB1YML085C YRA1Q12159 226 aaKnown RBP6.33□□□□□ -1.4
TUB1YML085C YDL177CQ12257 170 aa6.33□□□□□ -1.4
TUB1YML085C TRM10Q12400 293 aa6.33□□□□□ -1.4
TUB1YML085C FLO9P39712 1322 aa6.32□□□□□ -1.4
TUB1YML085C MSW1P04803 379 aa6.32□□□□□ -1.4
TUB1YML085C PRB1P09232 635 aa6.32□□□□□ -1.4
TUB1YML085C YME2P32843 850 aa6.32□□□□□ -1.4
TUB1YML085C SUR1P33300 382 aa6.32□□□□□ -1.4
TUB1YML085C AMN1P38285 549 aaPredicted RBP6.32□□□□□ -1.4
TUB1YML085C YHR035WP38769 630 aa6.32□□□□□ -1.4
TUB1YML085C SOP4P39543 234 aaPredicted RBP6.32□□□□□ -1.4
TUB1YML085C IES5P40060 125 aa6.32□□□□□ -1.4
TUB1YML085C HIS6P40545 261 aa6.32□□□□□ -1.4
TUB1YML085C YFR054CP43622 192 aa6.32□□□□□ -1.4
TUB1YML085C SOK2P53438 785 aaPredicted RBP6.32□□□□□ -1.4
TUB1YML085C BUD17P53727 317 aa6.32□□□□□ -1.4
TUB1YML085C MRPL19P53875 158 aa6.32□□□□□ -1.4
TUB1YML085C SNZ1Q03148 297 aa6.32□□□□□ -1.4
TUB1YML085C YMR315WQ04869 349 aaKnown RBP6.32□□□□□ -1.4
TUB1YML085C MRPL51Q06090 140 aaPredicted RBP6.32□□□□□ -1.4
TUB1YML085C YLR346CQ06139 101 aa6.32□□□□□ -1.4
TUB1YML085C YPR147CQ06522 304 aaKnown RBP6.32□□□□□ -1.4
TUB1YML085C SIA1Q12212 622 aa6.32□□□□□ -1.4
TUB1YML085C YOR343CQ12484 108 aa6.32□□□□□ -1.4
TUB1YML085C YPL119C-AQ3E751 87 aa6.32□□□□□ -1.4
TUB1YML085C MET2P08465 486 aa6.31□□□□□ -1.4
TUB1YML085C CAM1P29547 415 aaKnown RBP6.31□□□□□ -1.4
TUB1YML085C PRE2P30656 287 aaKnown RBP6.31□□□□□ -1.4
TUB1YML085C VMA6P32366 345 aaKnown RBP6.31□□□□□ -1.4
TUB1YML085C TIF3P34167 436 aaKnown RBP6.31□□□□□ -1.4
TUB1YML085C YKL077WP36081 392 aa6.31□□□□□ -1.4
TUB1YML085C MRPL39P36533 70 aa6.31□□□□□ -1.4
TUB1YML085C YBR096WP38256 230 aa6.31□□□□□ -1.4
TUB1YML085C IPT1P38954 527 aa6.31□□□□□ -1.4
TUB1YML085C MPH1P40562 993 aa6.31□□□□□ -1.4
TUB1YML085C IRC5P43610 853 aa6.31□□□□□ -1.4
TUB1YML085C YGR126WP53274 230 aa6.31□□□□□ -1.4
TUB1YML085C SNF12P53628 566 aa6.31□□□□□ -1.4
TUB1YML085C NOG1Q02892 647 aaKnown RBP6.31□□□□□ -1.4
TUB1YML085C YMR099CQ03161 297 aaKnown RBP6.31□□□□□ -1.4
TUB1YML085C YLR345WQ06137 509 aa6.31□□□□□ -1.4
TUB1YML085C BTS1Q12051 335 aa6.31□□□□□ -1.4
TUB1YML085C ACF2Q12168 779 aa6.31□□□□□ -1.4
TUB1YML085C PST2Q12335 198 aaKnown RBP6.31□□□□□ -1.4
TUB1YML085C STE50P25344 346 aa6.3□□□□□ -1.4
TUB1YML085C THI4P32318 326 aa6.3□□□□□ -1.4
TUB1YML085C MDH3P32419 343 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
TUB1YML085C ECM4P36156 370 aa6.3□□□□□ -1.4
TUB1YML085C GOS1P38736 223 aa6.3□□□□□ -1.4
TUB1YML085C PHO90P39535 881 aa6.3□□□□□ -1.4
TUB1YML085C KRE29P40026 464 aa6.3□□□□□ -1.4
TUB1YML085C DDI1P40087 428 aa6.3□□□□□ -1.4
TUB1YML085C SFH5P47008 294 aa6.3□□□□□ -1.4
TUB1YML085C MON1P53129 644 aa6.3□□□□□ -1.4
TUB1YML085C OST6Q03723 332 aa6.3□□□□□ -1.4
TUB1YML085C FIN1Q03898 291 aa6.3□□□□□ -1.4
TUB1YML085C NEJ1Q06148 342 aa6.3□□□□□ -1.4
TUB1YML085C PRP8P33334 2413 aaKnown RBP6.3□□□□□ -1.4
TUB1YML085C URE2P23202 354 aaKnown RBP6.29□□□□□ -1.4
TUB1YML085C CNA1P23287 553 aa6.29□□□□□ -1.4
TUB1YML085C PAD1P33751 242 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
TUB1YML085C AHP1P38013 176 aaKnown RBP6.29□□□□□ -1.4
TUB1YML085C RPP1P38786 293 aa6.29□□□□□ -1.4
TUB1YML085C RFC4P40339 323 aaKnown RBP6.29□□□□□ -1.4
TUB1YML085C IRC7P43623 340 aa6.29□□□□□ -1.4
TUB1YML085C MSY1P48527 492 aa6.29□□□□□ -1.4
TUB1YML085C BUD9P53226 547 aa6.29□□□□□ -1.4
TUB1YML085C YMR087WQ04299 284 aa6.29□□□□□ -1.4
TUB1YML085C LUC7Q07508 261 aaPredicted RBP6.29□□□□□ -1.4
TUB1YML085C YDL114WQ07530 308 aa6.29□□□□□ -1.4
TUB1YML085C BAG7Q12128 409 aa6.29□□□□□ -1.4
TUB1YML085C RRI1Q12468 440 aa6.29□□□□□ -1.4
TUB1YML085C RPB8P20436 146 aa6.28□□□□□ -1.4
TUB1YML085C MDH2P22133 377 aa6.28□□□□□ -1.4
TUB1YML085C RPS5P26783 225 aaKnown RBP6.28□□□□□ -1.4
TUB1YML085C MCM10P32354 571 aa6.28□□□□□ -1.4
TUB1YML085C ECT1P33412 323 aa6.28□□□□□ -1.4
TUB1YML085C SRP102P36057 244 aaPredicted RBP6.28□□□□□ -1.4
TUB1YML085C YMR262WP38430 313 aa6.28□□□□□ -1.4
TUB1YML085C SLZ1P40167 298 aa6.28□□□□□ -1.4
TUB1YML085C PGA1P53896 198 aa6.28□□□□□ -1.4
TUB1YML085C PET191Q02772 108 aa6.28□□□□□ -1.4
TUB1YML085C MIM1Q08176 113 aa6.28□□□□□ -1.4
TUB1YML085C RTC5Q12108 567 aaKnown RBP6.28□□□□□ -1.4
TUB1YML085C YDL180WQ12301 547 aa6.28□□□□□ -1.4
TUB1YML085C SCEIP03882 235 aa6.27□□□□□ -1.41
TUB1YML085C MCM1P11746 286 aa6.27□□□□□ -1.41
TUB1YML085C MDH1P17505 334 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
TUB1YML085C FUN19P28003 413 aaPredicted RBP6.27□□□□□ -1.41
TUB1YML085C MTC2P34246 357 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 85 ms