RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C MDM34P53083 459 aa2.93□□□□□ -1.94
RPN1YHR027C MTL1P53214 551 aa2.93□□□□□ -1.94
RPN1YHR027C ATF2P53296 535 aa2.93□□□□□ -1.94
RPN1YHR027C YNL134CP53912 376 aaKnown RBP2.93□□□□□ -1.94
RPN1YHR027C NRK1P53915 240 aa2.93□□□□□ -1.94
RPN1YHR027C RHO4Q00246 291 aa2.93□□□□□ -1.94
RPN1YHR027C EKI1Q03764 534 aa2.93□□□□□ -1.94
RPN1YHR027C YMR253CQ04835 414 aa2.93□□□□□ -1.94
RPN1YHR027C YLR455WQ06188 304 aa2.93□□□□□ -1.94
RPN1YHR027C CTS2Q06350 511 aa2.93□□□□□ -1.94
RPN1YHR027C TEN1Q07921 160 aa2.93□□□□□ -1.94
RPN1YHR027C YOL131WQ08270 108 aa2.93□□□□□ -1.94
RPN1YHR027C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
RPN1YHR027C TFC7Q12415 435 aa2.93□□□□□ -1.94
RPN1YHR027C THP2O13539 261 aaKnown RBP2.92□□□□□ -1.94
RPN1YHR027C PEP4P07267 405 aaKnown RBP2.92□□□□□ -1.94
RPN1YHR027C ERG20P08524 352 aaKnown RBP2.92□□□□□ -1.94
RPN1YHR027C SEC22P22214 214 aa2.92□□□□□ -1.94
RPN1YHR027C GAC1P28006 793 aa2.92□□□□□ -1.94
RPN1YHR027C TRS65P32893 560 aa2.92□□□□□ -1.94
RPN1YHR027C ASH1P34233 588 aa2.92□□□□□ -1.94
RPN1YHR027C YCR087C-AP37263 153 aa2.92□□□□□ -1.94
RPN1YHR027C POP8P38208 133 aa2.92□□□□□ -1.94
RPN1YHR027C RCR1P38212 213 aa2.92□□□□□ -1.94
RPN1YHR027C YBR096WP38256 230 aa2.92□□□□□ -1.94
RPN1YHR027C SKN7P38889 622 aa2.92□□□□□ -1.94
RPN1YHR027C GAA1P39012 614 aa2.92□□□□□ -1.94
RPN1YHR027C XDJ1P39102 459 aa2.92□□□□□ -1.94
RPN1YHR027C RRD1P40454 393 aaKnown RBP2.92□□□□□ -1.94
RPN1YHR027C BMT5P40493 336 aa2.92□□□□□ -1.94
RPN1YHR027C IME4P41833 600 aa2.92□□□□□ -1.94
RPN1YHR027C YJL171CP46992 396 aa2.92□□□□□ -1.94
RPN1YHR027C SDT1P53078 280 aa2.92□□□□□ -1.94
RPN1YHR027C TIM21P53220 239 aa2.92□□□□□ -1.94
RPN1YHR027C BUD17P53727 317 aa2.92□□□□□ -1.94
RPN1YHR027C APM1Q00776 475 aaPredicted RBP2.92□□□□□ -1.94
RPN1YHR027C AAT1Q01802 451 aa2.92□□□□□ -1.94
RPN1YHR027C NUP100Q02629 959 aa2.92□□□□□ -1.94
RPN1YHR027C GIP3Q03016 1276 aa2.92□□□□□ -1.94
RPN1YHR027C MSS11Q03825 758 aa2.92□□□□□ -1.94
RPN1YHR027C CSM3Q04659 317 aa2.92□□□□□ -1.94
RPN1YHR027C YMR315WQ04869 349 aaKnown RBP2.92□□□□□ -1.94
RPN1YHR027C HRD1Q08109 551 aa2.92□□□□□ -1.94
RPN1YHR027C YPL257WQ08974 193 aa2.92□□□□□ -1.94
RPN1YHR027C COX5BP00425 151 aa2.92□□□□□ -1.94
RPN1YHR027C NUP1P20676 1076 aa2.92□□□□□ -1.94
RPN1YHR027C SDH2P21801 266 aa2.92□□□□□ -1.94
RPN1YHR027C URA10P30402 227 aa2.92□□□□□ -1.94
RPN1YHR027C SYN8P31377 255 aa2.92□□□□□ -1.94
RPN1YHR027C STE14P32584 239 aa2.92□□□□□ -1.94
RPN1YHR027C RML2P32611 393 aa2.92□□□□□ -1.94
RPN1YHR027C VBA5P36172 582 aa2.92□□□□□ -1.94
RPN1YHR027C YBR284WP38150 797 aa2.92□□□□□ -1.94
RPN1YHR027C YPC1P38298 316 aa2.92□□□□□ -1.94
RPN1YHR027C GCV3P39726 170 aaPredicted RBP2.92□□□□□ -1.94
RPN1YHR027C KHA1P40309 873 aa2.92□□□□□ -1.94
RPN1YHR027C ALK1P43633 760 aaKnown RBP2.92□□□□□ -1.94
RPN1YHR027C CHA4P43634 648 aa2.92□□□□□ -1.94
RPN1YHR027C BIT61P47041 543 aa2.92□□□□□ -1.94
RPN1YHR027C SKP1P52286 194 aa2.92□□□□□ -1.94
RPN1YHR027C COQ6P53318 479 aa2.92□□□□□ -1.94
RPN1YHR027C YNR066CP53752 436 aa2.92□□□□□ -1.94
RPN1YHR027C DIA1P54005 336 aa2.92□□□□□ -1.94
RPN1YHR027C YDR366CP87287 132 aa2.92□□□□□ -1.94
RPN1YHR027C PRP38Q00723 242 aaPredicted RBP2.92□□□□□ -1.94
RPN1YHR027C YPL067CQ02754 198 aa2.92□□□□□ -1.94
RPN1YHR027C YDR391CQ04170 232 aa2.92□□□□□ -1.94
RPN1YHR027C YPR109WQ06104 294 aa2.92□□□□□ -1.94
RPN1YHR027C PEX30Q06169 523 aa2.92□□□□□ -1.94
RPN1YHR027C PUS5Q06244 254 aa2.92□□□□□ -1.94
RPN1YHR027C AIM39Q08223 395 aa2.92□□□□□ -1.94
RPN1YHR027C YLR049CQ12110 428 aa2.92□□□□□ -1.94
RPN1YHR027C TPO4Q12256 659 aa2.92□□□□□ -1.94
RPN1YHR027C RDL1Q12305 139 aaKnown RBP2.92□□□□□ -1.94
RPN1YHR027C MHF2Q3E829 80 aa2.92□□□□□ -1.94
RPN1YHR027C YPR170W-BP0C5R9 85 aa2.91□□□□□ -1.94
RPN1YHR027C YCP4P25349 247 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C STP22P25604 385 aa2.91□□□□□ -1.94
RPN1YHR027C YCR015CP25616 317 aa2.91□□□□□ -1.94
RPN1YHR027C ATG15P25641 520 aa2.91□□□□□ -1.94
RPN1YHR027C SSH4P32343 579 aa2.91□□□□□ -1.94
RPN1YHR027C RIM1P32445 135 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C SFK1P35735 353 aa2.91□□□□□ -1.94
RPN1YHR027C ICS2P38284 255 aa2.91□□□□□ -1.94
RPN1YHR027C AME1P38313 324 aa2.91□□□□□ -1.94
RPN1YHR027C URA8P38627 578 aaPredicted RBP2.91□□□□□ -1.94
RPN1YHR027C DBP8P38719 431 aa2.91□□□□□ -1.94
RPN1YHR027C ALP1P38971 573 aa2.91□□□□□ -1.94
RPN1YHR027C HEM14P40012 539 aa2.91□□□□□ -1.94
RPN1YHR027C SPO73P40031 143 aa2.91□□□□□ -1.94
RPN1YHR027C ELO3P40319 345 aa2.91□□□□□ -1.94
RPN1YHR027C EXG2P52911 562 aa2.91□□□□□ -1.94
RPN1YHR027C COS10P52924 374 aa2.91□□□□□ -1.94
RPN1YHR027C FLC3P53121 802 aa2.91□□□□□ -1.94
RPN1YHR027C YNR061CP53747 219 aa2.91□□□□□ -1.94
RPN1YHR027C DUS1P53759 423 aaKnown RBP2.91□□□□□ -1.94
RPN1YHR027C TIM8P57744 87 aa2.91□□□□□ -1.94
RPN1YHR027C YSA1Q01976 231 aa2.91□□□□□ -1.94
RPN1YHR027C MET14Q02196 202 aa2.91□□□□□ -1.94
RPN1YHR027C VPS28Q02767 242 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms