RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W PRM4Q12498 284 aa1.4□□□□□ -2.19
URM1YIL008W NBL1Q3E7Y6 73 aa1.4□□□□□ -2.19
URM1YIL008W STE3P06783 470 aa1.39□□□□□ -2.19
URM1YIL008W MET2P08465 486 aa1.39□□□□□ -2.19
URM1YIL008W CIN8P27895 1000 aa1.39□□□□□ -2.19
URM1YIL008W BUD2P33314 1104 aa1.39□□□□□ -2.19
URM1YIL008W MYO3P36006 1272 aa1.39□□□□□ -2.19
URM1YIL008W MED8P38304 223 aa1.39□□□□□ -2.19
URM1YIL008W YNL143CP53908 130 aa1.39□□□□□ -2.19
URM1YIL008W MIM1Q08176 113 aa1.39□□□□□ -2.19
URM1YIL008W IES3Q12345 250 aa1.39□□□□□ -2.19
URM1YIL008W TRM10Q12400 293 aa1.39□□□□□ -2.19
URM1YIL008W TFC7Q12415 435 aa1.39□□□□□ -2.19
URM1YIL008W RGS2Q99188 309 aa1.39□□□□□ -2.19
URM1YIL008W PHO84P25297 587 aaKnown RBP1.38□□□□□ -2.19
URM1YIL008W CSE1P33307 960 aa1.38□□□□□ -2.19
URM1YIL008W YKR032WP36127 104 aa1.38□□□□□ -2.19
URM1YIL008W CTM1P38818 585 aa1.38□□□□□ -2.19
URM1YIL008W ALP1P38971 573 aa1.38□□□□□ -2.19
URM1YIL008W BTT1P40314 149 aaPredicted RBP1.38□□□□□ -2.19
URM1YIL008W ECO1P43605 281 aa1.38□□□□□ -2.19
URM1YIL008W ACT1P60010 375 aaKnown RBP1.38□□□□□ -2.19
URM1YIL008W YPL080CQ02826 108 aa1.38□□□□□ -2.19
URM1YIL008W YDR114CQ04597 100 aa1.38□□□□□ -2.19
URM1YIL008W RDL2Q08742 149 aaKnown RBP1.38□□□□□ -2.19
URM1YIL008W YPL245WQ12179 454 aaKnown RBP1.38□□□□□ -2.19
URM1YIL008W TCB3Q03640 1545 aaKnown RBP1.37□□□□□ -2.19
URM1YIL008W TDH2P00358 332 aaKnown RBP1.37□□□□□ -2.19
URM1YIL008W TDH3P00359 332 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
URM1YIL008W SPS100P13130 326 aa1.37□□□□□ -2.19
URM1YIL008W RBK1P25332 333 aa1.37□□□□□ -2.19
URM1YIL008W MEI5P32489 222 aa1.37□□□□□ -2.19
URM1YIL008W PRP39P39682 629 aaKnown RBP1.37□□□□□ -2.19
URM1YIL008W PXR1P53335 271 aaPredicted RBP1.37□□□□□ -2.19
URM1YIL008W YNR066CP53752 436 aa1.37□□□□□ -2.19
URM1YIL008W AQR1P53943 586 aa1.37□□□□□ -2.19
URM1YIL008W MIX17Q03667 156 aa1.37□□□□□ -2.19
URM1YIL008W ERP3Q12403 225 aa1.37□□□□□ -2.19
URM1YIL008W CBP2P03874 630 aaPredicted RBP1.36□□□□□ -2.19
URM1YIL008W KRE1P17260 313 aa1.36□□□□□ -2.19
URM1YIL008W RSA4P25382 515 aaKnown RBP1.36□□□□□ -2.19
URM1YIL008W LAS1P36146 502 aaPredicted RBP1.36□□□□□ -2.19
URM1YIL008W EDC2P40023 145 aaPredicted RBP1.36□□□□□ -2.19
URM1YIL008W YIL089WP40500 205 aa1.36□□□□□ -2.19
URM1YIL008W FYV8P46949 817 aaKnown RBP1.36□□□□□ -2.19
URM1YIL008W TAF6P53040 516 aa1.36□□□□□ -2.19
URM1YIL008W YNL146WP53906 100 aa1.36□□□□□ -2.19
URM1YIL008W YNL040WP53960 456 aaPredicted RBP1.36□□□□□ -2.19
URM1YIL008W ECM5Q03214 1411 aa1.36□□□□□ -2.19
URM1YIL008W RCF1Q03713 159 aa1.36□□□□□ -2.19
URM1YIL008W DBP9Q06218 594 aaKnown RBP1.36□□□□□ -2.19
URM1YIL008W YLR012CQ07927 99 aa1.36□□□□□ -2.19
URM1YIL008W CLP1Q08685 445 aaPredicted RBP1.36□□□□□ -2.19
URM1YIL008W MRX4Q12467 430 aa1.36□□□□□ -2.19
URM1YIL008W VMA5P31412 392 aaKnown RBP1.35□□□□□ -2.19
URM1YIL008W ACB1P31787 87 aa1.35□□□□□ -2.19
URM1YIL008W SUR1P33300 382 aa1.35□□□□□ -2.19
URM1YIL008W ATG12P38316 186 aa1.35□□□□□ -2.19
URM1YIL008W PET8P38921 284 aa1.35□□□□□ -2.19
URM1YIL008W YGL114WP53134 725 aa1.35□□□□□ -2.19
URM1YIL008W CUE3P53137 624 aaKnown RBP1.35□□□□□ -2.19
URM1YIL008W SPO24Q3E752 67 aa1.35□□□□□ -2.19
URM1YIL008W TY1B-DR4Q07793 1604 aa1.35□□□□□ -2.19
URM1YIL008W TAL1P15019 335 aaKnown RBP1.34□□□□□ -2.19
URM1YIL008W VPH2P32341 215 aa1.34□□□□□ -2.19
URM1YIL008W YGP1P38616 354 aaKnown RBP1.34□□□□□ -2.19
URM1YIL008W YER084WP40057 128 aa1.34□□□□□ -2.19
URM1YIL008W UFD1P53044 361 aa1.34□□□□□ -2.19
URM1YIL008W YGR016WP53209 190 aa1.34□□□□□ -2.19
URM1YIL008W RGM1Q00453 211 aa1.34□□□□□ -2.19
URM1YIL008W RVB1Q03940 463 aaKnown RBP1.34□□□□□ -2.19
URM1YIL008W PEX30Q06169 523 aa1.34□□□□□ -2.19
URM1YIL008W CDD1Q06549 142 aa1.34□□□□□ -2.19
URM1YIL008W YOR292CQ08743 309 aa1.34□□□□□ -2.19
URM1YIL008W YDR262WQ12331 272 aa1.34□□□□□ -2.19
URM1YIL008W YOL163WP0CF20 169 aa1.33□□□□□ -2.2
URM1YIL008W ERD1P16151 362 aa1.33□□□□□ -2.2
URM1YIL008W SNF6P18888 332 aa1.33□□□□□ -2.2
URM1YIL008W PRE7P23724 241 aaKnown RBP1.33□□□□□ -2.2
URM1YIL008W POT1P27796 417 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
URM1YIL008W AIM29P36154 155 aa1.33□□□□□ -2.2
URM1YIL008W UBX2Q04228 584 aa1.33□□□□□ -2.2
URM1YIL008W BUR2Q05949 395 aa1.33□□□□□ -2.2
URM1YIL008W FEX1Q08913 375 aa1.33□□□□□ -2.2
URM1YIL008W FEX2Q08991 375 aa1.33□□□□□ -2.2
URM1YIL008W VIK1Q12045 647 aa1.33□□□□□ -2.2
URM1YIL008W NFI1Q12216 726 aa1.33□□□□□ -2.2
URM1YIL008W YAK1P14680 807 aa1.32□□□□□ -2.2
URM1YIL008W CDC42P19073 191 aa1.32□□□□□ -2.2
URM1YIL008W SIF2P38262 535 aa1.32□□□□□ -2.2
URM1YIL008W PCL7P40186 285 aa1.32□□□□□ -2.2
URM1YIL008W SEC13Q04491 297 aaKnown RBP1.32□□□□□ -2.2
URM1YIL008W ARC18Q05933 178 aaKnown RBP1.32□□□□□ -2.2
URM1YIL008W BUD4P47136 1447 aa1.32□□□□□ -2.2
URM1YIL008W SPT6P23615 1451 aaKnown RBP1.31□□□□□ -2.2
URM1YIL008W REV3P14284 1504 aa1.31□□□□□ -2.2
URM1YIL008W VPS1P21576 704 aaKnown RBP1.31□□□□□ -2.2
URM1YIL008W MRPL6P32904 214 aa1.31□□□□□ -2.2
URM1YIL008W YBL081WP38180 368 aaKnown RBP1.31□□□□□ -2.2
URM1YIL008W YHL044WP38727 235 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 91.1 ms