RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W NOP19P53317 196 aaPredicted RBP3.3□□□□□ -1.88
LCB5YLR260W MRPL50P53724 139 aa3.3□□□□□ -1.88
LCB5YLR260W FAR8Q05040 523 aa3.3□□□□□ -1.88
LCB5YLR260W LDB18Q07887 179 aa3.3□□□□□ -1.88
LCB5YLR260W TEN1Q07921 160 aa3.3□□□□□ -1.88
LCB5YLR260W AAD15Q08361 143 aa3.3□□□□□ -1.88
LCB5YLR260W YOR365CQ08844 703 aa3.3□□□□□ -1.88
LCB5YLR260W BAG7Q12128 409 aa3.3□□□□□ -1.88
LCB5YLR260W MSH5Q12175 901 aa3.3□□□□□ -1.88
LCB5YLR260W YIL046W-AQ3E7Z4 54 aa3.3□□□□□ -1.88
LCB5YLR260W RAD1P06777 1100 aa3.29□□□□□ -1.88
LCB5YLR260W AMD1P15274 810 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W CKI1P20485 582 aa3.29□□□□□ -1.88
LCB5YLR260W SGV1P23293 657 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W GIT1P25346 518 aa3.29□□□□□ -1.88
LCB5YLR260W RNQ1P25367 405 aa3.29□□□□□ -1.88
LCB5YLR260W ERG9P29704 444 aa3.29□□□□□ -1.88
LCB5YLR260W VMA6P32366 345 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W TAF14P35189 244 aa3.29□□□□□ -1.88
LCB5YLR260W SPT10P35208 640 aa3.29□□□□□ -1.88
LCB5YLR260W SEO1P39709 593 aa3.29□□□□□ -1.88
LCB5YLR260W ECM10P39987 644 aa3.29□□□□□ -1.88
LCB5YLR260W UTP25P40498 721 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W PAC11P40960 533 aa3.29□□□□□ -1.88
LCB5YLR260W YFR020WP43600 232 aa3.29□□□□□ -1.88
LCB5YLR260W MRX5P47007 382 aa3.29□□□□□ -1.88
LCB5YLR260W ALB1P47019 175 aaPredicted RBP3.29□□□□□ -1.88
LCB5YLR260W TAF6P53040 516 aa3.29□□□□□ -1.88
LCB5YLR260W YPR003CP53394 754 aa3.29□□□□□ -1.88
LCB5YLR260W CDC14Q00684 551 aa3.29□□□□□ -1.88
LCB5YLR260W RNT1Q02555 471 aa3.29□□□□□ -1.88
LCB5YLR260W SLU7Q02775 382 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W YDR109CQ04585 715 aa3.29□□□□□ -1.88
LCB5YLR260W ECI1Q05871 280 aa3.29□□□□□ -1.88
LCB5YLR260W COQ11Q05892 277 aa3.29□□□□□ -1.88
LCB5YLR260W BUR2Q05949 395 aa3.29□□□□□ -1.88
LCB5YLR260W CDA2Q06703 312 aa3.29□□□□□ -1.88
LCB5YLR260W YEH2Q07950 538 aa3.29□□□□□ -1.88
LCB5YLR260W PFA4Q12006 378 aa3.29□□□□□ -1.88
LCB5YLR260W SLF1Q12034 447 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W SWM1Q12379 170 aa3.29□□□□□ -1.88
LCB5YLR260W YPR1Q12458 312 aa3.29□□□□□ -1.88
LCB5YLR260W RRI1Q12468 440 aa3.29□□□□□ -1.88
LCB5YLR260W YCL012CQ8J0M4 134 aa3.29□□□□□ -1.88
LCB5YLR260W HFA1P32874 2273 aa3.29□□□□□ -1.88
LCB5YLR260W SCEIP03882 235 aa3.29□□□□□ -1.88
LCB5YLR260W HIS3P06633 220 aa3.29□□□□□ -1.88
LCB5YLR260W COR1P07256 457 aa3.29□□□□□ -1.88
LCB5YLR260W PPH21P23594 369 aa3.29□□□□□ -1.88
LCB5YLR260W FES1P38260 290 aa3.29□□□□□ -1.88
LCB5YLR260W LEU5P38702 357 aa3.29□□□□□ -1.88
LCB5YLR260W RRP4P38792 359 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W PCL5P38794 229 aa3.29□□□□□ -1.88
LCB5YLR260W LNP1P38878 278 aa3.29□□□□□ -1.88
LCB5YLR260W SOP4P39543 234 aaPredicted RBP3.29□□□□□ -1.88
LCB5YLR260W RPH1P39956 796 aa3.29□□□□□ -1.88
LCB5YLR260W YER121WP40076 114 aa3.29□□□□□ -1.88
LCB5YLR260W GAT2P40209 560 aa3.29□□□□□ -1.88
LCB5YLR260W URM1P40554 99 aaPredicted RBP3.29□□□□□ -1.88
LCB5YLR260W LSM1P47017 172 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W CWC23P52868 283 aaPredicted RBP3.29□□□□□ -1.88
LCB5YLR260W CTK1Q03957 528 aaKnown RBP3.29□□□□□ -1.88
LCB5YLR260W YMR087WQ04299 284 aa3.29□□□□□ -1.88
LCB5YLR260W EMI1Q04406 187 aa3.29□□□□□ -1.88
LCB5YLR260W SML1Q04964 104 aa3.29□□□□□ -1.88
LCB5YLR260W ARO10Q06408 635 aa3.29□□□□□ -1.88
LCB5YLR260W ESA1Q08649 445 aa3.29□□□□□ -1.88
LCB5YLR260W VPS68Q12016 184 aa3.29□□□□□ -1.88
LCB5YLR260W BRR2P32639 2163 aaKnown RBP3.28□□□□□ -1.88
LCB5YLR260W RHO2P06781 192 aa3.28□□□□□ -1.88
LCB5YLR260W YKR104WP0CE69 306 aa3.28□□□□□ -1.88
LCB5YLR260W DAL82P21705 255 aa3.28□□□□□ -1.88
LCB5YLR260W GAS1P22146 559 aaKnown RBP3.28□□□□□ -1.88
LCB5YLR260W DBR1P24309 405 aaKnown RBP3.28□□□□□ -1.88
LCB5YLR260W MSK1P32048 576 aa3.28□□□□□ -1.88
LCB5YLR260W ACH1P32316 526 aa3.28□□□□□ -1.88
LCB5YLR260W GDA1P32621 518 aa3.28□□□□□ -1.88
LCB5YLR260W REC114P32841 428 aa3.28□□□□□ -1.88
LCB5YLR260W SOF1P33750 489 aaKnown RBP3.28□□□□□ -1.88
LCB5YLR260W HES1P35843 434 aa3.28□□□□□ -1.88
LCB5YLR260W YKL162CP36052 402 aa3.28□□□□□ -1.88
LCB5YLR260W STP2P38704 541 aa3.28□□□□□ -1.88
LCB5YLR260W CYC2P38909 366 aa3.28□□□□□ -1.88
LCB5YLR260W YNL194CP40169 301 aa3.28□□□□□ -1.88
LCB5YLR260W SPT20P50875 604 aa3.28□□□□□ -1.88
LCB5YLR260W LSG1P53145 640 aaKnown RBP3.28□□□□□ -1.88
LCB5YLR260W GOR1P53839 350 aa3.28□□□□□ -1.88
LCB5YLR260W YPR022CQ12139 1133 aa3.28□□□□□ -1.88
LCB5YLR260W CSF1Q12150 2958 aa3.28□□□□□ -1.88
LCB5YLR260W RPS13P05756 151 aaKnown RBP3.28□□□□□ -1.89
LCB5YLR260W IMA3P0CW40 589 aa3.28□□□□□ -1.89
LCB5YLR260W IMA4P0CW41 589 aa3.28□□□□□ -1.89
LCB5YLR260W HSP26P15992 214 aaKnown RBP RIP-Chip data3.28□□□□□ -1.89not detected
LCB5YLR260W EPT1P22140 391 aa3.28□□□□□ -1.89
LCB5YLR260W CNE1P27825 502 aa3.28□□□□□ -1.89
LCB5YLR260W CDC5P32562 705 aa3.28□□□□□ -1.89
LCB5YLR260W RPL32P38061 130 aaKnown RBP3.28□□□□□ -1.89
LCB5YLR260W DTR1P38125 572 aa3.28□□□□□ -1.89
LCB5YLR260W RRN10P38204 145 aa3.28□□□□□ -1.89
LCB5YLR260W FIG1P38224 298 aa3.28□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms