RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YPS5	P53057	165 aa		4.46	□□□□□ -1.7
RSA3	YLR221C	NRM1	P53718	249 aa		4.46	□□□□□ -1.7
RSA3	YLR221C	SNX41	Q04053	625 aa		4.46	□□□□□ -1.7
RSA3	YLR221C	SRO7	Q12038	1033 aa		4.46	□□□□□ -1.7
RSA3	YLR221C	UTP23	Q12339	254 aa	Known RBP	4.46	□□□□□ -1.7
RSA3	YLR221C	INO80	P53115	1489 aa		4.45	□□□□□ -1.7
RSA3	YLR221C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
RSA3	YLR221C	HIS2	P38635	335 aa		4.45	□□□□□ -1.7
RSA3	YLR221C	SWC4	P53201	476 aa		4.45	□□□□□ -1.7
RSA3	YLR221C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
RSA3	YLR221C	MRPS16	Q02608	121 aa		4.45	□□□□□ -1.7
RSA3	YLR221C	SCS7	Q03529	384 aa		4.45	□□□□□ -1.7
RSA3	YLR221C	BER1	Q06688	274 aa	Known RBP	4.45	□□□□□ -1.7
RSA3	YLR221C	YOR376W	Q08900	122 aa		4.45	□□□□□ -1.7
RSA3	YLR221C	FMP16	Q12497	93 aa		4.45	□□□□□ -1.7
RSA3	YLR221C	SPS100	P13130	326 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	BGL2	P15703	313 aa	Known RBP	4.44	□□□□□ -1.7
RSA3	YLR221C	PCL1	P24867	279 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
RSA3	YLR221C	PET100	P38958	111 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	SOP4	P39543	234 aa	Predicted RBP	4.44	□□□□□ -1.7
RSA3	YLR221C	TIS11	P47977	285 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	SED5	Q01590	340 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	RMI1	Q02685	241 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	MRX11	Q03079	207 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	MMT2	Q08970	484 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	ERP3	Q12403	225 aa		4.44	□□□□□ -1.7
RSA3	YLR221C	RPL16B	P26785	198 aa	Known RBP	4.43	□□□□□ -1.7
RSA3	YLR221C	MCH2	P36032	473 aa		4.43	□□□□□ -1.7
RSA3	YLR221C	TDA11	P38854	504 aa		4.43	□□□□□ -1.7
RSA3	YLR221C	TPS1	Q00764	495 aa	Known RBP	4.43	□□□□□ -1.7
RSA3	YLR221C	YPL077C	Q02831	240 aa		4.43	□□□□□ -1.7
RSA3	YLR221C	PSK1	P31374	1356 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	ATP6	P00854	259 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	RPL31A	P0C2H8	113 aa	Known RBP	4.42	□□□□□ -1.7
RSA3	YLR221C	HPR1	P17629	752 aa	Known RBP	4.42	□□□□□ -1.7
RSA3	YLR221C	INO2	P26798	304 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	RCK1	P38622	512 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	AGP3	P43548	558 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	HIT1	P46973	164 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	YGL262W	P53054	175 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	TPC1	P53257	314 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	TSA2	Q04120	196 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	GPN3	Q06543	272 aa		4.42	□□□□□ -1.7
RSA3	YLR221C	YPL245W	Q12179	454 aa	Known RBP	4.42	□□□□□ -1.7
RSA3	YLR221C	PRP46	Q12417	451 aa	Predicted RBP	4.42	□□□□□ -1.7
RSA3	YLR221C	EPT1	P22140	391 aa		4.41	□□□□□ -1.7
RSA3	YLR221C	SPS19	P32573	292 aa	Known RBP	4.41	□□□□□ -1.7
RSA3	YLR221C	MRPL27	P36526	146 aa	Predicted RBP	4.41	□□□□□ -1.7
RSA3	YLR221C	MRPL37	P36532	105 aa		4.41	□□□□□ -1.7
RSA3	YLR221C	SDS24	P38314	527 aa		4.41	□□□□□ -1.7
RSA3	YLR221C	GGC1	P38988	300 aa		4.41	□□□□□ -1.7
RSA3	YLR221C	MRX5	P47007	382 aa		4.41	□□□□□ -1.7
RSA3	YLR221C	RPL21A	Q02753	160 aa	Known RBP	4.41	□□□□□ -1.7
RSA3	YLR221C	MCH1	Q07376	486 aa		4.41	□□□□□ -1.7
RSA3	YLR221C	RRP42	Q12277	265 aa	Predicted RBP	4.41	□□□□□ -1.7
RSA3	YLR221C	RPL24A	P04449	155 aa	Known RBP	4.4	□□□□□ -1.71
RSA3	YLR221C	FRS2	P15625	503 aa	Known RBP	4.4	□□□□□ -1.71
RSA3	YLR221C	YKL187C	P34231	750 aa		4.4	□□□□□ -1.71
RSA3	YLR221C	YKL063C	P35725	167 aa		4.4	□□□□□ -1.71
RSA3	YLR221C	UTH1	P36135	365 aa		4.4	□□□□□ -1.71
RSA3	YLR221C	ADD37	Q03233	198 aa		4.4	□□□□□ -1.71
RSA3	YLR221C	CSI1	Q04368	295 aa		4.4	□□□□□ -1.71
RSA3	YLR221C	KAP95	Q06142	861 aa	Known RBP	4.4	□□□□□ -1.71
RSA3	YLR221C	ASR1	Q06834	288 aa		4.4	□□□□□ -1.71
RSA3	YLR221C	CBP6	P07253	162 aa	Predicted RBP	4.39	□□□□□ -1.71
RSA3	YLR221C	MRPL20	P22354	195 aa	Predicted RBP	4.39	□□□□□ -1.71
RSA3	YLR221C	IFM1	P25038	676 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	RPC37	P36121	282 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	RCY1	P39531	840 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	YIA6	P40556	373 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	UBC13	P52490	153 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	VEL1	P53058	206 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	SDS23	P53172	527 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	MPP6	P53725	186 aa	Predicted RBP	4.39	□□□□□ -1.71
RSA3	YLR221C	TFC7	Q12415	435 aa		4.39	□□□□□ -1.71
RSA3	YLR221C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
RSA3	YLR221C	TIP20	P33891	701 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	SLM1	P40485	686 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	GDS1	P41913	522 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	FMP33	P46998	180 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	PGU1	P47180	361 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	SPP2	Q02521	185 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	API2	Q04413	109 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	YLR446W	Q06204	433 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	YPR064W	Q12492	139 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	LAG2	Q92325	660 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	BI3	Q9ZZW7	517 aa		4.38	□□□□□ -1.71
RSA3	YLR221C	ILV1	P00927	576 aa	Known RBP	4.37	□□□□□ -1.71
RSA3	YLR221C	YSR3	P23501	404 aa		4.37	□□□□□ -1.71
RSA3	YLR221C	GCG1	P32656	232 aa	Known RBP	4.37	□□□□□ -1.71
RSA3	YLR221C	PRS1	P32895	427 aa	Known RBP	4.37	□□□□□ -1.71
RSA3	YLR221C	TAE1	P38340	232 aa		4.37	□□□□□ -1.71
RSA3	YLR221C	ECM34	P38728	170 aa		4.37	□□□□□ -1.71
RSA3	YLR221C	PET8	P38921	284 aa		4.37	□□□□□ -1.71
RSA3	YLR221C	VIK1	Q12045	647 aa		4.37	□□□□□ -1.71
RSA3	YLR221C	YUH1	P35127	236 aa		4.36	□□□□□ -1.71
RSA3	YLR221C	YPC1	P38298	316 aa		4.36	□□□□□ -1.71
RSA3	YLR221C	SHQ1	P40486	507 aa	Predicted RBP	4.36	□□□□□ -1.71
RSA3	YLR221C	VHS1	Q03785	461 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms